RNA–Protein interactions for RNA: ENST00000418288.5

RFC4-205, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-205ENST00000418288 ALG2Q9H553 416 aa6.56□□□□□ -1.36
RFC4-205ENST00000418288 TRPC6Q9Y210 931 aa6.56□□□□□ -1.36
RFC4-205ENST00000418288 PAK3O75914 559 aaPredicted RBP6.55□□□□□ -1.36
RFC4-205ENST00000418288 LMOD1P29536 600 aaPredicted RBP6.55□□□□□ -1.36
RFC4-205ENST00000418288 WASHC4Q2M389 1173 aa6.55□□□□□ -1.36
RFC4-205ENST00000418288 FAM161AQ3B820 660 aa6.55□□□□□ -1.36
RFC4-205ENST00000418288 DPY19L2Q6NUT2 758 aa6.55□□□□□ -1.36
RFC4-205ENST00000418288 ZNF710Q8N1W2 664 aa6.55□□□□□ -1.36
RFC4-205ENST00000418288 PXYLP1Q8TE99 480 aa6.55□□□□□ -1.36
RFC4-205ENST00000418288 SPIRE2Q8WWL2 714 aa6.55□□□□□ -1.36
RFC4-205ENST00000418288 SREK1Q8WXA9 508 aaKnown RBP6.55□□□□□ -1.36
RFC4-205ENST00000418288 SPATA32Q96LK8 384 aa6.55□□□□□ -1.36
RFC4-205ENST00000418288 DRC1Q96MC2 740 aa6.55□□□□□ -1.36
RFC4-205ENST00000418288 NDUFB9Q9Y6M9 179 aa6.55□□□□□ -1.36
RFC4-205ENST00000418288 PPM1GO15355 546 aaPredicted RBP6.54□□□□□ -1.36
RFC4-205ENST00000418288 EVI5O60447 810 aa6.54□□□□□ -1.36
RFC4-205ENST00000418288 LILRB3O75022 631 aa6.54□□□□□ -1.36
RFC4-205ENST00000418288 QPCTQ16769 361 aa6.54□□□□□ -1.36
RFC4-205ENST00000418288 PHLDB3Q6NSJ2 640 aa6.54□□□□□ -1.36
RFC4-205ENST00000418288 RSBN1LQ6PCB5 846 aaPredicted RBP6.54□□□□□ -1.36
RFC4-205ENST00000418288 SIRT1Q96EB6 747 aa6.54□□□□□ -1.36
RFC4-205ENST00000418288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.54□□□□□ -1.363e-9■□□□□ 9.5
RFC4-205ENST00000418288 SMARCA5O60264 1052 aaPredicted RBP6.53□□□□□ -1.36
RFC4-205ENST00000418288 AP1G2O75843 785 aa6.53□□□□□ -1.36
RFC4-205ENST00000418288 CDCA8Q53HL2 280 aa6.53□□□□□ -1.36
RFC4-205ENST00000418288 B4GALNT3Q6L9W6 998 aa6.53□□□□□ -1.36
RFC4-205ENST00000418288 TFIP11Q9UBB9 837 aaKnown RBP6.53□□□□□ -1.36
RFC4-205ENST00000418288 MAFBQ9Y5Q3 323 aaPredicted RBP6.53□□□□□ -1.36
RFC4-205ENST00000418288 OATP04181 439 aa6.52□□□□□ -1.37
RFC4-205ENST00000418288 VAC14Q08AM6 782 aa6.52□□□□□ -1.37
RFC4-205ENST00000418288 RTL5Q5HYW3 569 aaPredicted RBP6.52□□□□□ -1.37
RFC4-205ENST00000418288 ADGRG1Q9Y653 693 aa6.52□□□□□ -1.37
RFC4-205ENST00000418288 CCER1Q8TC90 406 aaPredicted RBP6.51□□□□□ -1.37
RFC4-205ENST00000418288 TMEM121BQ9BXQ6 578 aaPredicted RBP6.51□□□□□ -1.37
RFC4-205ENST00000418288 TRIM34Q9BYJ4 488 aa6.51□□□□□ -1.37
RFC4-205ENST00000418288 CADPSQ9ULU8 1353 aa6.51□□□□□ -1.37
RFC4-205ENST00000418288 VAMP1P23763 118 aa6.5□□□□□ -1.37
RFC4-205ENST00000418288 CSPP1Q1MSJ5 1256 aa6.5□□□□□ -1.37
RFC4-205ENST00000418288 TSR1Q2NL82 804 aaKnown RBP6.5□□□□□ -1.37
RFC4-205ENST00000418288 BCL2L13Q9BXK5 485 aa6.5□□□□□ -1.37
RFC4-205ENST00000418288 ZMIZ1Q9ULJ6 1067 aa6.5□□□□□ -1.37
RFC4-205ENST00000418288 MOXD2PA6NHM9 499 aa6.49□□□□□ -1.37
RFC4-205ENST00000418288 ELOAQ14241 798 aaKnown RBP6.49□□□□□ -1.37
RFC4-205ENST00000418288 TMEM164Q5U3C3 297 aa6.49□□□□□ -1.37
RFC4-205ENST00000418288 PRR7Q8TB68 274 aa6.49□□□□□ -1.37
RFC4-205ENST00000418288 GIPC2Q8TF65 315 aa6.49□□□□□ -1.37
RFC4-205ENST00000418288 L3MBTL3Q96JM7 780 aaPredicted RBP6.49□□□□□ -1.37
RFC4-205ENST00000418288 PHF12Q96QT6 1004 aa6.49□□□□□ -1.37
RFC4-205ENST00000418288 ANO8Q9HCE9 1232 aaPredicted RBP6.49□□□□□ -1.37
RFC4-205ENST00000418288 HMX1Q9NP08 348 aaPredicted RBP6.49□□□□□ -1.37
RFC4-205ENST00000418288 MAP3K7O43318 606 aa6.48□□□□□ -1.37
RFC4-205ENST00000418288 PRKAR2AP13861 404 aaKnown RBP6.48□□□□□ -1.37
RFC4-205ENST00000418288 CD46P15529 392 aa6.48□□□□□ -1.37
RFC4-205ENST00000418288 GJA5P36382 358 aa6.48□□□□□ -1.37
RFC4-205ENST00000418288 NPAS4Q8IUM7 802 aa6.48□□□□□ -1.37
RFC4-205ENST00000418288 DHX37Q8IY37 1157 aaKnown RBP6.48□□□□□ -1.37
RFC4-205ENST00000418288 EPAS1Q99814 870 aa6.48□□□□□ -1.37
RFC4-205ENST00000418288 CWC22Q9HCG8 908 aaKnown RBP6.48□□□□□ -1.37
RFC4-205ENST00000418288 PCDHB15Q9Y5E8 787 aa6.48□□□□□ -1.37
RFC4-205ENST00000418288 SOWAHDA6NJG2 315 aa6.47□□□□□ -1.37
RFC4-205ENST00000418288 PHF14O94880 888 aa6.47□□□□□ -1.37
RFC4-205ENST00000418288 ZC3H6P61129 1189 aaKnown RBP6.47□□□□□ -1.37
RFC4-205ENST00000418288 PADI6Q6TGC4 694 aa6.47□□□□□ -1.37
RFC4-205ENST00000418288 TBC1D9Q6ZT07 1266 aa6.47□□□□□ -1.37
RFC4-205ENST00000418288 PDCD7Q8N8D1 485 aaKnown RBP6.47□□□□□ -1.37
RFC4-205ENST00000418288 TTC13Q8NBP0 860 aa6.47□□□□□ -1.37
RFC4-205ENST00000418288 STK32AQ8WU08 396 aa6.47□□□□□ -1.37
RFC4-205ENST00000418288 UBXN4Q92575 508 aa6.47□□□□□ -1.37
RFC4-205ENST00000418288 SLAIN2Q9P270 581 aa6.47□□□□□ -1.37
RFC4-205ENST00000418288 KANK4Q5T7N3 995 aaPredicted RBP6.46□□□□□ -1.38
RFC4-205ENST00000418288 CABLES1Q8TDN4 633 aa6.46□□□□□ -1.38
RFC4-205ENST00000418288 TTLL13PA6NNM8 815 aa6.45□□□□□ -1.38
RFC4-205ENST00000418288 RECKO95980 971 aa6.45□□□□□ -1.38
RFC4-205ENST00000418288 C7P10643 843 aa6.45□□□□□ -1.38
RFC4-205ENST00000418288 NDUFV2P19404 249 aa6.45□□□□□ -1.38
RFC4-205ENST00000418288 SSFA2P28290 1259 aa6.45□□□□□ -1.38
RFC4-205ENST00000418288 SOX11P35716 441 aa6.45□□□□□ -1.38
RFC4-205ENST00000418288 TMEM92Q6UXU6 159 aa6.45□□□□□ -1.38
RFC4-205ENST00000418288 RBM33Q96EV2 1170 aaKnown RBP6.45□□□□□ -1.38
RFC4-205ENST00000418288 MS4A3Q96HJ5 214 aa6.45□□□□□ -1.38
RFC4-205ENST00000418288 ATP9BO43861 1147 aa6.44□□□□□ -1.38
RFC4-205ENST00000418288 ARID4AP29374 1257 aaPredicted RBP6.44□□□□□ -1.38
RFC4-205ENST00000418288 PRPF38BQ5VTL8 546 aaKnown RBP6.44□□□□□ -1.38
RFC4-205ENST00000418288 PCDHGA10Q9Y5H3 936 aa6.44□□□□□ -1.38
RFC4-205ENST00000418288 TIE1P35590 1138 aa6.43□□□□□ -1.38
RFC4-205ENST00000418288 MARSP56192 900 aaKnown RBP6.43□□□□□ -1.38
RFC4-205ENST00000418288 NAALADL2Q58DX5 795 aa6.43□□□□□ -1.38
RFC4-205ENST00000418288 LHX8Q68G74 356 aa6.43□□□□□ -1.38
RFC4-205ENST00000418288 POLR3GLQ9BT43 218 aa6.43□□□□□ -1.38
RFC4-205ENST00000418288 ZC3H4Q9UPT8 1303 aaKnown RBP6.43□□□□□ -1.38
RFC4-205ENST00000418288 ANKRD33BA6NCL7 494 aa6.42□□□□□ -1.38
RFC4-205ENST00000418288 SERPINB4P48594 390 aa6.42□□□□□ -1.38
RFC4-205ENST00000418288 FBXO33Q7Z6M2 555 aa6.42□□□□□ -1.38
RFC4-205ENST00000418288 ANKRD13AQ8IZ07 590 aa6.42□□□□□ -1.38
RFC4-205ENST00000418288 SLAIN1Q8ND83 568 aa6.42□□□□□ -1.38
RFC4-205ENST00000418288 PTCD2Q8WV60 388 aaKnown RBP6.42□□□□□ -1.38
RFC4-205ENST00000418288 RBM27Q9P2N5 1060 aaKnown RBP6.42□□□□□ -1.38
RFC4-205ENST00000418288 ZRANB1Q9UGI0 708 aa6.42□□□□□ -1.38
RFC4-205ENST00000418288 BOLA1Q9Y3E2 137 aa6.42□□□□□ -1.38
RFC4-205ENST00000418288 NUTM2BA6NNL0 878 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms