RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 UHRF1BP1Q6BDS2 1440 aa16.9■□□□□ 0.3
CALD1-205ENST00000422748 ABCC10Q5T3U5 1492 aa16.9■□□□□ 0.3
CALD1-205ENST00000422748 TBC1D2Q9BYX2 928 aa16.9■□□□□ 0.3
CALD1-205ENST00000422748 CALD1Q05682 793 aaKnown RBP16.89■□□□□ 0.29
CALD1-205ENST00000422748 FBXO3Q9UK99 471 aa16.89■□□□□ 0.29
CALD1-205ENST00000422748 IGHDP01880 384 aa16.89■□□□□ 0.29
CALD1-205ENST00000422748 CC2D1BQ5T0F9 858 aaKnown RBP16.89■□□□□ 0.29
CALD1-205ENST00000422748 SPRYD3Q8NCJ5 442 aa16.89■□□□□ 0.29
CALD1-205ENST00000422748 GRPEL1Q9HAV7 217 aa16.89■□□□□ 0.29
CALD1-205ENST00000422748 PRDM4Q9UKN5 801 aa16.89■□□□□ 0.29
CALD1-205ENST00000422748 ZNF644Q9H582 1327 aaPredicted RBP16.88■□□□□ 0.29
CALD1-205ENST00000422748 TRAK2O60296 914 aa16.88■□□□□ 0.29
CALD1-205ENST00000422748 ABCC5O15440 1437 aa16.88■□□□□ 0.29
CALD1-205ENST00000422748 KIAA1107Q9UPP5 1409 aa16.88■□□□□ 0.29
CALD1-205ENST00000422748 ITSN2Q9NZM3 1697 aa16.88■□□□□ 0.29
CALD1-205ENST00000422748 PLEKHD1A6NEE1 506 aa16.88■□□□□ 0.29
CALD1-205ENST00000422748 PER1O15534 1290 aaPredicted RBP16.88■□□□□ 0.29
CALD1-205ENST00000422748 DNMT1P26358 1616 aaKnown RBP16.87■□□□□ 0.29
CALD1-205ENST00000422748 PLEKHH1Q9ULM0 1364 aa16.87■□□□□ 0.29
CALD1-205ENST00000422748 ABCC2Q92887 1545 aa16.86■□□□□ 0.29
CALD1-205ENST00000422748 RBM10P98175 930 aaKnown RBP16.86■□□□□ 0.29
CALD1-205ENST00000422748 EIF3AQ14152 1382 aaKnown RBP16.86■□□□□ 0.29
CALD1-205ENST00000422748 BRD2P25440 801 aaKnown RBP16.85■□□□□ 0.29
CALD1-205ENST00000422748 CDC42BPAQ5VT25 1732 aa16.85■□□□□ 0.29
CALD1-205ENST00000422748 A0A0U1RQG5 324 aaPredicted RBP16.84■□□□□ 0.29
CALD1-205ENST00000422748 TRIM44Q96DX7 344 aaPredicted RBP16.84■□□□□ 0.29
CALD1-205ENST00000422748 ADAMTS8Q9UP79 889 aa16.84■□□□□ 0.29
CALD1-205ENST00000422748 PKD2Q13563 968 aa16.84■□□□□ 0.29
CALD1-205ENST00000422748 CAMSAP2Q08AD1 1489 aa16.84■□□□□ 0.29
CALD1-205ENST00000422748 KDM2AQ9Y2K7 1162 aa16.83■□□□□ 0.29
CALD1-205ENST00000422748 KIAA1211Q6ZU35 1233 aa16.83■□□□□ 0.28
CALD1-205ENST00000422748 TBC1D32Q96NH3 1257 aa16.83■□□□□ 0.28
CALD1-205ENST00000422748 MAPK8IP3Q9UPT6 1336 aa16.83■□□□□ 0.28
CALD1-205ENST00000422748 CFDP1Q9UEE9 299 aaPredicted RBP16.82■□□□□ 0.28
CALD1-205ENST00000422748 GOLGA2Q08379 1002 aa16.82■□□□□ 0.28
CALD1-205ENST00000422748 UHRF1BP1LA0JNW5 1464 aa16.81■□□□□ 0.28
CALD1-205ENST00000422748 UPF2Q9HAU5 1272 aaKnown RBP16.81■□□□□ 0.28
CALD1-205ENST00000422748 ZNF521Q96K83 1311 aa16.8■□□□□ 0.28
CALD1-205ENST00000422748 CHMP5Q9NZZ3 219 aa16.79■□□□□ 0.28
CALD1-205ENST00000422748 BCAR3O75815 825 aa16.79■□□□□ 0.28
CALD1-205ENST00000422748 SLFN5Q08AF3 891 aa16.77■□□□□ 0.28
CALD1-205ENST00000422748 AAMPQ13685 434 aa16.77■□□□□ 0.28
CALD1-205ENST00000422748 ISY1Q9ULR0 285 aaKnown RBP16.77■□□□□ 0.28
CALD1-205ENST00000422748 ARHGEF12Q9NZN5 1544 aa16.77■□□□□ 0.27
CALD1-205ENST00000422748 GAS2L3Q86XJ1 694 aa16.76■□□□□ 0.27
CALD1-205ENST00000422748 CROCC2H7BZ55 1655 aa16.76■□□□□ 0.27
CALD1-205ENST00000422748 RIPK4P57078 832 aa16.75■□□□□ 0.27
CALD1-205ENST00000422748 ZCCHC11Q5TAX3 1644 aaKnown RBP16.75■□□□□ 0.27
CALD1-205ENST00000422748 DDX11L8A8MPP1 907 aa16.74■□□□□ 0.27
CALD1-205ENST00000422748 PANK3Q9H999 370 aa16.74■□□□□ 0.27
CALD1-205ENST00000422748 CDC42BPBQ9Y5S2 1711 aa16.74■□□□□ 0.27
CALD1-205ENST00000422748 ADGRL2O95490 1459 aa16.74■□□□□ 0.27
CALD1-205ENST00000422748 PREX2Q70Z35 1606 aa16.74■□□□□ 0.27
CALD1-205ENST00000422748 WDR43Q15061 677 aaKnown RBP eCLIP16.73■□□□□ 0.27
CALD1-205ENST00000422748 CLUAP1Q96AJ1 413 aa16.73■□□□□ 0.27
CALD1-205ENST00000422748 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.73■□□□□ 0.27
CALD1-205ENST00000422748 TTC37Q6PGP7 1564 aa16.73■□□□□ 0.27
CALD1-205ENST00000422748 SPINK5Q9NQ38 1064 aaPredicted RBP16.73■□□□□ 0.27
CALD1-205ENST00000422748 ZNF777Q9ULD5 760 aaPredicted RBP16.73■□□□□ 0.27
CALD1-205ENST00000422748 ADGBQ8N7X0 1667 aa16.72■□□□□ 0.27
CALD1-205ENST00000422748 CGNL1Q0VF96 1302 aa16.72■□□□□ 0.27
CALD1-205ENST00000422748 TMEM132AQ24JP5 1023 aa16.72■□□□□ 0.27
CALD1-205ENST00000422748 TRMT2AQ8IZ69 625 aaKnown RBP16.72■□□□□ 0.27
CALD1-205ENST00000422748 OFD1O75665 1012 aa16.71■□□□□ 0.27
CALD1-205ENST00000422748 NKTRP30414 1462 aaKnown RBP16.71■□□□□ 0.27
CALD1-205ENST00000422748 FAM13BQ9NYF5 915 aa16.7■□□□□ 0.26
CALD1-205ENST00000422748 COG6Q9Y2V7 657 aa16.7■□□□□ 0.26
CALD1-205ENST00000422748 DISP3Q9P2K9 1392 aa16.7■□□□□ 0.26
CALD1-205ENST00000422748 SAMD9LQ8IVG5 1584 aa16.7■□□□□ 0.26
CALD1-205ENST00000422748 COL17A1Q9UMD9 1497 aaPredicted RBP16.69■□□□□ 0.26
CALD1-205ENST00000422748 PANK1Q8TE04 598 aa16.69■□□□□ 0.26
CALD1-205ENST00000422748 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
CALD1-205ENST00000422748 ZNF692Q9BU19 519 aaPredicted RBP16.69■□□□□ 0.26
CALD1-205ENST00000422748 SHANK2Q9UPX8 1470 aa16.69■□□□□ 0.26
CALD1-205ENST00000422748 OSCARQ8IYS5 282 aa16.69■□□□□ 0.26
CALD1-205ENST00000422748 ARHGEF5Q12774 1597 aa16.68■□□□□ 0.26
CALD1-205ENST00000422748 ZSCAN30Q86W11 494 aa16.68■□□□□ 0.26
CALD1-205ENST00000422748 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.67■□□□□ 0.26
CALD1-205ENST00000422748 PDE3AQ14432 1141 aa16.67■□□□□ 0.26
CALD1-205ENST00000422748 MAP7D2Q96T17 732 aa16.67■□□□□ 0.26
CALD1-205ENST00000422748 RTEL1-TNFRSF6BF6WH68 1400 aa16.67■□□□□ 0.26
CALD1-205ENST00000422748 CCDC173Q0VFZ6 552 aa16.66■□□□□ 0.26
CALD1-205ENST00000422748 CCDC146Q8IYE0 955 aa16.66■□□□□ 0.26
CALD1-205ENST00000422748 PDZRN3Q9UPQ7 1066 aa16.66■□□□□ 0.26
CALD1-205ENST00000422748 PPP2R1AP30153 589 aa16.66■□□□□ 0.26
CALD1-205ENST00000422748 TERF1P54274 439 aa16.65■□□□□ 0.26
CALD1-205ENST00000422748 C22orf23Q9BZE7 217 aa16.65■□□□□ 0.26
CALD1-205ENST00000422748 TRPM1Q7Z4N2 1603 aa16.65■□□□□ 0.26
CALD1-205ENST00000422748 NBPF1Q3BBV0 1214 aa16.65■□□□□ 0.26
CALD1-205ENST00000422748 PPP1R9BQ96SB3 815 aa16.65■□□□□ 0.26
CALD1-205ENST00000422748 CANXP27824 592 aaKnown RBP16.64■□□□□ 0.26
CALD1-205ENST00000422748 R3HCC1Q9Y3T6 440 aaKnown RBP16.64■□□□□ 0.26
CALD1-205ENST00000422748 C9orf84Q5VXU9 1444 aa16.64■□□□□ 0.25
CALD1-205ENST00000422748 ZMYM3Q14202 1370 aa16.64■□□□□ 0.25
CALD1-205ENST00000422748 MSNP26038 577 aaKnown RBP16.64■□□□□ 0.25
CALD1-205ENST00000422748 SMAP1Q8IYB5 467 aaPredicted RBP16.64■□□□□ 0.25
CALD1-205ENST00000422748 MYO5CQ9NQX4 1742 aa16.64■□□□□ 0.25
CALD1-205ENST00000422748 CDK11BP21127 795 aaKnown RBP16.63■□□□□ 0.25
CALD1-205ENST00000422748 MFAP1P55081 439 aaKnown RBP16.63■□□□□ 0.25
CALD1-205ENST00000422748 TNPO1Q92973 898 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms