RNA–Protein interactions for RNA: ENST00000425942.3

TPM3P4-201, Transcript of tropomyosin 3 pseudogene 4, humanhuman

BASIC

Gene TPM3P4, Length 755 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P4-201ENST00000425942 MNX1P50219 401 aaPredicted RBP13.54□□□□□ -0.24
TPM3P4-201ENST00000425942 RRP7BPQ9NSQ0 103 aa13.54□□□□□ -0.24
TPM3P4-201ENST00000425942 CHIC2Q9UKJ5 165 aa13.54□□□□□ -0.24
TPM3P4-201ENST00000425942 ACIN1Q9UKV3 1341 aaKnown RBP13.54□□□□□ -0.24
TPM3P4-201ENST00000425942 MLECQ14165 292 aa13.53□□□□□ -0.24
TPM3P4-201ENST00000425942 E9PCH4 1651 aa13.51□□□□□ -0.25
TPM3P4-201ENST00000425942 GGT6Q6P531 493 aa13.51□□□□□ -0.25
TPM3P4-201ENST00000425942 SPHKAPQ2M3C7 1700 aa13.5□□□□□ -0.25
TPM3P4-201ENST00000425942 CEP170BQ9Y4F5 1589 aaPredicted RBP13.49□□□□□ -0.25
TPM3P4-201ENST00000425942 ZMYM3Q14202 1370 aa13.49□□□□□ -0.25
TPM3P4-201ENST00000425942 ERVK-7P63135 1459 aa13.48□□□□□ -0.25
TPM3P4-201ENST00000425942 UHRF1BP1Q6BDS2 1440 aa13.48□□□□□ -0.25
TPM3P4-201ENST00000425942 WASHC2CQ9Y4E1 1318 aa13.48□□□□□ -0.25
TPM3P4-201ENST00000425942 ITGAEP38570 1179 aa13.48□□□□□ -0.25
TPM3P4-201ENST00000425942 LMTK3Q96Q04 1460 aa13.48□□□□□ -0.25
TPM3P4-201ENST00000425942 NLRP1Q9C000 1473 aa13.48□□□□□ -0.25
TPM3P4-201ENST00000425942 PIK3C2BO00750 1634 aa13.46□□□□□ -0.25
TPM3P4-201ENST00000425942 POLR1AO95602 1720 aaPredicted RBP13.46□□□□□ -0.25
TPM3P4-201ENST00000425942 CFAP65Q6ZU64 1925 aaKnown RBP13.45□□□□□ -0.26
TPM3P4-201ENST00000425942 SYNMO15061 1565 aa13.45□□□□□ -0.26
TPM3P4-201ENST00000425942 MIER1Q8N108 512 aa13.44□□□□□ -0.26
TPM3P4-201ENST00000425942 SETD5Q9C0A6 1442 aa13.44□□□□□ -0.26
TPM3P4-201ENST00000425942 UBR1Q8IWV7 1749 aa13.44□□□□□ -0.26
TPM3P4-201ENST00000425942 A2ML1A8K2U0 1454 aa13.43□□□□□ -0.26
TPM3P4-201ENST00000425942 TRPM2O94759 1503 aa13.43□□□□□ -0.26
TPM3P4-201ENST00000425942 GABBR2O75899 941 aa13.42□□□□□ -0.26
TPM3P4-201ENST00000425942 ADGRB3O60242 1522 aa13.42□□□□□ -0.26
TPM3P4-201ENST00000425942 TNRQ92752 1358 aa13.42□□□□□ -0.26
TPM3P4-201ENST00000425942 NOS1P29475 1434 aa13.41□□□□□ -0.26
TPM3P4-201ENST00000425942 NUP155O75694 1391 aa13.41□□□□□ -0.26
TPM3P4-201ENST00000425942 PLA2R1Q13018 1463 aa13.41□□□□□ -0.26
TPM3P4-201ENST00000425942 ZRANB1Q9UGI0 708 aa13.4□□□□□ -0.26
TPM3P4-201ENST00000425942 UGGT1Q9NYU2 1555 aa13.4□□□□□ -0.26
TPM3P4-201ENST00000425942 KIF1BO60333 1816 aa13.39□□□□□ -0.27
TPM3P4-201ENST00000425942 MYO5BQ9ULV0 1848 aa13.37□□□□□ -0.27
TPM3P4-201ENST00000425942 RAB3GAP2Q9H2M9 1393 aa13.37□□□□□ -0.27
TPM3P4-201ENST00000425942 STRCQ7RTU9 1775 aa13.36□□□□□ -0.27
TPM3P4-201ENST00000425942 PLCD3Q8N3E9 789 aa13.36□□□□□ -0.27
TPM3P4-201ENST00000425942 NEURL4Q96JN8 1562 aa13.36□□□□□ -0.27
TPM3P4-201ENST00000425942 PLEKHG5O94827 1062 aa13.35□□□□□ -0.27
TPM3P4-201ENST00000425942 HRCP23327 699 aa13.35□□□□□ -0.27
TPM3P4-201ENST00000425942 CEBPAP49715 358 aaPredicted RBP13.35□□□□□ -0.27
TPM3P4-201ENST00000425942 ZNF579Q8NAF0 562 aaKnown RBP13.35□□□□□ -0.27
TPM3P4-201ENST00000425942 PTPRTO14522 1441 aa13.35□□□□□ -0.27
TPM3P4-201ENST00000425942 TMEM131LA2VDJ0 1609 aa13.35□□□□□ -0.27
TPM3P4-201ENST00000425942 CLTCL1P53675 1640 aa13.35□□□□□ -0.27
TPM3P4-201ENST00000425942 SLIT1O75093 1534 aa13.34□□□□□ -0.27
TPM3P4-201ENST00000425942 TRIM26Q12899 539 aaPredicted RBP13.32□□□□□ -0.28
TPM3P4-201ENST00000425942 ARHGAP23Q9P227 1491 aa13.31□□□□□ -0.28
TPM3P4-201ENST00000425942 PAK3O75914 559 aaPredicted RBP13.31□□□□□ -0.28
TPM3P4-201ENST00000425942 FBXO3Q9UK99 471 aa13.31□□□□□ -0.28
TPM3P4-201ENST00000425942 IQGAP1P46940 1657 aa13.31□□□□□ -0.28
TPM3P4-201ENST00000425942 SLC52A1Q9NWF4 448 aa13.3□□□□□ -0.28
TPM3P4-201ENST00000425942 IFT172Q9UG01 1749 aa13.3□□□□□ -0.28
TPM3P4-201ENST00000425942 FBXO31Q5XUX0 539 aaPredicted RBP13.29□□□□□ -0.28
TPM3P4-201ENST00000425942 TRIM52Q96A61 297 aa13.28□□□□□ -0.28
TPM3P4-201ENST00000425942 MED14O60244 1454 aa13.28□□□□□ -0.28
TPM3P4-201ENST00000425942 PPLO60437 1756 aa13.27□□□□□ -0.28
TPM3P4-201ENST00000425942 DIP2AQ14689 1571 aa13.26□□□□□ -0.29
TPM3P4-201ENST00000425942 PHF12Q96QT6 1004 aa13.26□□□□□ -0.29
TPM3P4-201ENST00000425942 SCAF11Q99590 1463 aaKnown RBP13.26□□□□□ -0.29
TPM3P4-201ENST00000425942 CCDC144AA2RUR9 1427 aa13.25□□□□□ -0.29
TPM3P4-201ENST00000425942 THEMISQ8N1K5 641 aaPredicted RBP13.24□□□□□ -0.29
TPM3P4-201ENST00000425942 TSPYL2Q9H2G4 693 aaPredicted RBP13.24□□□□□ -0.29
TPM3P4-201ENST00000425942 ZFYVE9O95405 1425 aa13.23□□□□□ -0.29
TPM3P4-201ENST00000425942 TMEM2Q9UHN6 1383 aa13.23□□□□□ -0.29
TPM3P4-201ENST00000425942 CLCN6P51797 869 aa13.23□□□□□ -0.29
TPM3P4-201ENST00000425942 PKD2Q13563 968 aa13.23□□□□□ -0.29
TPM3P4-201ENST00000425942 NEXMIFQ5QGS0 1516 aa13.23□□□□□ -0.29
TPM3P4-201ENST00000425942 RASEFQ8IZ41 740 aa13.22□□□□□ -0.29
TPM3P4-201ENST00000425942 MPHOSPH9Q99550 1183 aa13.22□□□□□ -0.29
TPM3P4-201ENST00000425942 LAMC1P11047 1609 aa13.21□□□□□ -0.3
TPM3P4-201ENST00000425942 SETBP1Q9Y6X0 1596 aa13.2□□□□□ -0.3
TPM3P4-201ENST00000425942 GALR2O43603 387 aaPredicted RBP13.2□□□□□ -0.3
TPM3P4-201ENST00000425942 IDI1Q13907 227 aa13.2□□□□□ -0.3
TPM3P4-201ENST00000425942 ZBTB47Q9UFB7 747 aaPredicted RBP13.2□□□□□ -0.3
TPM3P4-201ENST00000425942 VASPP50552 380 aaPredicted RBP13.19□□□□□ -0.3
TPM3P4-201ENST00000425942 HSPA2P54652 639 aa13.19□□□□□ -0.3
TPM3P4-201ENST00000425942 NPHP4O75161 1426 aaPredicted RBP13.19□□□□□ -0.3
TPM3P4-201ENST00000425942 RIMS2Q9UQ26 1411 aa13.18□□□□□ -0.3
TPM3P4-201ENST00000425942 NWD1Q149M9 1564 aa13.18□□□□□ -0.3
TPM3P4-201ENST00000425942 NRXN3Q9Y4C0 1643 aa13.17□□□□□ -0.3
TPM3P4-201ENST00000425942 SETD1AO15047 1707 aaKnown RBP13.17□□□□□ -0.3
TPM3P4-201ENST00000425942 SPATA31E1Q6ZUB1 1445 aa13.17□□□□□ -0.3
TPM3P4-201ENST00000425942 POTEIP0CG38 1075 aa13.17□□□□□ -0.3
TPM3P4-201ENST00000425942 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
TPM3P4-201ENST00000425942 ANKRD30BQ9BXX2 1392 aa13.17□□□□□ -0.3
TPM3P4-201ENST00000425942 MYOM2P54296 1465 aa13.16□□□□□ -0.3
TPM3P4-201ENST00000425942 NUBP1P53384 320 aa13.16□□□□□ -0.3
TPM3P4-201ENST00000425942 ANKLE2Q86XL3 938 aa13.16□□□□□ -0.3
TPM3P4-201ENST00000425942 EID1Q9Y6B2 187 aa13.16□□□□□ -0.3
TPM3P4-201ENST00000425942 PLEKHG1Q9ULL1 1385 aa13.16□□□□□ -0.3
TPM3P4-201ENST00000425942 HDGFP51858 240 aaKnown RBP13.15□□□□□ -0.3
TPM3P4-201ENST00000425942 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.15□□□□□ -0.3
TPM3P4-201ENST00000425942 CPS1P31327 1500 aa13.14□□□□□ -0.31
TPM3P4-201ENST00000425942 CHD2O14647 1828 aaKnown RBP13.14□□□□□ -0.31
TPM3P4-201ENST00000425942 IQSEC2Q5JU85 1478 aa13.14□□□□□ -0.31
TPM3P4-201ENST00000425942 RPGRIP1LQ68CZ1 1315 aa13.13□□□□□ -0.31
TPM3P4-201ENST00000425942 NKTRP30414 1462 aaKnown RBP13.12□□□□□ -0.31
TPM3P4-201ENST00000425942 DHX57Q6P158 1386 aaKnown RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms