RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 TICAM2Q86XR7 235 aa9.41□□□□□ -0.9
LINC00649-203ENST00000427447 ZBTB12Q9Y330 459 aaPredicted RBP9.41□□□□□ -0.9
LINC00649-203ENST00000427447 MRE11P49959 708 aa9.41□□□□□ -0.9
LINC00649-203ENST00000427447 EZRP15311 586 aaKnown RBP9.41□□□□□ -0.9
LINC00649-203ENST00000427447 SEPT7Q16181 437 aaKnown RBP9.41□□□□□ -0.9
LINC00649-203ENST00000427447 DBN1Q16643 649 aa9.41□□□□□ -0.9
LINC00649-203ENST00000427447 DNAJC21Q5F1R6 531 aaKnown RBP9.41□□□□□ -0.9
LINC00649-203ENST00000427447 MKL2Q9ULH7 1088 aa9.4□□□□□ -0.9
LINC00649-203ENST00000427447 KLHL10Q6JEL2 608 aa9.4□□□□□ -0.9
LINC00649-203ENST00000427447 RABEP1Q15276 862 aa9.4□□□□□ -0.9
LINC00649-203ENST00000427447 ANKRD20A12PQ8NF67 263 aa9.4□□□□□ -0.9
LINC00649-203ENST00000427447 KIF20AO95235 890 aa9.4□□□□□ -0.9
LINC00649-203ENST00000427447 CT47B1P0C2W7 299 aaPredicted RBP9.4□□□□□ -0.9
LINC00649-203ENST00000427447 AP1ARQ63HQ0 302 aa9.4□□□□□ -0.9
LINC00649-203ENST00000427447 LCA5Q86VQ0 697 aa9.4□□□□□ -0.91
LINC00649-203ENST00000427447 RBBP5Q15291 538 aaKnown RBP9.4□□□□□ -0.91
LINC00649-203ENST00000427447 CNPY4Q8N129 248 aa9.39□□□□□ -0.91
LINC00649-203ENST00000427447 MYCBPQ99417 103 aaPredicted RBP9.39□□□□□ -0.91
LINC00649-203ENST00000427447 ATP6V1DQ9Y5K8 247 aa9.39□□□□□ -0.91
LINC00649-203ENST00000427447 ERLIN1O75477 346 aa9.39□□□□□ -0.91
LINC00649-203ENST00000427447 PDCD7Q8N8D1 485 aaKnown RBP9.39□□□□□ -0.91
LINC00649-203ENST00000427447 STAG3Q9UJ98 1225 aa9.38□□□□□ -0.91
LINC00649-203ENST00000427447 SLC26A8Q96RN1 970 aa9.38□□□□□ -0.91
LINC00649-203ENST00000427447 RNF8O76064 485 aa9.38□□□□□ -0.91
LINC00649-203ENST00000427447 ZFYP08048 801 aaPredicted RBP9.38□□□□□ -0.91
LINC00649-203ENST00000427447 SLMAPQ14BN4 828 aa9.38□□□□□ -0.91
LINC00649-203ENST00000427447 C10orf67Q8IYJ2 551 aa9.38□□□□□ -0.91
LINC00649-203ENST00000427447 CDK5RAP3Q96JB5 506 aa9.38□□□□□ -0.91
LINC00649-203ENST00000427447 FEZ1Q99689 392 aa9.38□□□□□ -0.91
LINC00649-203ENST00000427447 KIF3BO15066 747 aa9.38□□□□□ -0.91
LINC00649-203ENST00000427447 NUCB2P80303 420 aa9.38□□□□□ -0.91
LINC00649-203ENST00000427447 HOMER1Q86YM7 354 aa9.38□□□□□ -0.91
LINC00649-203ENST00000427447 R3HCC1Q9Y3T6 440 aaKnown RBP9.38□□□□□ -0.91
LINC00649-203ENST00000427447 SYCP1Q15431 976 aa9.37□□□□□ -0.91
LINC00649-203ENST00000427447 RBM26Q5T8P6 1007 aaKnown RBP9.37□□□□□ -0.91
LINC00649-203ENST00000427447 DDX12PQ92771 950 aa9.37□□□□□ -0.91
LINC00649-203ENST00000427447 WWC3Q9ULE0 1092 aa9.37□□□□□ -0.91
LINC00649-203ENST00000427447 ZC4H2Q9NQZ6 224 aa9.37□□□□□ -0.91
LINC00649-203ENST00000427447 TSHZ2Q9NRE2 1034 aa9.37□□□□□ -0.91
LINC00649-203ENST00000427447 IVLP07476 585 aa9.37□□□□□ -0.91
LINC00649-203ENST00000427447 ANKRD18AQ8IVF6 992 aa9.37□□□□□ -0.91
LINC00649-203ENST00000427447 BLVRAP53004 296 aa9.37□□□□□ -0.91
LINC00649-203ENST00000427447 SREK1Q8WXA9 508 aaKnown RBP9.37□□□□□ -0.91
LINC00649-203ENST00000427447 NPM1P06748 294 aaKnown RBP eCLIP9.36□□□□□ -0.91
LINC00649-203ENST00000427447 BTN2A1Q7KYR7 527 aa9.36□□□□□ -0.91
LINC00649-203ENST00000427447 KCNJ4P48050 445 aa9.36□□□□□ -0.91
LINC00649-203ENST00000427447 TAX1BP1Q86VP1 789 aa9.36□□□□□ -0.91
LINC00649-203ENST00000427447 CCDC146Q8IYE0 955 aa9.36□□□□□ -0.91
LINC00649-203ENST00000427447 CEP104O60308 925 aa9.36□□□□□ -0.91
LINC00649-203ENST00000427447 DDX46Q7L014 1031 aaKnown RBP9.36□□□□□ -0.91
LINC00649-203ENST00000427447 NAP1L4Q99733 375 aaKnown RBP9.36□□□□□ -0.91
LINC00649-203ENST00000427447 WDR70Q9NW82 654 aa9.36□□□□□ -0.91
LINC00649-203ENST00000427447 CCDC6Q16204 474 aa9.35□□□□□ -0.91
LINC00649-203ENST00000427447 PRM3Q9NNZ6 103 aa9.35□□□□□ -0.91
LINC00649-203ENST00000427447 RNF214Q8ND24 703 aa9.35□□□□□ -0.91
LINC00649-203ENST00000427447 CHMP4CQ96CF2 233 aa9.35□□□□□ -0.91
LINC00649-203ENST00000427447 RMDN2Q96LZ7 410 aa9.34□□□□□ -0.91
LINC00649-203ENST00000427447 IBSPP21815 317 aaPredicted RBP9.34□□□□□ -0.91
LINC00649-203ENST00000427447 OFD1O75665 1012 aa9.34□□□□□ -0.91
LINC00649-203ENST00000427447 NBPF1Q3BBV0 1214 aa9.34□□□□□ -0.91
LINC00649-203ENST00000427447 PLCD3Q8N3E9 789 aa9.34□□□□□ -0.91
LINC00649-203ENST00000427447 KIAA1211Q6ZU35 1233 aa9.34□□□□□ -0.91
LINC00649-203ENST00000427447 TXLNBQ8N3L3 684 aa9.34□□□□□ -0.91
LINC00649-203ENST00000427447 TMCO4Q5TGY1 634 aa9.33□□□□□ -0.92
LINC00649-203ENST00000427447 MRS2Q9HD23 443 aa9.33□□□□□ -0.92
LINC00649-203ENST00000427447 CEP83Q9Y592 693 aa9.33□□□□□ -0.92
LINC00649-203ENST00000427447 PDILTQ8N807 584 aa9.33□□□□□ -0.92
LINC00649-203ENST00000427447 ERLIN2O94905 339 aa9.33□□□□□ -0.92
LINC00649-203ENST00000427447 POLE3Q9NRF9 147 aa9.33□□□□□ -0.92
LINC00649-203ENST00000427447 CCDC152Q4G0S7 254 aa9.32□□□□□ -0.92
LINC00649-203ENST00000427447 NUTM1Q86Y26 1132 aa9.32□□□□□ -0.92
LINC00649-203ENST00000427447 NUP133Q8WUM0 1156 aa9.32□□□□□ -0.92
LINC00649-203ENST00000427447 CEP63Q96MT8 703 aa9.32□□□□□ -0.92
LINC00649-203ENST00000427447 RSRC1Q96IZ7 334 aaKnown RBP9.32□□□□□ -0.92
LINC00649-203ENST00000427447 BECN2A8MW95 431 aa9.32□□□□□ -0.92
LINC00649-203ENST00000427447 CCDC144CPQ8IYA2 1237 aa9.32□□□□□ -0.92
LINC00649-203ENST00000427447 NUCKS1Q9H1E3 243 aaKnown RBP9.32□□□□□ -0.92
LINC00649-203ENST00000427447 USH1CQ9Y6N9 552 aa9.32□□□□□ -0.92
LINC00649-203ENST00000427447 CCDC65Q8IXS2 484 aa9.32□□□□□ -0.92
LINC00649-203ENST00000427447 GBP3Q9H0R5 595 aa9.32□□□□□ -0.92
LINC00649-203ENST00000427447 PMFBP1Q8TBY8 1022 aa9.31□□□□□ -0.92
LINC00649-203ENST00000427447 USP6NLQ92738 828 aa9.31□□□□□ -0.92
LINC00649-203ENST00000427447 JAKMIP3Q5VZ66 844 aa9.31□□□□□ -0.92
LINC00649-203ENST00000427447 GBP6Q6ZN66 633 aa9.31□□□□□ -0.92
LINC00649-203ENST00000427447 FAM184AQ8NB25 1140 aa9.31□□□□□ -0.92
LINC00649-203ENST00000427447 SEPT8Q92599 483 aa9.31□□□□□ -0.92
LINC00649-203ENST00000427447 IRX6P78412 446 aaPredicted RBP9.31□□□□□ -0.92
LINC00649-203ENST00000427447 GMNNO75496 209 aa9.3□□□□□ -0.92
LINC00649-203ENST00000427447 CEP120Q8N960 986 aa9.3□□□□□ -0.92
LINC00649-203ENST00000427447 GCOM1H8Y6P7 765 aaPredicted RBP9.3□□□□□ -0.92
LINC00649-203ENST00000427447 MYZAPP0CAP1 466 aa9.3□□□□□ -0.92
LINC00649-203ENST00000427447 TTC31Q49AM3 519 aaPredicted RBP9.3□□□□□ -0.92
LINC00649-203ENST00000427447 PRDM10Q9NQV6 1147 aa9.3□□□□□ -0.92
LINC00649-203ENST00000427447 ERICH4A6NGS2 130 aa9.3□□□□□ -0.92
LINC00649-203ENST00000427447 ZNF777Q9ULD5 760 aaPredicted RBP9.3□□□□□ -0.92
LINC00649-203ENST00000427447 SMAP1Q8IYB5 467 aaPredicted RBP9.3□□□□□ -0.92
LINC00649-203ENST00000427447 PPFIA3O75145 1194 aa9.3□□□□□ -0.92
LINC00649-203ENST00000427447 MCM3P25205 808 aa9.3□□□□□ -0.92
LINC00649-203ENST00000427447 CEP135Q66GS9 1140 aa9.29□□□□□ -0.92
LINC00649-203ENST00000427447 TEX2Q8IWB9 1127 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 620.8 ms