RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 VWDEQ8N2E2 1590 aa10.58□□□□□ -0.72
CHCHD3P1-201ENST00000425516 PRDM15P57071 1507 aaPredicted RBP10.58□□□□□ -0.72
CHCHD3P1-201ENST00000425516 RAB3GAP2Q9H2M9 1393 aa10.57□□□□□ -0.72
CHCHD3P1-201ENST00000425516 FAM135AQ9P2D6 1515 aa10.57□□□□□ -0.72
CHCHD3P1-201ENST00000425516 UNC13BO14795 1591 aa10.56□□□□□ -0.72
CHCHD3P1-201ENST00000425516 MADDQ8WXG6 1647 aa10.56□□□□□ -0.72
CHCHD3P1-201ENST00000425516 FAM212AQ96EL1 285 aa10.56□□□□□ -0.72
CHCHD3P1-201ENST00000425516 ABCC3O15438 1527 aa10.56□□□□□ -0.72
CHCHD3P1-201ENST00000425516 CNTLNQ9NXG0 1405 aa10.56□□□□□ -0.72
CHCHD3P1-201ENST00000425516 WASHC2CQ9Y4E1 1318 aa10.56□□□□□ -0.72
CHCHD3P1-201ENST00000425516 LMTK2Q8IWU2 1503 aa10.55□□□□□ -0.72
CHCHD3P1-201ENST00000425516 DCAF8Q5TAQ9 597 aa10.55□□□□□ -0.72
CHCHD3P1-201ENST00000425516 NUP155O75694 1391 aa10.54□□□□□ -0.72
CHCHD3P1-201ENST00000425516 ZMYM3Q14202 1370 aa10.54□□□□□ -0.72
CHCHD3P1-201ENST00000425516 KANK1Q14678 1352 aa10.54□□□□□ -0.72
CHCHD3P1-201ENST00000425516 PYGBP11216 843 aa10.54□□□□□ -0.72
CHCHD3P1-201ENST00000425516 PTPRMP28827 1452 aa10.54□□□□□ -0.72
CHCHD3P1-201ENST00000425516 ACIN1Q9UKV3 1341 aaKnown RBP10.54□□□□□ -0.72
CHCHD3P1-201ENST00000425516 ARHGAP31Q2M1Z3 1444 aa10.53□□□□□ -0.72
CHCHD3P1-201ENST00000425516 FER1L4A9Z1Z3 1794 aa10.53□□□□□ -0.72
CHCHD3P1-201ENST00000425516 PELP1Q8IZL8 1130 aaKnown RBP10.53□□□□□ -0.72
CHCHD3P1-201ENST00000425516 PCGF6Q9BYE7 350 aa10.53□□□□□ -0.72
CHCHD3P1-201ENST00000425516 PZPP20742 1482 aa10.53□□□□□ -0.72
CHCHD3P1-201ENST00000425516 CLTCQ00610 1675 aaKnown RBP10.53□□□□□ -0.72
CHCHD3P1-201ENST00000425516 IQGAP3Q86VI3 1631 aa10.52□□□□□ -0.73
CHCHD3P1-201ENST00000425516 CEBPAP49715 358 aaPredicted RBP10.52□□□□□ -0.73
CHCHD3P1-201ENST00000425516 SPOCK2Q92563 424 aa10.52□□□□□ -0.73
CHCHD3P1-201ENST00000425516 ESF1Q9H501 851 aaKnown RBP10.52□□□□□ -0.73
CHCHD3P1-201ENST00000425516 MROH2AA6NES4 1674 aa10.52□□□□□ -0.73
CHCHD3P1-201ENST00000425516 ZC3H13Q5T200 1668 aaKnown RBP10.52□□□□□ -0.73
CHCHD3P1-201ENST00000425516 RIMS1Q86UR5 1692 aaKnown RBP10.52□□□□□ -0.73
CHCHD3P1-201ENST00000425516 CEP152O94986 1710 aa10.51□□□□□ -0.73
CHCHD3P1-201ENST00000425516 TRIM52Q96A61 297 aa10.51□□□□□ -0.73
CHCHD3P1-201ENST00000425516 CLCN6P51797 869 aa10.5□□□□□ -0.73
CHCHD3P1-201ENST00000425516 FBXO31Q5XUX0 539 aaPredicted RBP10.5□□□□□ -0.73
CHCHD3P1-201ENST00000425516 DCBLD2Q96PD2 775 aa10.5□□□□□ -0.73
CHCHD3P1-201ENST00000425516 NPATQ14207 1427 aa10.5□□□□□ -0.73
CHCHD3P1-201ENST00000425516 EFCAB6Q5THR3 1501 aa10.49□□□□□ -0.73
CHCHD3P1-201ENST00000425516 CAMSAP1Q5T5Y3 1602 aa10.49□□□□□ -0.73
CHCHD3P1-201ENST00000425516 IFNL1Q8IU54 200 aa10.49□□□□□ -0.73
CHCHD3P1-201ENST00000425516 MPHOSPH9Q99550 1183 aa10.49□□□□□ -0.73
CHCHD3P1-201ENST00000425516 TET3O43151 1660 aa10.49□□□□□ -0.73
CHCHD3P1-201ENST00000425516 C3P01024 1663 aa10.49□□□□□ -0.73
CHCHD3P1-201ENST00000425516 PCDHB13Q9Y5F0 798 aa10.48□□□□□ -0.73
CHCHD3P1-201ENST00000425516 RPRD2Q5VT52 1461 aaKnown RBP10.48□□□□□ -0.73
CHCHD3P1-201ENST00000425516 PKD2Q13563 968 aa10.47□□□□□ -0.73
CHCHD3P1-201ENST00000425516 NOS1P29475 1434 aa10.47□□□□□ -0.73
CHCHD3P1-201ENST00000425516 PTPRTO14522 1441 aa10.46□□□□□ -0.74
CHCHD3P1-201ENST00000425516 ERVK-7P63135 1459 aa10.46□□□□□ -0.74
CHCHD3P1-201ENST00000425516 SPATA31D1Q6ZQQ2 1576 aa10.46□□□□□ -0.74
CHCHD3P1-201ENST00000425516 E9PCH4 1651 aa10.46□□□□□ -0.74
CHCHD3P1-201ENST00000425516 PLA2R1Q13018 1463 aa10.45□□□□□ -0.74
CHCHD3P1-201ENST00000425516 ATMINO43313 823 aaPredicted RBP10.45□□□□□ -0.74
CHCHD3P1-201ENST00000425516 BMP2KQ9NSY1 1161 aaPredicted RBP10.45□□□□□ -0.74
CHCHD3P1-201ENST00000425516 ATN1P54259 1190 aaPredicted RBP10.44□□□□□ -0.74
CHCHD3P1-201ENST00000425516 ASTLQ6HA08 431 aaPredicted RBP10.44□□□□□ -0.74
CHCHD3P1-201ENST00000425516 CIZ1Q9ULV3 898 aaPredicted RBP10.44□□□□□ -0.74
CHCHD3P1-201ENST00000425516 PCDHB8Q9UN66 801 aa10.44□□□□□ -0.74
CHCHD3P1-201ENST00000425516 PREX1Q8TCU6 1659 aa10.44□□□□□ -0.74
CHCHD3P1-201ENST00000425516 TNRQ92752 1358 aa10.43□□□□□ -0.74
CHCHD3P1-201ENST00000425516 SYNMO15061 1565 aa10.43□□□□□ -0.74
CHCHD3P1-201ENST00000425516 SETD1BQ9UPS6 1966 aaKnown RBP10.43□□□□□ -0.74
CHCHD3P1-201ENST00000425516 IDI1Q13907 227 aa10.42□□□□□ -0.74
CHCHD3P1-201ENST00000425516 DHX57Q6P158 1386 aaKnown RBP10.41□□□□□ -0.74
CHCHD3P1-201ENST00000425516 ANKRD30BQ9BXX2 1392 aa10.41□□□□□ -0.74
CHCHD3P1-201ENST00000425516 CFAP65Q6ZU64 1925 aaKnown RBP10.41□□□□□ -0.74
CHCHD3P1-201ENST00000425516 GSE1Q14687 1217 aa10.41□□□□□ -0.74
CHCHD3P1-201ENST00000425516 SLC52A1Q9NWF4 448 aa10.41□□□□□ -0.74
CHCHD3P1-201ENST00000425516 NLRP1Q9C000 1473 aa10.4□□□□□ -0.74
CHCHD3P1-201ENST00000425516 TTLL13PA6NNM8 815 aa10.39□□□□□ -0.75
CHCHD3P1-201ENST00000425516 PIK3C2BO00750 1634 aa10.39□□□□□ -0.75
CHCHD3P1-201ENST00000425516 SPHKAPQ2M3C7 1700 aa10.38□□□□□ -0.75
CHCHD3P1-201ENST00000425516 TRPM2O94759 1503 aa10.38□□□□□ -0.75
CHCHD3P1-201ENST00000425516 A2ML1A8K2U0 1454 aa10.38□□□□□ -0.75
CHCHD3P1-201ENST00000425516 POTEB2H3BUK9 544 aa10.38□□□□□ -0.75
CHCHD3P1-201ENST00000425516 SGIP1Q9BQI5 828 aa10.38□□□□□ -0.75
CHCHD3P1-201ENST00000425516 UHRF1BP1Q6BDS2 1440 aa10.38□□□□□ -0.75
CHCHD3P1-201ENST00000425516 UGGT1Q9NYU2 1555 aa10.38□□□□□ -0.75
CHCHD3P1-201ENST00000425516 LMTK3Q96Q04 1460 aa10.37□□□□□ -0.75
CHCHD3P1-201ENST00000425516 MYO3AQ8NEV4 1616 aa10.37□□□□□ -0.75
CHCHD3P1-201ENST00000425516 CEP170BQ9Y4F5 1589 aaPredicted RBP10.36□□□□□ -0.75
CHCHD3P1-201ENST00000425516 TIE1P35590 1138 aa10.36□□□□□ -0.75
CHCHD3P1-201ENST00000425516 CLTCL1P53675 1640 aa10.36□□□□□ -0.75
CHCHD3P1-201ENST00000425516 ZNF142P52746 1687 aaPredicted RBP10.35□□□□□ -0.75
CHCHD3P1-201ENST00000425516 TMEM131LA2VDJ0 1609 aa10.34□□□□□ -0.75
CHCHD3P1-201ENST00000425516 POTEFA5A3E0 1075 aa10.34□□□□□ -0.75
CHCHD3P1-201ENST00000425516 THEMISQ8N1K5 641 aaPredicted RBP10.34□□□□□ -0.75
CHCHD3P1-201ENST00000425516 KDM5AP29375 1690 aaKnown RBP10.34□□□□□ -0.75
CHCHD3P1-201ENST00000425516 CCDC144AA2RUR9 1427 aa10.33□□□□□ -0.76
CHCHD3P1-201ENST00000425516 SPATA31E1Q6ZUB1 1445 aa10.33□□□□□ -0.76
CHCHD3P1-201ENST00000425516 UBR1Q8IWV7 1749 aa10.33□□□□□ -0.76
CHCHD3P1-201ENST00000425516 CHRM1P11229 460 aaPredicted RBP10.33□□□□□ -0.76
CHCHD3P1-201ENST00000425516 HSPA2P54652 639 aa10.33□□□□□ -0.76
CHCHD3P1-201ENST00000425516 RNF25Q96BH1 459 aaPredicted RBP10.33□□□□□ -0.76
CHCHD3P1-201ENST00000425516 ADGRB3O60242 1522 aa10.33□□□□□ -0.76
CHCHD3P1-201ENST00000425516 ARHGAP23Q9P227 1491 aa10.32□□□□□ -0.76
CHCHD3P1-201ENST00000425516 LHX8Q68G74 356 aa10.32□□□□□ -0.76
CHCHD3P1-201ENST00000425516 TMEM106CQ9BVX2 250 aa10.32□□□□□ -0.76
CHCHD3P1-201ENST00000425516 METRNQ9UJH8 293 aa10.32□□□□□ -0.76
CHCHD3P1-201ENST00000425516 NEURL4Q96JN8 1562 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms