RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 FANCAO15360 1455 aa15.32■□□□□ 0.04
CSPG4P3Y-201ENST00000418188 PAK3O75914 559 aaPredicted RBP15.32■□□□□ 0.04
CSPG4P3Y-201ENST00000418188 MS4A1P11836 297 aa15.32■□□□□ 0.04
CSPG4P3Y-201ENST00000418188 CCDC146Q8IYE0 955 aa15.31■□□□□ 0.04
CSPG4P3Y-201ENST00000418188 TRPM2O94759 1503 aa15.3■□□□□ 0.04
CSPG4P3Y-201ENST00000418188 ZMYM4Q5VZL5 1548 aa15.3■□□□□ 0.04
CSPG4P3Y-201ENST00000418188 WDR7Q9Y4E6 1490 aa15.29■□□□□ 0.04
CSPG4P3Y-201ENST00000418188 ADGRL1O94910 1474 aa15.29■□□□□ 0.04
CSPG4P3Y-201ENST00000418188 DAXXQ9UER7 740 aaPredicted RBP15.28■□□□□ 0.04
CSPG4P3Y-201ENST00000418188 PTPRTO14522 1441 aa15.28■□□□□ 0.04
CSPG4P3Y-201ENST00000418188 ZFYVE16Q7Z3T8 1539 aa15.27■□□□□ 0.04
CSPG4P3Y-201ENST00000418188 ASXL1Q8IXJ9 1541 aa15.27■□□□□ 0.04
CSPG4P3Y-201ENST00000418188 APAF1O14727 1248 aa15.27■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 BCL11AQ9H165 835 aa15.27■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 GGT6Q6P531 493 aa15.27■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 CANXP27824 592 aaKnown RBP15.26■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 ATP7AQ04656 1500 aa15.26■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 ADGRF5Q8IZF2 1346 aa15.26■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 DUSP27Q5VZP5 1158 aa15.26■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 BACH2Q9BYV9 841 aa15.26■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 ARAP3Q8WWN8 1544 aa15.26■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 MADDQ8WXG6 1647 aa15.25■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 DEKP35659 375 aaKnown RBP15.25■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 C20orf194Q5TEA3 1177 aa15.24■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 PLEKHH1Q9ULM0 1364 aa15.24■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 TRAK1Q9UPV9 953 aa15.24■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 RNF17Q9BXT8 1623 aaKnown RBP15.24■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 PIK3C2GO75747 1445 aa15.24■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 CENPQQ7L2Z9 268 aaPredicted RBP15.24■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 CENPJQ9HC77 1338 aaPredicted RBP15.23■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 CLASP1Q7Z460 1538 aa15.23■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 TNNT2P45379 298 aaPredicted RBP15.23■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 MORC1Q86VD1 984 aa15.23■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 NPC1L1Q9UHC9 1359 aa15.23■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 DDRGK1Q96HY6 314 aa15.22■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 E9PSI1 815 aa15.22■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 SLFN5Q08AF3 891 aa15.22■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 SYNMO15061 1565 aa15.22■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 CLTCL1P53675 1640 aa15.22■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 SPHKAPQ2M3C7 1700 aa15.21■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 NGEFQ8N5V2 710 aa15.21■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 TET3O43151 1660 aa15.21■□□□□ 0.03
CSPG4P3Y-201ENST00000418188 NEUROD2Q15784 382 aa15.2■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 ASXL2Q76L83 1435 aa15.19■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 IQGAP1P46940 1657 aa15.18■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 CFAP53Q96M91 514 aa15.18■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 RGS3P49796 1198 aa15.18■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 CEP152O94986 1710 aa15.18■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 SKAP1Q86WV1 359 aa15.18■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 LAS1LQ9Y4W2 734 aaKnown RBP15.18■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 ZNF521Q96K83 1311 aa15.17■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 CARD14Q9BXL6 1004 aa15.17■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 NOS1P29475 1434 aa15.16■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 UGGT1Q9NYU2 1555 aa15.16■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 TMEM132EQ6IEE7 984 aa15.16■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 KDM5AP29375 1690 aaKnown RBP15.15■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 PPM1GO15355 546 aaPredicted RBP15.15■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 MYOM2P54296 1465 aa15.15■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 ZNF518AQ6AHZ1 1483 aa15.15■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 SLC12A5Q9H2X9 1139 aa15.15■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 NKTRP30414 1462 aaKnown RBP15.15■□□□□ 0.02
CSPG4P3Y-201ENST00000418188 NEFMP07197 916 aa15.14■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 BCAR3O75815 825 aa15.14■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 DEPDC5O75140 1603 aa15.14■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 INO80Q9ULG1 1556 aaPredicted RBP15.14■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 ERVK-7P63135 1459 aa15.14■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 FRAT1Q92837 279 aaPredicted RBP15.14■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 FAM161AQ3B820 660 aa15.13■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 CGNL1Q0VF96 1302 aa15.13■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 NUTM2DQ5VT03 806 aaPredicted RBP15.13■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 NSD3Q9BZ95 1437 aa15.13■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 VGFO15240 615 aaPredicted RBP15.12■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 C14orf93Q9H972 538 aaKnown RBP15.12■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 MAP3K4Q9Y6R4 1608 aa15.12■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 SPINK5Q9NQ38 1064 aaPredicted RBP15.12■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 RRP7AQ9Y3A4 280 aaKnown RBP15.12■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 RPGRIP1LQ68CZ1 1315 aa15.11■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 ABCA9Q8IUA7 1624 aa15.11■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 CD109Q6YHK3 1445 aa15.11■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 RUNDC1Q96C34 613 aa15.11■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 KDM2BQ8NHM5 1336 aa15.11■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 SBNO2Q9Y2G9 1366 aa15.11■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 EVC2Q86UK5 1308 aa15.11■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 EFCAB6Q5THR3 1501 aa15.11■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 VWDEQ8N2E2 1590 aa15.11■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 WWC1Q8IX03 1113 aa15.1■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 SENP3Q9H4L4 574 aaPredicted RBP15.1■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 SAFB2Q14151 953 aaKnown RBP eCLIP15.1■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 POLR3AO14802 1390 aaPredicted RBP15.1■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 OSCARQ8IYS5 282 aa15.1■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 TRMT2AQ8IZ69 625 aaKnown RBP15.09■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 KIF1BO60333 1816 aa15.09■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 MTHFSP49914 203 aa15.09■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 KIAA1210Q9ULL0 1709 aa15.09■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 PDE3AQ14432 1141 aa15.08■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 TCP11L2Q8N4U5 519 aa15.08■□□□□ 0.01
CSPG4P3Y-201ENST00000418188 U2AF1L5P0DN76 240 aaPredicted RBP15.08■□□□□ 0
CSPG4P3Y-201ENST00000418188 U2AF1Q01081 240 aaKnown RBP eCLIP15.08■□□□□ 0
CSPG4P3Y-201ENST00000418188 USP35Q9P2H5 1018 aa15.08■□□□□ 0
CSPG4P3Y-201ENST00000418188 ABCA6Q8N139 1617 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms