RNA–Protein interactions for RNA: ENST00000420794.2

BDNF-209, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,176 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-209ENST00000420794 LMTK2Q8IWU2 1503 aa10.01□□□□□ -0.81
BDNF-209ENST00000420794 KIF7Q2M1P5 1343 aa10.01□□□□□ -0.81
BDNF-209ENST00000420794 PLA2R1Q13018 1463 aa10.01□□□□□ -0.81
BDNF-209ENST00000420794 UHRF1BP1Q6BDS2 1440 aa10.01□□□□□ -0.81
BDNF-209ENST00000420794 HDGFL2Q7Z4V5 671 aaPredicted RBP10.01□□□□□ -0.81
BDNF-209ENST00000420794 RALGAPBQ86X10 1494 aa10.01□□□□□ -0.81
BDNF-209ENST00000420794 ARHGEF40Q8TER5 1519 aa10.01□□□□□ -0.81
BDNF-209ENST00000420794 MINK1Q8N4C8 1332 aaPredicted RBP10□□□□□ -0.81
BDNF-209ENST00000420794 WASHC2AQ641Q2 1341 aa9.99□□□□□ -0.81
BDNF-209ENST00000420794 RICTORQ6R327 1708 aa9.99□□□□□ -0.81
BDNF-209ENST00000420794 RIMS2Q9UQ26 1411 aa9.99□□□□□ -0.81
BDNF-209ENST00000420794 TERF2IPQ9NYB0 399 aa9.99□□□□□ -0.81
BDNF-209ENST00000420794 CFAP65Q6ZU64 1925 aaKnown RBP9.99□□□□□ -0.81
BDNF-209ENST00000420794 SLC26A8Q96RN1 970 aa9.98□□□□□ -0.81
BDNF-209ENST00000420794 SPATA31E1Q6ZUB1 1445 aa9.98□□□□□ -0.81
BDNF-209ENST00000420794 ERVK-7P63135 1459 aa9.98□□□□□ -0.81
BDNF-209ENST00000420794 SCAF11Q99590 1463 aaKnown RBP9.98□□□□□ -0.81
BDNF-209ENST00000420794 CC2D1BQ5T0F9 858 aaKnown RBP9.98□□□□□ -0.81
BDNF-209ENST00000420794 FAM9BQ8IZU0 186 aa9.98□□□□□ -0.81
BDNF-209ENST00000420794 PRAM1Q96QH2 718 aa9.98□□□□□ -0.81
BDNF-209ENST00000420794 KTN1Q86UP2 1357 aaKnown RBP9.98□□□□□ -0.81
BDNF-209ENST00000420794 NEFMP07197 916 aa9.97□□□□□ -0.81
BDNF-209ENST00000420794 CCER2I3L3R5 266 aa9.97□□□□□ -0.81
BDNF-209ENST00000420794 PANK3Q9H999 370 aa9.97□□□□□ -0.81
BDNF-209ENST00000420794 RALBP1Q15311 655 aa9.97□□□□□ -0.81
BDNF-209ENST00000420794 RNF17Q9BXT8 1623 aaKnown RBP9.97□□□□□ -0.81
BDNF-209ENST00000420794 FRMPD1Q5SYB0 1578 aa9.96□□□□□ -0.81
BDNF-209ENST00000420794 NEFLP07196 543 aa9.96□□□□□ -0.82
BDNF-209ENST00000420794 WDR43Q15061 677 aaKnown RBP eCLIP9.96□□□□□ -0.82
BDNF-209ENST00000420794 KIF13AQ9H1H9 1805 aa9.95□□□□□ -0.82
BDNF-209ENST00000420794 CFAP53Q96M91 514 aa9.95□□□□□ -0.82
BDNF-209ENST00000420794 E9PCH4 1651 aa9.95□□□□□ -0.82
BDNF-209ENST00000420794 UGGT1Q9NYU2 1555 aa9.95□□□□□ -0.82
BDNF-209ENST00000420794 MORC1Q86VD1 984 aa9.94□□□□□ -0.82
BDNF-209ENST00000420794 CEP152O94986 1710 aa9.94□□□□□ -0.82
BDNF-209ENST00000420794 DEPDC5O75140 1603 aa9.94□□□□□ -0.82
BDNF-209ENST00000420794 SPHKAPQ2M3C7 1700 aa9.94□□□□□ -0.82
BDNF-209ENST00000420794 REREQ9P2R6 1566 aa9.94□□□□□ -0.82
BDNF-209ENST00000420794 VWDEQ8N2E2 1590 aa9.94□□□□□ -0.82
BDNF-209ENST00000420794 ZC3H13Q5T200 1668 aaKnown RBP9.94□□□□□ -0.82
BDNF-209ENST00000420794 HNRNPUQ00839 825 aaKnown RBP eCLIP9.93□□□□□ -0.82
BDNF-209ENST00000420794 TMEM2Q9UHN6 1383 aa9.93□□□□□ -0.82
BDNF-209ENST00000420794 NLRP1Q9C000 1473 aa9.93□□□□□ -0.82
BDNF-209ENST00000420794 PPRC1Q5VV67 1664 aaKnown RBP9.93□□□□□ -0.82
BDNF-209ENST00000420794 CAMSAP1Q5T5Y3 1602 aa9.93□□□□□ -0.82
BDNF-209ENST00000420794 KIF1BO60333 1816 aa9.93□□□□□ -0.82
BDNF-209ENST00000420794 GPRASP1Q5JY77 1395 aa9.92□□□□□ -0.82
BDNF-209ENST00000420794 CABP2Q9NPB3 220 aa9.92□□□□□ -0.82
BDNF-209ENST00000420794 NGDNQ8NEJ9 315 aaKnown RBP9.92□□□□□ -0.82
BDNF-209ENST00000420794 MYOM2P54296 1465 aa9.92□□□□□ -0.82
BDNF-209ENST00000420794 CLTCL1P53675 1640 aa9.92□□□□□ -0.82
BDNF-209ENST00000420794 NUTM2FA1L443 756 aa9.92□□□□□ -0.82
BDNF-209ENST00000420794 PRKRIP1Q9H875 184 aaPredicted RBP9.92□□□□□ -0.82
BDNF-209ENST00000420794 AMOTL2Q9Y2J4 779 aa9.91□□□□□ -0.82
BDNF-209ENST00000420794 CGNL1Q0VF96 1302 aa9.91□□□□□ -0.82
BDNF-209ENST00000420794 C11orf95C9JLR9 678 aaPredicted RBP9.91□□□□□ -0.82
BDNF-209ENST00000420794 TNNT2P45379 298 aaPredicted RBP9.91□□□□□ -0.82
BDNF-209ENST00000420794 CDK19Q9BWU1 502 aa9.9□□□□□ -0.82
BDNF-209ENST00000420794 TBX22Q9Y458 520 aa9.9□□□□□ -0.82
BDNF-209ENST00000420794 PROSER2Q86WR7 435 aaPredicted RBP9.9□□□□□ -0.82
BDNF-209ENST00000420794 ATAD2Q6PL18 1390 aa9.9□□□□□ -0.82
BDNF-209ENST00000420794 CLTCQ00610 1675 aaKnown RBP9.9□□□□□ -0.82
BDNF-209ENST00000420794 WAPLQ7Z5K2 1190 aa9.9□□□□□ -0.82
BDNF-209ENST00000420794 PRKCSHP14314 528 aaPredicted RBP9.89□□□□□ -0.83
BDNF-209ENST00000420794 NLRP13Q86W25 1043 aa9.89□□□□□ -0.83
BDNF-209ENST00000420794 NUDCQ9Y266 331 aa9.89□□□□□ -0.83
BDNF-209ENST00000420794 MROH1Q8NDA8 1641 aa9.89□□□□□ -0.83
BDNF-209ENST00000420794 PPM1GO15355 546 aaPredicted RBP9.89□□□□□ -0.83
BDNF-209ENST00000420794 LMOD2Q6P5Q4 547 aa9.89□□□□□ -0.83
BDNF-209ENST00000420794 ZFYVE9O95405 1425 aa9.88□□□□□ -0.83
BDNF-209ENST00000420794 MYBBP1AQ9BQG0 1328 aaKnown RBP9.88□□□□□ -0.83
BDNF-209ENST00000420794 AEBP2Q6ZN18 517 aaPredicted RBP9.88□□□□□ -0.83
BDNF-209ENST00000420794 TESK2Q96S53 571 aa9.88□□□□□ -0.83
BDNF-209ENST00000420794 SLC12A5Q9H2X9 1139 aa9.88□□□□□ -0.83
BDNF-209ENST00000420794 SCAF1Q9H7N4 1312 aaKnown RBP9.87□□□□□ -0.83
BDNF-209ENST00000420794 YTHDC2Q9H6S0 1430 aaKnown RBP9.87□□□□□ -0.83
BDNF-209ENST00000420794 A2ML1A8K2U0 1454 aa9.87□□□□□ -0.83
BDNF-209ENST00000420794 LTKP29376 864 aa9.87□□□□□ -0.83
BDNF-209ENST00000420794 ADGRB3O60242 1522 aa9.87□□□□□ -0.83
BDNF-209ENST00000420794 PAK3O75914 559 aaPredicted RBP9.87□□□□□ -0.83
BDNF-209ENST00000420794 ATF3P18847 181 aa9.87□□□□□ -0.83
BDNF-209ENST00000420794 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.87□□□□□ -0.83
BDNF-209ENST00000420794 LRPPRCP42704 1394 aaKnown RBP9.87□□□□□ -0.83
BDNF-209ENST00000420794 PIK3C2GO75747 1445 aa9.86□□□□□ -0.83
BDNF-209ENST00000420794 PUS7Q96PZ0 661 aaKnown RBP9.86□□□□□ -0.83
BDNF-209ENST00000420794 DMRT2Q9Y5R5 561 aa9.86□□□□□ -0.83
BDNF-209ENST00000420794 CCDC61Q9Y6R9 512 aa9.86□□□□□ -0.83
BDNF-209ENST00000420794 DISP3Q9P2K9 1392 aa9.86□□□□□ -0.83
BDNF-209ENST00000420794 WASLO00401 505 aaPredicted RBP9.85□□□□□ -0.83
BDNF-209ENST00000420794 ZNF692Q9BU19 519 aaPredicted RBP9.85□□□□□ -0.83
BDNF-209ENST00000420794 CABP1Q9NZU7 370 aa9.85□□□□□ -0.83
BDNF-209ENST00000420794 PLEKHG1Q9ULL1 1385 aa9.85□□□□□ -0.83
BDNF-209ENST00000420794 HAP1P54257 671 aaPredicted RBP9.85□□□□□ -0.83
BDNF-209ENST00000420794 NUDT16Q96DE0 195 aaKnown RBP9.84□□□□□ -0.83
BDNF-209ENST00000420794 PLEKHG5O94827 1062 aa9.84□□□□□ -0.83
BDNF-209ENST00000420794 COG3Q96JB2 828 aa9.84□□□□□ -0.83
BDNF-209ENST00000420794 BCORL1Q5H9F3 1711 aa9.84□□□□□ -0.83
BDNF-209ENST00000420794 SALL2Q9Y467 1007 aaPredicted RBP9.84□□□□□ -0.83
BDNF-209ENST00000420794 ABCC11Q96J66 1382 aa9.83□□□□□ -0.84
BDNF-209ENST00000420794 SPATA31D1Q6ZQQ2 1576 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms