RNA–Protein interactions for RNA: ENST00000418212.5

BDNF-208, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,125 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-208ENST00000418212 CDK13Q14004 1512 aaKnown RBP16.54■□□□□ 0.24
BDNF-208ENST00000418212 NAP1L5Q96NT1 182 aaPredicted RBP16.53■□□□□ 0.24
BDNF-208ENST00000418212 IFT140Q96RY7 1462 aa16.53■□□□□ 0.24
BDNF-208ENST00000418212 HFM1A2PYH4 1435 aa16.53■□□□□ 0.24
BDNF-208ENST00000418212 CENPQQ7L2Z9 268 aaPredicted RBP16.52■□□□□ 0.24
BDNF-208ENST00000418212 TAF7LQ5H9L4 462 aa16.52■□□□□ 0.24
BDNF-208ENST00000418212 PRAM1Q96QH2 718 aa16.52■□□□□ 0.24
BDNF-208ENST00000418212 TCP11L2Q8N4U5 519 aa16.52■□□□□ 0.23
BDNF-208ENST00000418212 PANK1Q8TE04 598 aa16.52■□□□□ 0.23
BDNF-208ENST00000418212 RUNDC1Q96C34 613 aa16.52■□□□□ 0.23
BDNF-208ENST00000418212 TXNDC2Q86VQ3 553 aa16.51■□□□□ 0.23
BDNF-208ENST00000418212 ISY1Q9ULR0 285 aaKnown RBP16.51■□□□□ 0.23
BDNF-208ENST00000418212 NLRP6P59044 892 aa16.5■□□□□ 0.23
BDNF-208ENST00000418212 STAC3Q96MF2 364 aa16.5■□□□□ 0.23
BDNF-208ENST00000418212 CHMP4AQ9BY43 222 aa16.5■□□□□ 0.23
BDNF-208ENST00000418212 VSIG10Q8N0Z9 540 aa16.49■□□□□ 0.23
BDNF-208ENST00000418212 TIAM1Q13009 1591 aa16.49■□□□□ 0.23
BDNF-208ENST00000418212 NAIPQ13075 1403 aa16.49■□□□□ 0.23
BDNF-208ENST00000418212 PPP2R1AP30153 589 aa16.49■□□□□ 0.23
BDNF-208ENST00000418212 FOXD4L5Q5VV16 416 aaPredicted RBP16.49■□□□□ 0.23
BDNF-208ENST00000418212 DZIP1LQ8IYY4 767 aaKnown RBP16.49■□□□□ 0.23
BDNF-208ENST00000418212 FOXD4L4Q8WXT5 416 aaPredicted RBP16.49■□□□□ 0.23
BDNF-208ENST00000418212 RILPL2Q969X0 211 aa16.49■□□□□ 0.23
BDNF-208ENST00000418212 KIAA1107Q9UPP5 1409 aa16.49■□□□□ 0.23
BDNF-208ENST00000418212 C1orf141Q5JVX7 400 aa16.49■□□□□ 0.23
BDNF-208ENST00000418212 MIA2Q96PC5 1412 aa16.48■□□□□ 0.23
BDNF-208ENST00000418212 CDK11BP21127 795 aaKnown RBP16.48■□□□□ 0.23
BDNF-208ENST00000418212 SLC26A8Q96RN1 970 aa16.48■□□□□ 0.23
BDNF-208ENST00000418212 UBE2Q2Q8WVN8 375 aa16.47■□□□□ 0.23
BDNF-208ENST00000418212 C11orf95C9JLR9 678 aaPredicted RBP16.47■□□□□ 0.23
BDNF-208ENST00000418212 FAM161AQ3B820 660 aa16.47■□□□□ 0.23
BDNF-208ENST00000418212 CFAP44Q96MT7 982 aa16.47■□□□□ 0.23
BDNF-208ENST00000418212 FKBP5Q13451 457 aaPredicted RBP16.47■□□□□ 0.23
BDNF-208ENST00000418212 EFCAB5A4FU69 1503 aa16.46■□□□□ 0.23
BDNF-208ENST00000418212 PLB1Q6P1J6 1458 aa16.46■□□□□ 0.23
BDNF-208ENST00000418212 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.46■□□□□ 0.23
BDNF-208ENST00000418212 BRPF3Q9ULD4 1205 aa16.46■□□□□ 0.23
BDNF-208ENST00000418212 LNPKQ9C0E8 428 aa16.46■□□□□ 0.22
BDNF-208ENST00000418212 EPRSP07814 1512 aaKnown RBP16.45■□□□□ 0.22
BDNF-208ENST00000418212 GTF2E1P29083 439 aaPredicted RBP16.45■□□□□ 0.22
BDNF-208ENST00000418212 EVA1CP58658 441 aa16.45■□□□□ 0.22
BDNF-208ENST00000418212 FOXD4L6Q3SYB3 417 aaPredicted RBP16.45■□□□□ 0.22
BDNF-208ENST00000418212 FOXD4L3Q6VB84 417 aaPredicted RBP16.45■□□□□ 0.22
BDNF-208ENST00000418212 DNMBPQ6XZF7 1577 aa16.45■□□□□ 0.22
BDNF-208ENST00000418212 CABP1Q9NZU7 370 aa16.45■□□□□ 0.22
BDNF-208ENST00000418212 DAPK1P53355 1430 aa16.44■□□□□ 0.22
BDNF-208ENST00000418212 GBP4Q96PP9 640 aa16.44■□□□□ 0.22
BDNF-208ENST00000418212 PNISRQ8TF01 805 aaKnown RBP16.44■□□□□ 0.22
BDNF-208ENST00000418212 KIAA0586Q9BVV6 1533 aa16.44■□□□□ 0.22
BDNF-208ENST00000418212 ABCA10Q8WWZ4 1543 aa16.43■□□□□ 0.22
BDNF-208ENST00000418212 A0A0U1RQG5 324 aaPredicted RBP16.43■□□□□ 0.22
BDNF-208ENST00000418212 SYTL4Q96C24 671 aaPredicted RBP16.43■□□□□ 0.22
BDNF-208ENST00000418212 DDX19BQ9UMR2 479 aa16.43■□□□□ 0.22
BDNF-208ENST00000418212 PRKAR2BP31323 418 aa16.43■□□□□ 0.22
BDNF-208ENST00000418212 WDR97A6NE52 1622 aa16.43■□□□□ 0.22
BDNF-208ENST00000418212 TSPYL4Q9UJ04 414 aa16.43■□□□□ 0.22
BDNF-208ENST00000418212 HDAC5Q9UQL6 1122 aa16.43■□□□□ 0.22
BDNF-208ENST00000418212 BRD4O60885 1362 aaPredicted RBP16.42■□□□□ 0.22
BDNF-208ENST00000418212 C9orf78Q9NZ63 289 aaPredicted RBP16.42■□□□□ 0.22
BDNF-208ENST00000418212 ARHGEF11O15085 1522 aa16.42■□□□□ 0.22
BDNF-208ENST00000418212 EHBP1L1Q8N3D4 1523 aa16.42■□□□□ 0.22
BDNF-208ENST00000418212 GNL2Q13823 731 aaKnown RBP16.41■□□□□ 0.22
BDNF-208ENST00000418212 AMER1Q5JTC6 1135 aaPredicted RBP16.41■□□□□ 0.22
BDNF-208ENST00000418212 TSR2Q969E8 191 aaKnown RBP16.41■□□□□ 0.22
BDNF-208ENST00000418212 NLRP2Q9NX02 1062 aa16.41■□□□□ 0.22
BDNF-208ENST00000418212 GPATCH3Q96I76 525 aa16.41■□□□□ 0.22
BDNF-208ENST00000418212 USP35Q9P2H5 1018 aa16.4■□□□□ 0.22
BDNF-208ENST00000418212 ABTB2Q8N961 1025 aa16.39■□□□□ 0.21
BDNF-208ENST00000418212 RSPH6AQ9H0K4 717 aa16.39■□□□□ 0.21
BDNF-208ENST00000418212 TTC5Q8N0Z6 440 aa16.39■□□□□ 0.21
BDNF-208ENST00000418212 BCAR3O75815 825 aa16.39■□□□□ 0.21
BDNF-208ENST00000418212 GNAI1P63096 354 aa16.38■□□□□ 0.21
BDNF-208ENST00000418212 EXOSC9Q06265 439 aaKnown RBP16.38■□□□□ 0.21
BDNF-208ENST00000418212 API5Q9BZZ5 524 aaKnown RBP16.38■□□□□ 0.21
BDNF-208ENST00000418212 TOMM22Q9NS69 142 aa16.38■□□□□ 0.21
BDNF-208ENST00000418212 FRAT2O75474 233 aaPredicted RBP16.38■□□□□ 0.21
BDNF-208ENST00000418212 GSE1Q14687 1217 aa16.38■□□□□ 0.21
BDNF-208ENST00000418212 CDK19Q9BWU1 502 aa16.38■□□□□ 0.21
BDNF-208ENST00000418212 ZNF608Q9ULD9 1512 aaPredicted RBP16.37■□□□□ 0.21
BDNF-208ENST00000418212 AIMP1Q12904 312 aaKnown RBP16.37■□□□□ 0.21
BDNF-208ENST00000418212 ZNF428Q96B54 188 aa16.37■□□□□ 0.21
BDNF-208ENST00000418212 SLC52A1Q9NWF4 448 aa16.37■□□□□ 0.21
BDNF-208ENST00000418212 HSP90B1P14625 803 aaKnown RBP16.36■□□□□ 0.21
BDNF-208ENST00000418212 ESCO1Q5FWF5 840 aa16.36■□□□□ 0.21
BDNF-208ENST00000418212 AKNAQ7Z591 1439 aa16.36■□□□□ 0.21
BDNF-208ENST00000418212 NEXNQ0ZGT2 675 aa16.36■□□□□ 0.21
BDNF-208ENST00000418212 RAPGEF4Q8WZA2 1011 aa16.36■□□□□ 0.21
BDNF-208ENST00000418212 ATF3P18847 181 aa16.35■□□□□ 0.21
BDNF-208ENST00000418212 L1TD1Q5T7N2 865 aaKnown RBP16.35■□□□□ 0.21
BDNF-208ENST00000418212 DRC7Q8IY82 874 aa16.35■□□□□ 0.21
BDNF-208ENST00000418212 ST18O60284 1047 aa16.35■□□□□ 0.21
BDNF-208ENST00000418212 SULT6B1Q6IMI4 303 aa16.35■□□□□ 0.21
BDNF-208ENST00000418212 KIF16BQ96L93 1317 aa16.34■□□□□ 0.21
BDNF-208ENST00000418212 PCF11O94913 1555 aaKnown RBP16.34■□□□□ 0.21
BDNF-208ENST00000418212 RRS1Q15050 365 aaKnown RBP16.32■□□□□ 0.2
BDNF-208ENST00000418212 WAPLQ7Z5K2 1190 aa16.32■□□□□ 0.2
BDNF-208ENST00000418212 ANKRD30BQ9BXX2 1392 aa16.32■□□□□ 0.2
BDNF-208ENST00000418212 ABCC5O15440 1437 aa16.32■□□□□ 0.2
BDNF-208ENST00000418212 MSNP26038 577 aaKnown RBP16.32■□□□□ 0.2
BDNF-208ENST00000418212 C1orf115Q9H7X2 142 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms