RNA–Protein interactions for RNA: ENST00000420047.1

SEMA3A-202, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-202ENST00000420047 TMEM134Q9H6X4 195 aa9.33□□□□□ -0.92
SEMA3A-202ENST00000420047 BLOC1S3Q6QNY0 202 aa9.32□□□□□ -0.92
SEMA3A-202ENST00000420047 SLC19A1P41440 591 aa9.31□□□□□ -0.92
SEMA3A-202ENST00000420047 ADGRG1Q9Y653 693 aa9.31□□□□□ -0.92
SEMA3A-202ENST00000420047 RNF223E7ERA6 249 aa9.3□□□□□ -0.92
SEMA3A-202ENST00000420047 ACTN4O43707 911 aaKnown RBP9.3□□□□□ -0.92
SEMA3A-202ENST00000420047 KMT5BQ4FZB7 885 aa9.3□□□□□ -0.92
SEMA3A-202ENST00000420047 ZNF787Q6DD87 383 aa9.29□□□□□ -0.92
SEMA3A-202ENST00000420047 KCNV2Q8TDN2 545 aa9.29□□□□□ -0.92
SEMA3A-202ENST00000420047 ANKLE1Q8NAG6 615 aa9.28□□□□□ -0.92
SEMA3A-202ENST00000420047 RCCD1A6NED2 376 aa9.27□□□□□ -0.93
SEMA3A-202ENST00000420047 TSHZ2Q9NRE2 1034 aa9.27□□□□□ -0.93
SEMA3A-202ENST00000420047 NUTM2FA1L443 756 aa9.26□□□□□ -0.93
SEMA3A-202ENST00000420047 SPRYD7Q5W111 196 aa9.26□□□□□ -0.93
SEMA3A-202ENST00000420047 TRIM67Q6ZTA4 783 aa9.26□□□□□ -0.93
SEMA3A-202ENST00000420047 ZNF598Q86UK7 904 aaKnown RBP9.26□□□□□ -0.93
SEMA3A-202ENST00000420047 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.25□□□□□ -0.93
SEMA3A-202ENST00000420047 FCHSD2O94868 740 aa9.25□□□□□ -0.93
SEMA3A-202ENST00000420047 CFHP08603 1231 aa9.25□□□□□ -0.93
SEMA3A-202ENST00000420047 PRR20EP86478 221 aa9.25□□□□□ -0.93
SEMA3A-202ENST00000420047 PRR20CP86479 221 aa9.25□□□□□ -0.93
SEMA3A-202ENST00000420047 PRR20DP86480 221 aa9.25□□□□□ -0.93
SEMA3A-202ENST00000420047 PRR20BP86481 221 aa9.25□□□□□ -0.93
SEMA3A-202ENST00000420047 PRR20AP86496 221 aa9.25□□□□□ -0.93
SEMA3A-202ENST00000420047 EMID1Q96A84 441 aaPredicted RBP9.25□□□□□ -0.93
SEMA3A-202ENST00000420047 NR1I2O75469 434 aa9.24□□□□□ -0.93
SEMA3A-202ENST00000420047 TLL1O43897 1013 aa9.23□□□□□ -0.93
SEMA3A-202ENST00000420047 DGAT1O75907 488 aa9.23□□□□□ -0.93
SEMA3A-202ENST00000420047 OATP04181 439 aa9.23□□□□□ -0.93
SEMA3A-202ENST00000420047 P3H3Q8IVL6 736 aa9.23□□□□□ -0.93
SEMA3A-202ENST00000420047 S1PR4O95977 384 aa9.22□□□□□ -0.93
SEMA3A-202ENST00000420047 ADH1BP00325 375 aa9.22□□□□□ -0.93
SEMA3A-202ENST00000420047 SLC10A3P09131 477 aa9.22□□□□□ -0.93
SEMA3A-202ENST00000420047 RSPH4AQ5TD94 716 aa9.22□□□□□ -0.93
SEMA3A-202ENST00000420047 FAM161AQ3B820 660 aa9.21□□□□□ -0.94
SEMA3A-202ENST00000420047 PKDCCQ504Y2 493 aa9.21□□□□□ -0.94
SEMA3A-202ENST00000420047 LIAT1Q6ZQX7 453 aa9.2□□□□□ -0.94
SEMA3A-202ENST00000420047 PXYLP1Q8TE99 480 aa9.2□□□□□ -0.94
SEMA3A-202ENST00000420047 PPEF1O14829 653 aaPredicted RBP9.19□□□□□ -0.94
SEMA3A-202ENST00000420047 MYT1Q01538 1121 aa9.19□□□□□ -0.94
SEMA3A-202ENST00000420047 ZNF697Q5TEC3 545 aa9.19□□□□□ -0.94
SEMA3A-202ENST00000420047 SLC6A16Q9GZN6 736 aa9.19□□□□□ -0.94
SEMA3A-202ENST00000420047 SCUBE3Q8IX30 993 aa9.17□□□□□ -0.94
SEMA3A-202ENST00000420047 ZNF775Q96BV0 537 aaPredicted RBP9.17□□□□□ -0.94
SEMA3A-202ENST00000420047 GDF9O60383 454 aa9.16□□□□□ -0.94
SEMA3A-202ENST00000420047 HIC1Q14526 733 aa9.16□□□□□ -0.94
SEMA3A-202ENST00000420047 SEMA3EO15041 775 aa9.15□□□□□ -0.94
SEMA3A-202ENST00000420047 LMOD2Q6P5Q4 547 aa9.14□□□□□ -0.95
SEMA3A-202ENST00000420047 METTL3Q86U44 580 aaKnown RBP9.14□□□□□ -0.95
SEMA3A-202ENST00000420047 SPSB2Q99619 263 aa9.13□□□□□ -0.95
SEMA3A-202ENST00000420047 FAM187AA6NFU0 413 aa9.12□□□□□ -0.95
SEMA3A-202ENST00000420047 SMYD5Q6GMV2 418 aa9.12□□□□□ -0.95
SEMA3A-202ENST00000420047 TNFRSF10AO00220 468 aa9.11□□□□□ -0.95
SEMA3A-202ENST00000420047 PLA2G2CQ5R387 149 aa9.11□□□□□ -0.95
SEMA3A-202ENST00000420047 DAXXQ9UER7 740 aaPredicted RBP9.11□□□□□ -0.95
SEMA3A-202ENST00000420047 RPIAP49247 311 aa9.1□□□□□ -0.95
SEMA3A-202ENST00000420047 PUS10Q3MIT2 529 aaKnown RBP9.1□□□□□ -0.95
SEMA3A-202ENST00000420047 TESPA1A2RU30 521 aaPredicted RBP9.09□□□□□ -0.95
SEMA3A-202ENST00000420047 GNPATO15228 680 aa9.08□□□□□ -0.96
SEMA3A-202ENST00000420047 MORN1Q5T089 497 aa9.07□□□□□ -0.96
SEMA3A-202ENST00000420047 RDH13Q8NBN7 331 aa9.07□□□□□ -0.96
SEMA3A-202ENST00000420047 PKD2L1Q9P0L9 805 aa9.07□□□□□ -0.96
SEMA3A-202ENST00000420047 POTECB2RU33 542 aa9.06□□□□□ -0.96
SEMA3A-202ENST00000420047 CD2BP2O95400 341 aaKnown RBP9.06□□□□□ -0.96
SEMA3A-202ENST00000420047 ATP6V1AP38606 617 aa9.06□□□□□ -0.96
SEMA3A-202ENST00000420047 RBM26Q5T8P6 1007 aaKnown RBP9.06□□□□□ -0.96
SEMA3A-202ENST00000420047 THAP11Q96EK4 314 aa9.06□□□□□ -0.96
SEMA3A-202ENST00000420047 AAASQ9NRG9 546 aa9.06□□□□□ -0.96
SEMA3A-202ENST00000420047 SALL2Q9Y467 1007 aaPredicted RBP9.06□□□□□ -0.96
SEMA3A-202ENST00000420047 FMNL1O95466 1100 aaPredicted RBP9.05□□□□□ -0.96
SEMA3A-202ENST00000420047 SULF1Q8IWU6 871 aa9.05□□□□□ -0.96
SEMA3A-202ENST00000420047 GCGRP47871 477 aa9.04□□□□□ -0.96
SEMA3A-202ENST00000420047 FUT2Q10981 343 aa9.04□□□□□ -0.96
SEMA3A-202ENST00000420047 FOXC1Q12948 553 aa9.04□□□□□ -0.96
SEMA3A-202ENST00000420047 CRIPAKQ8N1N5 446 aa9.04□□□□□ -0.96
SEMA3A-202ENST00000420047 DDX11L8A8MPP1 907 aa9.03□□□□□ -0.96
SEMA3A-202ENST00000420047 FECHP22830 423 aa9.03□□□□□ -0.96
SEMA3A-202ENST00000420047 GPR37O15354 613 aa9.02□□□□□ -0.97
SEMA3A-202ENST00000420047 ST8SIA5O15466 376 aa9.02□□□□□ -0.97
SEMA3A-202ENST00000420047 AVPP01185 164 aa9.02□□□□□ -0.97
SEMA3A-202ENST00000420047 FAM160A2Q8N612 972 aaPredicted RBP9.02□□□□□ -0.97
SEMA3A-202ENST00000420047 TOR4AQ9NXH8 423 aa9.02□□□□□ -0.97
SEMA3A-202ENST00000420047 SLC27A5Q9Y2P5 690 aa9.02□□□□□ -0.97
SEMA3A-202ENST00000420047 FCF1Q9Y324 198 aaKnown RBP9.02□□□□□ -0.97
SEMA3A-202ENST00000420047 GRIPAP1Q4V328 841 aa9□□□□□ -0.97
SEMA3A-202ENST00000420047 BRICD5Q6PL45 260 aa9□□□□□ -0.97
SEMA3A-202ENST00000420047 CYP4X1Q8N118 509 aa9□□□□□ -0.97
SEMA3A-202ENST00000420047 CTC1Q2NKJ3 1217 aa8.99□□□□□ -0.97
SEMA3A-202ENST00000420047 MSS51Q4VC12 460 aa8.99□□□□□ -0.97
SEMA3A-202ENST00000420047 TREML4Q6UXN2 200 aa8.99□□□□□ -0.97
SEMA3A-202ENST00000420047 ZBTB24O43167 697 aaPredicted RBP8.97□□□□□ -0.97
SEMA3A-202ENST00000420047 SMCPP49901 116 aaPredicted RBP8.97□□□□□ -0.97
SEMA3A-202ENST00000420047 AXIN1O15169 862 aa8.96□□□□□ -0.98
SEMA3A-202ENST00000420047 PHOX2BQ99453 314 aa8.96□□□□□ -0.98
SEMA3A-202ENST00000420047 Q3C1V9 767 aa8.95□□□□□ -0.98
SEMA3A-202ENST00000420047 LCE2AQ5TA79 106 aaPredicted RBP8.95□□□□□ -0.98
SEMA3A-202ENST00000420047 NLRP7Q8WX94 980 aa8.95□□□□□ -0.98
SEMA3A-202ENST00000420047 PRDM9Q9NQV7 894 aa8.94□□□□□ -0.98
SEMA3A-202ENST00000420047 TTC24A2A3L6 582 aaPredicted RBP8.92□□□□□ -0.98
SEMA3A-202ENST00000420047 WNT7AO00755 349 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms