RNA–Protein interactions for RNA: ENST00000419180.6

NPIPB3-201, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 3

Gene NPIPB3, Length 910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-201ENST00000419180 AHDC1Q5TGY3 1603 aaPredicted RBP12.4□□□□□ -0.42
NPIPB3-201ENST00000419180 MEX3CQ5U5Q3 659 aaKnown RBP12.39□□□□□ -0.43
NPIPB3-201ENST00000419180 PROSER2Q86WR7 435 aaPredicted RBP12.39□□□□□ -0.43
NPIPB3-201ENST00000419180 SLAIN2Q9P270 581 aa12.38□□□□□ -0.43
NPIPB3-201ENST00000419180 RXRBP28702 533 aa12.37□□□□□ -0.43
NPIPB3-201ENST00000419180 RGS12O14924 1447 aa12.37□□□□□ -0.43
NPIPB3-201ENST00000419180 DIP2AQ14689 1571 aa12.36□□□□□ -0.43
NPIPB3-201ENST00000419180 PRKCSHP14314 528 aaPredicted RBP12.36□□□□□ -0.43
NPIPB3-201ENST00000419180 SLC26A8Q96RN1 970 aa12.36□□□□□ -0.43
NPIPB3-201ENST00000419180 TSPY4P0CV99 314 aa12.35□□□□□ -0.43
NPIPB3-201ENST00000419180 TSPY10P0CW01 314 aa12.35□□□□□ -0.43
NPIPB3-201ENST00000419180 ADGRB3O60242 1522 aa12.34□□□□□ -0.43
NPIPB3-201ENST00000419180 DUOX2Q9NRD8 1548 aa12.34□□□□□ -0.43
NPIPB3-201ENST00000419180 CHD2O14647 1828 aaKnown RBP12.33□□□□□ -0.44
NPIPB3-201ENST00000419180 ARXQ96QS3 562 aa12.32□□□□□ -0.44
NPIPB3-201ENST00000419180 STAG3Q9UJ98 1225 aa12.31□□□□□ -0.44
NPIPB3-201ENST00000419180 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.3□□□□□ -0.44
NPIPB3-201ENST00000419180 AFF2P51816 1311 aa12.3□□□□□ -0.44
NPIPB3-201ENST00000419180 SETBP1Q9Y6X0 1596 aa12.3□□□□□ -0.44
NPIPB3-201ENST00000419180 ERBINQ96RT1 1412 aa12.29□□□□□ -0.44
NPIPB3-201ENST00000419180 NCOA3Q9Y6Q9 1424 aa12.29□□□□□ -0.44
NPIPB3-201ENST00000419180 LMTK2Q8IWU2 1503 aa12.28□□□□□ -0.44
NPIPB3-201ENST00000419180 IDI1Q13907 227 aa12.27□□□□□ -0.45
NPIPB3-201ENST00000419180 PLEKHG1Q9ULL1 1385 aa12.27□□□□□ -0.45
NPIPB3-201ENST00000419180 ZFYVE9O95405 1425 aa12.27□□□□□ -0.45
NPIPB3-201ENST00000419180 NOS1P29475 1434 aa12.27□□□□□ -0.45
NPIPB3-201ENST00000419180 NHSL1Q5SYE7 1610 aa12.26□□□□□ -0.45
NPIPB3-201ENST00000419180 CROCC2H7BZ55 1655 aa12.26□□□□□ -0.45
NPIPB3-201ENST00000419180 NUTM2BA6NNL0 878 aaPredicted RBP12.26□□□□□ -0.45
NPIPB3-201ENST00000419180 NUTM2EB1AL46 878 aaPredicted RBP12.26□□□□□ -0.45
NPIPB3-201ENST00000419180 NUTM2AQ8IVF1 878 aaPredicted RBP12.26□□□□□ -0.45
NPIPB3-201ENST00000419180 KIF15Q9NS87 1388 aa12.26□□□□□ -0.45
NPIPB3-201ENST00000419180 RBM6P78332 1123 aaKnown RBP12.25□□□□□ -0.45
NPIPB3-201ENST00000419180 ATAD2Q6PL18 1390 aa12.25□□□□□ -0.45
NPIPB3-201ENST00000419180 SETD5Q9C0A6 1442 aa12.25□□□□□ -0.45
NPIPB3-201ENST00000419180 ASXL1Q8IXJ9 1541 aa12.25□□□□□ -0.45
NPIPB3-201ENST00000419180 NUTM2DQ5VT03 806 aaPredicted RBP12.24□□□□□ -0.45
NPIPB3-201ENST00000419180 CADPS2Q86UW7 1296 aa12.24□□□□□ -0.45
NPIPB3-201ENST00000419180 MYO5BQ9ULV0 1848 aa12.24□□□□□ -0.45
NPIPB3-201ENST00000419180 GCC2Q8IWJ2 1684 aa12.23□□□□□ -0.45
NPIPB3-201ENST00000419180 BRINP3Q76B58 766 aa12.23□□□□□ -0.45
NPIPB3-201ENST00000419180 C14orf37Q86TY3 774 aa12.23□□□□□ -0.45
NPIPB3-201ENST00000419180 BCANQ96GW7 911 aa12.23□□□□□ -0.45
NPIPB3-201ENST00000419180 ZRANB1Q9UGI0 708 aa12.23□□□□□ -0.45
NPIPB3-201ENST00000419180 EP400Q96L91 3159 aa12.22□□□□□ -0.45
NPIPB3-201ENST00000419180 MYOM3Q5VTT5 1437 aa12.22□□□□□ -0.45
NPIPB3-201ENST00000419180 KANK1Q14678 1352 aa12.22□□□□□ -0.45
NPIPB3-201ENST00000419180 RIMS2Q9UQ26 1411 aa12.21□□□□□ -0.45
NPIPB3-201ENST00000419180 ATF3P18847 181 aa12.21□□□□□ -0.45
NPIPB3-201ENST00000419180 C8orf37Q96NL8 207 aa12.21□□□□□ -0.45
NPIPB3-201ENST00000419180 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.21□□□□□ -0.45
NPIPB3-201ENST00000419180 C19orf44Q9H6X5 657 aa12.21□□□□□ -0.45
NPIPB3-201ENST00000419180 QTRT2Q9H974 415 aaKnown RBP12.21□□□□□ -0.45
NPIPB3-201ENST00000419180 DCCP43146 1447 aa12.2□□□□□ -0.46
NPIPB3-201ENST00000419180 ADAMTS13Q76LX8 1427 aa12.2□□□□□ -0.46
NPIPB3-201ENST00000419180 PNPLA6Q8IY17 1366 aa12.19□□□□□ -0.46
NPIPB3-201ENST00000419180 TMEM131LA2VDJ0 1609 aa12.19□□□□□ -0.46
NPIPB3-201ENST00000419180 TBX22Q9Y458 520 aa12.19□□□□□ -0.46
NPIPB3-201ENST00000419180 PIK3R4Q99570 1358 aa12.18□□□□□ -0.46
NPIPB3-201ENST00000419180 PPP1R15AO75807 674 aaPredicted RBP12.18□□□□□ -0.46
NPIPB3-201ENST00000419180 SLC52A1Q9NWF4 448 aa12.18□□□□□ -0.46
NPIPB3-201ENST00000419180 MST1RQ04912 1400 aa12.18□□□□□ -0.46
NPIPB3-201ENST00000419180 LRP5O75197 1615 aa12.18□□□□□ -0.46
NPIPB3-201ENST00000419180 NGLY1Q96IV0 654 aa12.17□□□□□ -0.46
NPIPB3-201ENST00000419180 ABCC5O15440 1437 aa12.17□□□□□ -0.46
NPIPB3-201ENST00000419180 TRPM2O94759 1503 aa12.16□□□□□ -0.46
NPIPB3-201ENST00000419180 RPRD2Q5VT52 1461 aaKnown RBP12.16□□□□□ -0.46
NPIPB3-201ENST00000419180 RRP7BPQ9NSQ0 103 aa12.16□□□□□ -0.46
NPIPB3-201ENST00000419180 XRN1Q8IZH2 1706 aaKnown RBP12.16□□□□□ -0.46
NPIPB3-201ENST00000419180 PTPRUQ92729 1446 aa12.15□□□□□ -0.46
NPIPB3-201ENST00000419180 LRRC59Q96AG4 307 aaKnown RBP12.15□□□□□ -0.46
NPIPB3-201ENST00000419180 UNC13BO14795 1591 aa12.13□□□□□ -0.47
NPIPB3-201ENST00000419180 ATRNO75882 1429 aa12.13□□□□□ -0.47
NPIPB3-201ENST00000419180 DAPK1P53355 1430 aa12.13□□□□□ -0.47
NPIPB3-201ENST00000419180 LAMC1P11047 1609 aa12.13□□□□□ -0.47
NPIPB3-201ENST00000419180 PTPN23Q9H3S7 1636 aa12.12□□□□□ -0.47
NPIPB3-201ENST00000419180 ADAMTS2O95450 1211 aa12.12□□□□□ -0.47
NPIPB3-201ENST00000419180 HDGFP51858 240 aaKnown RBP12.12□□□□□ -0.47
NPIPB3-201ENST00000419180 CCDC125Q86Z20 511 aa12.11□□□□□ -0.47
NPIPB3-201ENST00000419180 DDX17Q92841 729 aaKnown RBP12.11□□□□□ -0.47
NPIPB3-201ENST00000419180 TRPC5Q9UL62 973 aaPredicted RBP12.11□□□□□ -0.47
NPIPB3-201ENST00000419180 NALCNQ8IZF0 1738 aa12.11□□□□□ -0.47
NPIPB3-201ENST00000419180 NRXN3Q9Y4C0 1643 aa12.11□□□□□ -0.47
NPIPB3-201ENST00000419180 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.1□□□□□ -0.47
NPIPB3-201ENST00000419180 USP21Q9UK80 565 aa12.1□□□□□ -0.47
NPIPB3-201ENST00000419180 AMOTL2Q9Y2J4 779 aa12.1□□□□□ -0.47
NPIPB3-201ENST00000419180 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
NPIPB3-201ENST00000419180 COL22A1Q8NFW1 1626 aaPredicted RBP12.09□□□□□ -0.47
NPIPB3-201ENST00000419180 ADGRL3Q9HAR2 1447 aa12.09□□□□□ -0.47
NPIPB3-201ENST00000419180 ANKRD30AQ9BXX3 1397 aa12.08□□□□□ -0.48
NPIPB3-201ENST00000419180 FNBP4Q8N3X1 1017 aaPredicted RBP12.08□□□□□ -0.48
NPIPB3-201ENST00000419180 BLMP54132 1417 aaPredicted RBP12.07□□□□□ -0.48
NPIPB3-201ENST00000419180 KANK4Q5T7N3 995 aaPredicted RBP12.07□□□□□ -0.48
NPIPB3-201ENST00000419180 VPS8Q8N3P4 1428 aa12.06□□□□□ -0.48
NPIPB3-201ENST00000419180 MAPK8IP2Q13387 824 aaPredicted RBP12.06□□□□□ -0.48
NPIPB3-201ENST00000419180 ADGRL2O95490 1459 aa12.05□□□□□ -0.48
NPIPB3-201ENST00000419180 MYOM2P54296 1465 aa12.05□□□□□ -0.48
NPIPB3-201ENST00000419180 C1orf167Q5SNV9 1468 aa12.05□□□□□ -0.48
NPIPB3-201ENST00000419180 BCL9LQ86UU0 1499 aa12.05□□□□□ -0.48
NPIPB3-201ENST00000419180 E9PCH4 1651 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms