RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 KNSTRNQ9Y448 316 aa22.49■■□□□ 1.19
PMS1-206ENST00000418224 NUP160Q12769 1436 aa22.48■■□□□ 1.19
PMS1-206ENST00000418224 ARHGEF5Q12774 1597 aa22.48■■□□□ 1.19
PMS1-206ENST00000418224 PODXL2Q9NZ53 605 aa22.47■■□□□ 1.19
PMS1-206ENST00000418224 RSPH4AQ5TD94 716 aa22.47■■□□□ 1.19
PMS1-206ENST00000418224 PLEKHG5O94827 1062 aa22.46■■□□□ 1.19
PMS1-206ENST00000418224 BECN1Q14457 450 aa22.46■■□□□ 1.19
PMS1-206ENST00000418224 SAMD9LQ8IVG5 1584 aa22.46■■□□□ 1.19
PMS1-206ENST00000418224 SPRYD3Q8NCJ5 442 aa22.46■■□□□ 1.19
PMS1-206ENST00000418224 SEC24BO95487 1268 aa22.45■■□□□ 1.18
PMS1-206ENST00000418224 ZMYM4Q5VZL5 1548 aa22.44■■□□□ 1.18
PMS1-206ENST00000418224 PPP2R1AP30153 589 aa22.43■■□□□ 1.18
PMS1-206ENST00000418224 PRDM15P57071 1507 aaPredicted RBP22.43■■□□□ 1.18
PMS1-206ENST00000418224 PLEKHH1Q9ULM0 1364 aa22.43■■□□□ 1.18
PMS1-206ENST00000418224 SYCP2Q9BX26 1530 aa22.42■■□□□ 1.18
PMS1-206ENST00000418224 PLEKHH2Q8IVE3 1493 aa22.42■■□□□ 1.18
PMS1-206ENST00000418224 DUSP27Q5VZP5 1158 aa22.42■■□□□ 1.18
PMS1-206ENST00000418224 USP19O94966 1318 aa22.42■■□□□ 1.18
PMS1-206ENST00000418224 GOLGA2Q08379 1002 aa22.41■■□□□ 1.18
PMS1-206ENST00000418224 CCDC146Q8IYE0 955 aa22.4■■□□□ 1.18
PMS1-206ENST00000418224 INSRP06213 1382 aa22.4■■□□□ 1.18
PMS1-206ENST00000418224 ARHGAP5Q13017 1502 aa22.39■■□□□ 1.18
PMS1-206ENST00000418224 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.39■■□□□ 1.18
PMS1-206ENST00000418224 CDC42BPBQ9Y5S2 1711 aa22.38■■□□□ 1.17
PMS1-206ENST00000418224 MAGI2Q86UL8 1455 aa22.35■■□□□ 1.17
PMS1-206ENST00000418224 PREX2Q70Z35 1606 aa22.35■■□□□ 1.17
PMS1-206ENST00000418224 EIF2AK4Q9P2K8 1649 aaKnown RBP22.34■■□□□ 1.17
PMS1-206ENST00000418224 MYO5CQ9NQX4 1742 aa22.34■■□□□ 1.17
PMS1-206ENST00000418224 FSD2A1L4K1 749 aa22.33■■□□□ 1.17
PMS1-206ENST00000418224 AMER1Q5JTC6 1135 aaPredicted RBP22.33■■□□□ 1.17
PMS1-206ENST00000418224 ANTXR1Q9H6X2 564 aa22.33■■□□□ 1.17
PMS1-206ENST00000418224 LAMC1P11047 1609 aa22.32■■□□□ 1.16
PMS1-206ENST00000418224 UNC13BO14795 1591 aa22.32■■□□□ 1.16
PMS1-206ENST00000418224 ESPNB1AK53 854 aa22.31■■□□□ 1.16
PMS1-206ENST00000418224 IGHDP01880 384 aa22.31■■□□□ 1.16
PMS1-206ENST00000418224 MYH16Q9H6N6 1097 aa22.31■■□□□ 1.16
PMS1-206ENST00000418224 WDR7Q9Y4E6 1490 aa22.31■■□□□ 1.16
PMS1-206ENST00000418224 APAF1O14727 1248 aa22.31■■□□□ 1.16
PMS1-206ENST00000418224 SLFN5Q08AF3 891 aa22.3■■□□□ 1.16
PMS1-206ENST00000418224 MCM4P33991 863 aa22.3■■□□□ 1.16
PMS1-206ENST00000418224 CDCA8Q53HL2 280 aa22.29■■□□□ 1.16
PMS1-206ENST00000418224 ERBB4Q15303 1308 aa22.29■■□□□ 1.16
PMS1-206ENST00000418224 ZNF521Q96K83 1311 aa22.29■■□□□ 1.16
PMS1-206ENST00000418224 BCAR3O75815 825 aa22.28■■□□□ 1.16
PMS1-206ENST00000418224 TBC1D2Q9BYX2 928 aa22.28■■□□□ 1.16
PMS1-206ENST00000418224 SPINK5Q9NQ38 1064 aaPredicted RBP22.28■■□□□ 1.16
PMS1-206ENST00000418224 TTC37Q6PGP7 1564 aa22.27■■□□□ 1.16
PMS1-206ENST00000418224 TRAK2O60296 914 aa22.27■■□□□ 1.16
PMS1-206ENST00000418224 IQGAP3Q86VI3 1631 aa22.27■■□□□ 1.16
PMS1-206ENST00000418224 MRE11P49959 708 aa22.26■■□□□ 1.15
PMS1-206ENST00000418224 TRIM44Q96DX7 344 aaPredicted RBP22.26■■□□□ 1.15
PMS1-206ENST00000418224 UPF2Q9HAU5 1272 aaKnown RBP22.25■■□□□ 1.15
PMS1-206ENST00000418224 GRPEL1Q9HAV7 217 aa22.23■■□□□ 1.15
PMS1-206ENST00000418224 CANXP27824 592 aaKnown RBP22.23■■□□□ 1.15
PMS1-206ENST00000418224 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.22■■□□□ 1.15
PMS1-206ENST00000418224 DUOX2Q9NRD8 1548 aa22.22■■□□□ 1.15
PMS1-206ENST00000418224 MAST1Q9Y2H9 1570 aa22.22■■□□□ 1.15
PMS1-206ENST00000418224 A0A0U1RQG5 324 aaPredicted RBP22.21■■□□□ 1.15
PMS1-206ENST00000418224 PDCL3Q9H2J4 239 aa22.21■■□□□ 1.15
PMS1-206ENST00000418224 ASXL1Q8IXJ9 1541 aa22.2■■□□□ 1.15
PMS1-206ENST00000418224 ATP10AO60312 1499 aa22.2■■□□□ 1.14
PMS1-206ENST00000418224 DMRT2Q9Y5R5 561 aa22.19■■□□□ 1.14
PMS1-206ENST00000418224 RNF17Q9BXT8 1623 aaKnown RBP22.18■■□□□ 1.14
PMS1-206ENST00000418224 PLXNC1O60486 1568 aa22.18■■□□□ 1.14
PMS1-206ENST00000418224 NKTRP30414 1462 aaKnown RBP22.18■■□□□ 1.14
PMS1-206ENST00000418224 SCAF11Q99590 1463 aaKnown RBP22.18■■□□□ 1.14
PMS1-206ENST00000418224 PIK3C2GO75747 1445 aa22.17■■□□□ 1.14
PMS1-206ENST00000418224 E9PSI1 815 aa22.17■■□□□ 1.14
PMS1-206ENST00000418224 TPM2P07951 284 aa22.17■■□□□ 1.14
PMS1-206ENST00000418224 RBM10P98175 930 aaKnown RBP22.17■■□□□ 1.14
PMS1-206ENST00000418224 EFCAB2Q5VUJ9 269 aa22.17■■□□□ 1.14
PMS1-206ENST00000418224 NEUROD2Q15784 382 aa22.16■■□□□ 1.14
PMS1-206ENST00000418224 KIAA1211Q6ZU35 1233 aa22.16■■□□□ 1.14
PMS1-206ENST00000418224 TRMT2AQ8IZ69 625 aaKnown RBP22.16■■□□□ 1.14
PMS1-206ENST00000418224 MAPK8IP3Q9UPT6 1336 aa22.16■■□□□ 1.14
PMS1-206ENST00000418224 COG6Q9Y2V7 657 aa22.15■■□□□ 1.14
PMS1-206ENST00000418224 PANK1Q8TE04 598 aa22.15■■□□□ 1.14
PMS1-206ENST00000418224 TBC1D32Q96NH3 1257 aa22.15■■□□□ 1.14
PMS1-206ENST00000418224 EIF3AQ14152 1382 aaKnown RBP22.14■■□□□ 1.13
PMS1-206ENST00000418224 MADDQ8WXG6 1647 aa22.14■■□□□ 1.13
PMS1-206ENST00000418224 SYNMO15061 1565 aa22.14■■□□□ 1.13
PMS1-206ENST00000418224 TNNT2P45379 298 aaPredicted RBP22.12■■□□□ 1.13
PMS1-206ENST00000418224 CHMP5Q9NZZ3 219 aa22.12■■□□□ 1.13
PMS1-206ENST00000418224 SPAG9O60271 1321 aaKnown RBP22.12■■□□□ 1.13
PMS1-206ENST00000418224 CENPJQ9HC77 1338 aaPredicted RBP22.12■■□□□ 1.13
PMS1-206ENST00000418224 AFAP1Q8N556 730 aa22.12■■□□□ 1.13
PMS1-206ENST00000418224 CFAP70Q5T0N1 1121 aa22.12■■□□□ 1.13
PMS1-206ENST00000418224 IQGAP1P46940 1657 aa22.11■■□□□ 1.13
PMS1-206ENST00000418224 ARID3AQ99856 593 aa22.11■■□□□ 1.13
PMS1-206ENST00000418224 TRAPPC8Q9Y2L5 1435 aa22.11■■□□□ 1.13
PMS1-206ENST00000418224 CGNL1Q0VF96 1302 aa22.1■■□□□ 1.13
PMS1-206ENST00000418224 CLUAP1Q96AJ1 413 aa22.09■■□□□ 1.13
PMS1-206ENST00000418224 RRP7AQ9Y3A4 280 aaKnown RBP22.09■■□□□ 1.13
PMS1-206ENST00000418224 CLASP1Q7Z460 1538 aa22.09■■□□□ 1.13
PMS1-206ENST00000418224 NLRP1Q9C000 1473 aa22.09■■□□□ 1.13
PMS1-206ENST00000418224 GAS2L3Q86XJ1 694 aa22.08■■□□□ 1.13
PMS1-206ENST00000418224 CARD14Q9BXL6 1004 aa22.08■■□□□ 1.13
PMS1-206ENST00000418224 CALD1Q05682 793 aaKnown RBP22.07■■□□□ 1.12
PMS1-206ENST00000418224 NPC1L1Q9UHC9 1359 aa22.07■■□□□ 1.12
PMS1-206ENST00000418224 FAM13BQ9NYF5 915 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms