RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 KMT5BQ4FZB7 885 aa6.15□□□□□ -1.42
PMS1-209ENST00000424059 RCCD1A6NED2 376 aa6.14□□□□□ -1.43
PMS1-209ENST00000424059 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.14□□□□□ -1.43
PMS1-209ENST00000424059 V9GY48 417 aaPredicted RBP6.14□□□□□ -1.43
PMS1-209ENST00000424059 TMUB1Q9BVT8 246 aa6.13□□□□□ -1.43
PMS1-209ENST00000424059 RSPH4AQ5TD94 716 aa6.13□□□□□ -1.43
PMS1-209ENST00000424059 PCDHB3Q9Y5E6 796 aa6.13□□□□□ -1.43
PMS1-209ENST00000424059 ACTN4O43707 911 aaKnown RBP6.12□□□□□ -1.43
PMS1-209ENST00000424059 ZPR1O75312 459 aa6.11□□□□□ -1.43
PMS1-209ENST00000424059 PPP1R18Q6NYC8 613 aa6.11□□□□□ -1.43
PMS1-209ENST00000424059 PXYLP1Q8TE99 480 aa6.11□□□□□ -1.43
PMS1-209ENST00000424059 ZNF516Q92618 1163 aa6.11□□□□□ -1.43
PMS1-209ENST00000424059 GNPATO15228 680 aa6.11□□□□□ -1.43
PMS1-209ENST00000424059 HAP1P54257 671 aaPredicted RBP6.09□□□□□ -1.43
PMS1-209ENST00000424059 COPS2P61201 443 aa6.09□□□□□ -1.43
PMS1-209ENST00000424059 PRKD2Q9BZL6 878 aa6.09□□□□□ -1.43
PMS1-209ENST00000424059 CFHP08603 1231 aa6.09□□□□□ -1.43
PMS1-209ENST00000424059 NR1I2O75469 434 aa6.08□□□□□ -1.44
PMS1-209ENST00000424059 METTL3Q86U44 580 aaKnown RBP6.08□□□□□ -1.44
PMS1-209ENST00000424059 NRG2O14511 850 aaPredicted RBP6.08□□□□□ -1.44
PMS1-209ENST00000424059 GPR37O15354 613 aa6.08□□□□□ -1.44
PMS1-209ENST00000424059 BLOC1S3Q6QNY0 202 aa6.08□□□□□ -1.44
PMS1-209ENST00000424059 RBM26Q5T8P6 1007 aaKnown RBP6.07□□□□□ -1.44
PMS1-209ENST00000424059 TULP1O00294 542 aaPredicted RBP6.06□□□□□ -1.44
PMS1-209ENST00000424059 VSIG10Q8N0Z9 540 aa6.06□□□□□ -1.44
PMS1-209ENST00000424059 NKX2-3Q8TAU0 364 aa6.06□□□□□ -1.44
PMS1-209ENST00000424059 DAXXQ9UER7 740 aaPredicted RBP6.06□□□□□ -1.44
PMS1-209ENST00000424059 ADH1BP00325 375 aa6.06□□□□□ -1.44
PMS1-209ENST00000424059 SLC10A3P09131 477 aa6.06□□□□□ -1.44
PMS1-209ENST00000424059 Q6ZNB5 142 aa6.06□□□□□ -1.44
PMS1-209ENST00000424059 FAM161AQ3B820 660 aa6.05□□□□□ -1.44
PMS1-209ENST00000424059 GPIHBP1Q8IV16 184 aa6.05□□□□□ -1.44
PMS1-209ENST00000424059 GFRA3O60609 400 aa6.04□□□□□ -1.44
PMS1-209ENST00000424059 SULF1Q8IWU6 871 aa6.04□□□□□ -1.44
PMS1-209ENST00000424059 ANKLE1Q8NAG6 615 aa6.04□□□□□ -1.44
PMS1-209ENST00000424059 RNF223E7ERA6 249 aa6.02□□□□□ -1.45
PMS1-209ENST00000424059 SUZ12Q15022 739 aaKnown RBP6.02□□□□□ -1.45
PMS1-209ENST00000424059 KDM2AQ9Y2K7 1162 aa6.02□□□□□ -1.45
PMS1-209ENST00000424059 TLL1O43897 1013 aa6.01□□□□□ -1.45
PMS1-209ENST00000424059 SLC19A1P41440 591 aa6.01□□□□□ -1.45
PMS1-209ENST00000424059 SLC6A16Q9GZN6 736 aa6.01□□□□□ -1.45
PMS1-209ENST00000424059 FECHP22830 423 aa6□□□□□ -1.45
PMS1-209ENST00000424059 MAP2K5Q13163 448 aa6□□□□□ -1.45
PMS1-209ENST00000424059 RDH13Q8NBN7 331 aa6□□□□□ -1.45
PMS1-209ENST00000424059 S1PR4O95977 384 aa5.99□□□□□ -1.45
PMS1-209ENST00000424059 TRAF7Q6Q0C0 670 aa5.99□□□□□ -1.45
PMS1-209ENST00000424059 KRTAP4-8Q9BYQ9 185 aa5.99□□□□□ -1.45
PMS1-209ENST00000424059 PDZRN3Q9UPQ7 1066 aa5.99□□□□□ -1.45
PMS1-209ENST00000424059 SALL2Q9Y467 1007 aaPredicted RBP5.99□□□□□ -1.45
PMS1-209ENST00000424059 GCGRP47871 477 aa5.99□□□□□ -1.45
PMS1-209ENST00000424059 GRIPAP1Q4V328 841 aa5.99□□□□□ -1.45
PMS1-209ENST00000424059 MORN1Q5T089 497 aa5.99□□□□□ -1.45
PMS1-209ENST00000424059 SCUBE3Q8IX30 993 aa5.99□□□□□ -1.45
PMS1-209ENST00000424059 DDX11L8A8MPP1 907 aa5.98□□□□□ -1.45
PMS1-209ENST00000424059 ATP6V1AP38606 617 aa5.98□□□□□ -1.45
PMS1-209ENST00000424059 PRR20EP86478 221 aa5.98□□□□□ -1.45
PMS1-209ENST00000424059 PRR20CP86479 221 aa5.98□□□□□ -1.45
PMS1-209ENST00000424059 PRR20DP86480 221 aa5.98□□□□□ -1.45
PMS1-209ENST00000424059 PRR20BP86481 221 aa5.98□□□□□ -1.45
PMS1-209ENST00000424059 PRR20AP86496 221 aa5.98□□□□□ -1.45
PMS1-209ENST00000424059 LMOD2Q6P5Q4 547 aa5.98□□□□□ -1.45
PMS1-209ENST00000424059 ZNF598Q86UK7 904 aaKnown RBP5.98□□□□□ -1.45
PMS1-209ENST00000424059 KRTAP1-3Q8IUG1 177 aa5.98□□□□□ -1.45
PMS1-209ENST00000424059 SPRYD7Q5W111 196 aa5.98□□□□□ -1.45
PMS1-209ENST00000424059 SPSB2Q99619 263 aa5.98□□□□□ -1.45
PMS1-209ENST00000424059 FMNL1O95466 1100 aaPredicted RBP5.97□□□□□ -1.45
PMS1-209ENST00000424059 MINK1Q8N4C8 1332 aaPredicted RBP5.97□□□□□ -1.45
PMS1-209ENST00000424059 RPIAP49247 311 aa5.96□□□□□ -1.46
PMS1-209ENST00000424059 EMID1Q96A84 441 aaPredicted RBP5.96□□□□□ -1.46
PMS1-209ENST00000424059 THAP11Q96EK4 314 aa5.96□□□□□ -1.46
PMS1-209ENST00000424059 DGAT1O75907 488 aa5.95□□□□□ -1.46
PMS1-209ENST00000424059 USP46P62068 366 aa5.95□□□□□ -1.46
PMS1-209ENST00000424059 FUT2Q10981 343 aa5.95□□□□□ -1.46
PMS1-209ENST00000424059 Q3C1V9 767 aa5.95□□□□□ -1.46
PMS1-209ENST00000424059 PUS10Q3MIT2 529 aaKnown RBP5.95□□□□□ -1.46
PMS1-209ENST00000424059 MSS51Q4VC12 460 aa5.95□□□□□ -1.46
PMS1-209ENST00000424059 ZNF697Q5TEC3 545 aa5.94□□□□□ -1.46
PMS1-209ENST00000424059 LIAT1Q6ZQX7 453 aa5.94□□□□□ -1.46
PMS1-209ENST00000424059 PHOX2BQ99453 314 aa5.94□□□□□ -1.46
PMS1-209ENST00000424059 IRF6O14896 467 aa5.94□□□□□ -1.46
PMS1-209ENST00000424059 CD46P15529 392 aa5.94□□□□□ -1.46
PMS1-209ENST00000424059 LCE2BO14633 110 aa5.93□□□□□ -1.46
PMS1-209ENST00000424059 PPEF1O14829 653 aaPredicted RBP5.93□□□□□ -1.46
PMS1-209ENST00000424059 BRICD5Q6PL45 260 aa5.93□□□□□ -1.46
PMS1-209ENST00000424059 TRIM67Q6ZTA4 783 aa5.93□□□□□ -1.46
PMS1-209ENST00000424059 SLC27A5Q9Y2P5 690 aa5.92□□□□□ -1.46
PMS1-209ENST00000424059 GDF9O60383 454 aa5.91□□□□□ -1.46
PMS1-209ENST00000424059 CLCN1P35523 988 aa5.91□□□□□ -1.46
PMS1-209ENST00000424059 NLRP7Q8WX94 980 aa5.91□□□□□ -1.46
PMS1-209ENST00000424059 PKDCCQ504Y2 493 aa5.91□□□□□ -1.46
PMS1-209ENST00000424059 KDM4AO75164 1064 aa5.9□□□□□ -1.47
PMS1-209ENST00000424059 PLA2G2CQ5R387 149 aa5.9□□□□□ -1.47
PMS1-209ENST00000424059 XP32Q5T750 250 aa5.9□□□□□ -1.47
PMS1-209ENST00000424059 FAM160A2Q8N612 972 aaPredicted RBP5.9□□□□□ -1.47
PMS1-209ENST00000424059 CCDC102AQ96A19 550 aa5.9□□□□□ -1.47
PMS1-209ENST00000424059 CD2BP2O95400 341 aaKnown RBP5.89□□□□□ -1.47
PMS1-209ENST00000424059 GPCPD1Q9NPB8 672 aa5.89□□□□□ -1.47
PMS1-209ENST00000424059 FCF1Q9Y324 198 aaKnown RBP5.89□□□□□ -1.47
PMS1-209ENST00000424059 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.89□□□□□ -1.47
PMS1-209ENST00000424059 MMP16P51512 607 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms