RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 ZNF516Q92618 1163 aa12.77□□□□□ -0.37
RAB3GAP1-202ENST00000425393 LAPTM4AQ15012 233 aa12.76□□□□□ -0.37
RAB3GAP1-202ENST00000425393 COPS2P61201 443 aa12.74□□□□□ -0.37
RAB3GAP1-202ENST00000425393 PXYLP1Q8TE99 480 aa12.74□□□□□ -0.37
RAB3GAP1-202ENST00000425393 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.73□□□□□ -0.37
RAB3GAP1-202ENST00000425393 PRR14Q9BWN1 585 aa12.73□□□□□ -0.37
RAB3GAP1-202ENST00000425393 GNPATO15228 680 aa12.72□□□□□ -0.37
RAB3GAP1-202ENST00000425393 FECHP22830 423 aa12.72□□□□□ -0.37
RAB3GAP1-202ENST00000425393 OATP04181 439 aa12.71□□□□□ -0.37
RAB3GAP1-202ENST00000425393 METTL3Q86U44 580 aaKnown RBP12.71□□□□□ -0.37
RAB3GAP1-202ENST00000425393 VSIG10Q8N0Z9 540 aa12.71□□□□□ -0.37
RAB3GAP1-202ENST00000425393 NKX2-3Q8TAU0 364 aa12.7□□□□□ -0.38
RAB3GAP1-202ENST00000425393 PPP1R18Q6NYC8 613 aa12.69□□□□□ -0.38
RAB3GAP1-202ENST00000425393 PCDHB3Q9Y5E6 796 aa12.69□□□□□ -0.38
RAB3GAP1-202ENST00000425393 CFHP08603 1231 aa12.67□□□□□ -0.38
RAB3GAP1-202ENST00000425393 SLC10A3P09131 477 aa12.67□□□□□ -0.38
RAB3GAP1-202ENST00000425393 BLOC1S3Q6QNY0 202 aa12.67□□□□□ -0.38
RAB3GAP1-202ENST00000425393 ZPR1O75312 459 aa12.66□□□□□ -0.38
RAB3GAP1-202ENST00000425393 GPIHBP1Q8IV16 184 aa12.66□□□□□ -0.38
RAB3GAP1-202ENST00000425393 ACTN4O43707 911 aaKnown RBP12.65□□□□□ -0.38
RAB3GAP1-202ENST00000425393 KMT5BQ4FZB7 885 aa12.65□□□□□ -0.38
RAB3GAP1-202ENST00000425393 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.64□□□□□ -0.39
RAB3GAP1-202ENST00000425393 GFRA3O60609 400 aa12.63□□□□□ -0.39
RAB3GAP1-202ENST00000425393 GGCXP38435 758 aa12.63□□□□□ -0.39
RAB3GAP1-202ENST00000425393 PRKD2Q9BZL6 878 aa12.63□□□□□ -0.39
RAB3GAP1-202ENST00000425393 V9GY48 417 aaPredicted RBP12.61□□□□□ -0.39
RAB3GAP1-202ENST00000425393 SLC24A1O60721 1099 aa12.6□□□□□ -0.39
RAB3GAP1-202ENST00000425393 TLL1O43897 1013 aa12.59□□□□□ -0.39
RAB3GAP1-202ENST00000425393 NLRP7Q8WX94 980 aa12.58□□□□□ -0.4
RAB3GAP1-202ENST00000425393 PHOX2BQ99453 314 aa12.58□□□□□ -0.4
RAB3GAP1-202ENST00000425393 NRG2O14511 850 aaPredicted RBP12.56□□□□□ -0.4
RAB3GAP1-202ENST00000425393 DAXXQ9UER7 740 aaPredicted RBP12.56□□□□□ -0.4
RAB3GAP1-202ENST00000425393 TMUB1Q9BVT8 246 aa12.55□□□□□ -0.4
RAB3GAP1-202ENST00000425393 RSPH4AQ5TD94 716 aa12.54□□□□□ -0.4
RAB3GAP1-202ENST00000425393 TRAF7Q6Q0C0 670 aa12.54□□□□□ -0.4
RAB3GAP1-202ENST00000425393 TULP1O00294 542 aaPredicted RBP12.53□□□□□ -0.4
RAB3GAP1-202ENST00000425393 NR1I2O75469 434 aa12.52□□□□□ -0.41
RAB3GAP1-202ENST00000425393 RDH13Q8NBN7 331 aa12.52□□□□□ -0.41
RAB3GAP1-202ENST00000425393 DDX11L8A8MPP1 907 aa12.51□□□□□ -0.41
RAB3GAP1-202ENST00000425393 RNF223E7ERA6 249 aa12.51□□□□□ -0.41
RAB3GAP1-202ENST00000425393 MAP2K5Q13163 448 aa12.5□□□□□ -0.41
RAB3GAP1-202ENST00000425393 PUS10Q3MIT2 529 aaKnown RBP12.5□□□□□ -0.41
RAB3GAP1-202ENST00000425393 S1PR4O95977 384 aa12.49□□□□□ -0.41
RAB3GAP1-202ENST00000425393 ADH1BP00325 375 aa12.49□□□□□ -0.41
RAB3GAP1-202ENST00000425393 SULF1Q8IWU6 871 aa12.48□□□□□ -0.41
RAB3GAP1-202ENST00000425393 SCUBE3Q8IX30 993 aa12.47□□□□□ -0.41
RAB3GAP1-202ENST00000425393 FUT2Q10981 343 aa12.46□□□□□ -0.41
RAB3GAP1-202ENST00000425393 PDZRN3Q9UPQ7 1066 aa12.46□□□□□ -0.41
RAB3GAP1-202ENST00000425393 EMID1Q96A84 441 aaPredicted RBP12.45□□□□□ -0.42
RAB3GAP1-202ENST00000425393 GCGRP47871 477 aa12.44□□□□□ -0.42
RAB3GAP1-202ENST00000425393 ANKLE1Q8NAG6 615 aa12.44□□□□□ -0.42
RAB3GAP1-202ENST00000425393 PPEF1O14829 653 aaPredicted RBP12.43□□□□□ -0.42
RAB3GAP1-202ENST00000425393 IRF6O14896 467 aa12.43□□□□□ -0.42
RAB3GAP1-202ENST00000425393 MORN1Q5T089 497 aa12.43□□□□□ -0.42
RAB3GAP1-202ENST00000425393 SLC6A16Q9GZN6 736 aa12.42□□□□□ -0.42
RAB3GAP1-202ENST00000425393 SPSB2Q99619 263 aa12.41□□□□□ -0.42
RAB3GAP1-202ENST00000425393 MINK1Q8N4C8 1332 aaPredicted RBP12.4□□□□□ -0.42
RAB3GAP1-202ENST00000425393 ATP6V1AP38606 617 aa12.4□□□□□ -0.42
RAB3GAP1-202ENST00000425393 SLC19A1P41440 591 aa12.4□□□□□ -0.42
RAB3GAP1-202ENST00000425393 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.39□□□□□ -0.43
RAB3GAP1-202ENST00000425393 CCDC102AQ96A19 550 aa12.39□□□□□ -0.43
RAB3GAP1-202ENST00000425393 LCE2BO14633 110 aa12.38□□□□□ -0.43
RAB3GAP1-202ENST00000425393 THAP11Q96EK4 314 aa12.38□□□□□ -0.43
RAB3GAP1-202ENST00000425393 CD46P15529 392 aa12.37□□□□□ -0.43
RAB3GAP1-202ENST00000425393 SLC27A5Q9Y2P5 690 aa12.37□□□□□ -0.43
RAB3GAP1-202ENST00000425393 MDM2Q00987 491 aaPredicted RBP12.36□□□□□ -0.43
RAB3GAP1-202ENST00000425393 PLA2G2CQ5R387 149 aa12.36□□□□□ -0.43
RAB3GAP1-202ENST00000425393 SPRYD7Q5W111 196 aa12.36□□□□□ -0.43
RAB3GAP1-202ENST00000425393 LMOD2Q6P5Q4 547 aa12.35□□□□□ -0.43
RAB3GAP1-202ENST00000425393 LIAT1Q6ZQX7 453 aa12.35□□□□□ -0.43
RAB3GAP1-202ENST00000425393 TRIM67Q6ZTA4 783 aa12.35□□□□□ -0.43
RAB3GAP1-202ENST00000425393 FMNL1O95466 1100 aaPredicted RBP12.33□□□□□ -0.44
RAB3GAP1-202ENST00000425393 ZNF598Q86UK7 904 aaKnown RBP12.32□□□□□ -0.44
RAB3GAP1-202ENST00000425393 SALL2Q9Y467 1007 aaPredicted RBP12.32□□□□□ -0.44
RAB3GAP1-202ENST00000425393 GRIPAP1Q4V328 841 aa12.31□□□□□ -0.44
RAB3GAP1-202ENST00000425393 RNF19BQ6ZMZ0 732 aa12.31□□□□□ -0.44
RAB3GAP1-202ENST00000425393 FAM160A2Q8N612 972 aaPredicted RBP12.31□□□□□ -0.44
RAB3GAP1-202ENST00000425393 ZNF787Q6DD87 383 aa12.3□□□□□ -0.44
RAB3GAP1-202ENST00000425393 BRICD5Q6PL45 260 aa12.3□□□□□ -0.44
RAB3GAP1-202ENST00000425393 PRDM9Q9NQV7 894 aa12.3□□□□□ -0.44
RAB3GAP1-202ENST00000425393 ZNF697Q5TEC3 545 aa12.29□□□□□ -0.44
RAB3GAP1-202ENST00000425393 GPCPD1Q9NPB8 672 aa12.29□□□□□ -0.44
RAB3GAP1-202ENST00000425393 KDM4AO75164 1064 aa12.28□□□□□ -0.44
RAB3GAP1-202ENST00000425393 PKDCCQ504Y2 493 aa12.28□□□□□ -0.44
RAB3GAP1-202ENST00000425393 FCF1Q9Y324 198 aaKnown RBP12.28□□□□□ -0.44
RAB3GAP1-202ENST00000425393 CLCN1P35523 988 aa12.27□□□□□ -0.45
RAB3GAP1-202ENST00000425393 PRR20EP86478 221 aa12.26□□□□□ -0.45
RAB3GAP1-202ENST00000425393 PRR20CP86479 221 aa12.26□□□□□ -0.45
RAB3GAP1-202ENST00000425393 PRR20DP86480 221 aa12.26□□□□□ -0.45
RAB3GAP1-202ENST00000425393 PRR20BP86481 221 aa12.26□□□□□ -0.45
RAB3GAP1-202ENST00000425393 PRR20AP86496 221 aa12.26□□□□□ -0.45
RAB3GAP1-202ENST00000425393 MSS51Q4VC12 460 aa12.26□□□□□ -0.45
RAB3GAP1-202ENST00000425393 FAM217BQ9NTX9 383 aaPredicted RBP12.26□□□□□ -0.45
RAB3GAP1-202ENST00000425393 DGAT1O75907 488 aa12.24□□□□□ -0.45
RAB3GAP1-202ENST00000425393 HLA-CQ95604 372 aa12.24□□□□□ -0.45
RAB3GAP1-202ENST00000425393 GDF9O60383 454 aa12.23□□□□□ -0.45
RAB3GAP1-202ENST00000425393 ZMYND10O75800 440 aa12.23□□□□□ -0.45
RAB3GAP1-202ENST00000425393 USP46P62068 366 aa12.23□□□□□ -0.45
RAB3GAP1-202ENST00000425393 Q3C1V9 767 aa12.23□□□□□ -0.45
RAB3GAP1-202ENST00000425393 TNFRSF10AO00220 468 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms