RNA–Protein interactions for RNA: ENST00000417437.6

VNN3-205, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-205ENST00000417437 SLIT1O75093 1534 aa9.81□□□□□ -0.84
VNN3-205ENST00000417437 DHX57Q6P158 1386 aaKnown RBP9.8□□□□□ -0.84
VNN3-205ENST00000417437 JCADQ9P266 1359 aa9.8□□□□□ -0.84
VNN3-205ENST00000417437 HOXD11P31277 338 aaPredicted RBP9.8□□□□□ -0.84
VNN3-205ENST00000417437 C1QBPQ07021 282 aaKnown RBP9.8□□□□□ -0.84
VNN3-205ENST00000417437 ZNF772Q68DY9 489 aaPredicted RBP9.8□□□□□ -0.84
VNN3-205ENST00000417437 SLAIN2Q9P270 581 aa9.8□□□□□ -0.84
VNN3-205ENST00000417437 PIK3C2BO00750 1634 aa9.8□□□□□ -0.84
VNN3-205ENST00000417437 ARHGAP23Q9P227 1491 aa9.79□□□□□ -0.84
VNN3-205ENST00000417437 TMEM2Q9UHN6 1383 aa9.79□□□□□ -0.84
VNN3-205ENST00000417437 DUOX2Q9NRD8 1548 aa9.79□□□□□ -0.84
VNN3-205ENST00000417437 KANK4Q5T7N3 995 aaPredicted RBP9.79□□□□□ -0.84
VNN3-205ENST00000417437 RRP7BPQ9NSQ0 103 aa9.79□□□□□ -0.84
VNN3-205ENST00000417437 RRBP1Q9P2E9 1410 aaKnown RBP9.79□□□□□ -0.84
VNN3-205ENST00000417437 MAST1Q9Y2H9 1570 aa9.79□□□□□ -0.84
VNN3-205ENST00000417437 PPP1R15AO75807 674 aaPredicted RBP9.78□□□□□ -0.84
VNN3-205ENST00000417437 MYT1Q01538 1121 aa9.78□□□□□ -0.84
VNN3-205ENST00000417437 EFCAB6Q5THR3 1501 aa9.77□□□□□ -0.84
VNN3-205ENST00000417437 HDGFP51858 240 aaKnown RBP9.77□□□□□ -0.85
VNN3-205ENST00000417437 UPF1Q92900 1129 aaKnown RBP eCLIP9.77□□□□□ -0.85
VNN3-205ENST00000417437 MROH1Q8NDA8 1641 aa9.77□□□□□ -0.85
VNN3-205ENST00000417437 RXRBP28702 533 aa9.76□□□□□ -0.85
VNN3-205ENST00000417437 IDI1Q13907 227 aa9.76□□□□□ -0.85
VNN3-205ENST00000417437 PRDM15P57071 1507 aaPredicted RBP9.76□□□□□ -0.85
VNN3-205ENST00000417437 KIF15Q9NS87 1388 aa9.75□□□□□ -0.85
VNN3-205ENST00000417437 ARHGAP31Q2M1Z3 1444 aa9.75□□□□□ -0.85
VNN3-205ENST00000417437 MYOM3Q5VTT5 1437 aa9.75□□□□□ -0.85
VNN3-205ENST00000417437 NKTRP30414 1462 aaKnown RBP9.75□□□□□ -0.85
VNN3-205ENST00000417437 NUTM2BA6NNL0 878 aaPredicted RBP9.75□□□□□ -0.85
VNN3-205ENST00000417437 NUTM2EB1AL46 878 aaPredicted RBP9.75□□□□□ -0.85
VNN3-205ENST00000417437 ATF3P18847 181 aa9.75□□□□□ -0.85
VNN3-205ENST00000417437 NUTM2AQ8IVF1 878 aaPredicted RBP9.75□□□□□ -0.85
VNN3-205ENST00000417437 SPATA31A6Q5VVP1 1343 aa9.75□□□□□ -0.85
VNN3-205ENST00000417437 MAP3K1Q13233 1512 aa9.74□□□□□ -0.85
VNN3-205ENST00000417437 KDM5AP29375 1690 aaKnown RBP9.74□□□□□ -0.85
VNN3-205ENST00000417437 CHGAP10645 457 aaKnown RBP9.73□□□□□ -0.85
VNN3-205ENST00000417437 ERBINQ96RT1 1412 aa9.73□□□□□ -0.85
VNN3-205ENST00000417437 CADPS2Q86UW7 1296 aa9.72□□□□□ -0.85
VNN3-205ENST00000417437 CHIC2Q9UKJ5 165 aa9.72□□□□□ -0.85
VNN3-205ENST00000417437 CHD2O14647 1828 aaKnown RBP9.72□□□□□ -0.85
VNN3-205ENST00000417437 TET3O43151 1660 aa9.71□□□□□ -0.85
VNN3-205ENST00000417437 SLC52A1Q9NWF4 448 aa9.71□□□□□ -0.86
VNN3-205ENST00000417437 FGD6Q6ZV73 1430 aa9.71□□□□□ -0.86
VNN3-205ENST00000417437 NWD1Q149M9 1564 aa9.71□□□□□ -0.86
VNN3-205ENST00000417437 COL16A1Q07092 1604 aaPredicted RBP9.71□□□□□ -0.86
VNN3-205ENST00000417437 NUTM2DQ5VT03 806 aaPredicted RBP9.7□□□□□ -0.86
VNN3-205ENST00000417437 ADGRB3O60242 1522 aa9.7□□□□□ -0.86
VNN3-205ENST00000417437 CROCC2H7BZ55 1655 aa9.7□□□□□ -0.86
VNN3-205ENST00000417437 MYO5BQ9ULV0 1848 aa9.7□□□□□ -0.86
VNN3-205ENST00000417437 LRP6O75581 1613 aa9.69□□□□□ -0.86
VNN3-205ENST00000417437 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.69□□□□□ -0.86
VNN3-205ENST00000417437 ANKRD30AQ9BXX3 1397 aa9.69□□□□□ -0.86
VNN3-205ENST00000417437 C19orf44Q9H6X5 657 aa9.69□□□□□ -0.86
VNN3-205ENST00000417437 SHPRHQ149N8 1683 aa9.68□□□□□ -0.86
VNN3-205ENST00000417437 AFF2P51816 1311 aa9.68□□□□□ -0.86
VNN3-205ENST00000417437 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.68□□□□□ -0.86
VNN3-205ENST00000417437 PTPN23Q9H3S7 1636 aa9.67□□□□□ -0.86
VNN3-205ENST00000417437 ABCC5O15440 1437 aa9.67□□□□□ -0.86
VNN3-205ENST00000417437 SETD5Q9C0A6 1442 aa9.67□□□□□ -0.86
VNN3-205ENST00000417437 RIMS2Q9UQ26 1411 aa9.67□□□□□ -0.86
VNN3-205ENST00000417437 PLEKHG1Q9ULL1 1385 aa9.67□□□□□ -0.86
VNN3-205ENST00000417437 ITGAEP38570 1179 aa9.67□□□□□ -0.86
VNN3-205ENST00000417437 C8orf37Q96NL8 207 aa9.67□□□□□ -0.86
VNN3-205ENST00000417437 TBX22Q9Y458 520 aa9.67□□□□□ -0.86
VNN3-205ENST00000417437 GCC2Q8IWJ2 1684 aa9.67□□□□□ -0.86
VNN3-205ENST00000417437 PPP4R3CPQ6ZMV5 832 aa9.66□□□□□ -0.86
VNN3-205ENST00000417437 QTRT2Q9H974 415 aaKnown RBP9.66□□□□□ -0.86
VNN3-205ENST00000417437 DAPK1P53355 1430 aa9.65□□□□□ -0.86
VNN3-205ENST00000417437 NCOA3Q9Y6Q9 1424 aa9.65□□□□□ -0.86
VNN3-205ENST00000417437 RAB3GAP2Q9H2M9 1393 aa9.65□□□□□ -0.86
VNN3-205ENST00000417437 AHDC1Q5TGY3 1603 aaPredicted RBP9.65□□□□□ -0.86
VNN3-205ENST00000417437 RBM6P78332 1123 aaKnown RBP9.65□□□□□ -0.86
VNN3-205ENST00000417437 NGLY1Q96IV0 654 aa9.65□□□□□ -0.86
VNN3-205ENST00000417437 LMTK2Q8IWU2 1503 aa9.65□□□□□ -0.86
VNN3-205ENST00000417437 CDK12Q9NYV4 1490 aaPredicted RBP9.65□□□□□ -0.87
VNN3-205ENST00000417437 NOS1P29475 1434 aa9.65□□□□□ -0.87
VNN3-205ENST00000417437 BRINP3Q76B58 766 aa9.64□□□□□ -0.87
VNN3-205ENST00000417437 LRRC59Q96AG4 307 aaKnown RBP9.64□□□□□ -0.87
VNN3-205ENST00000417437 ZRANB1Q9UGI0 708 aa9.64□□□□□ -0.87
VNN3-205ENST00000417437 TIMELESSQ9UNS1 1208 aa9.64□□□□□ -0.87
VNN3-205ENST00000417437 AMOTL2Q9Y2J4 779 aa9.63□□□□□ -0.87
VNN3-205ENST00000417437 RPRD2Q5VT52 1461 aaKnown RBP9.62□□□□□ -0.87
VNN3-205ENST00000417437 ADAMTS2O95450 1211 aa9.62□□□□□ -0.87
VNN3-205ENST00000417437 FAM50AQ14320 339 aaKnown RBP9.62□□□□□ -0.87
VNN3-205ENST00000417437 ZFYVE9O95405 1425 aa9.62□□□□□ -0.87
VNN3-205ENST00000417437 TMEM131LA2VDJ0 1609 aa9.61□□□□□ -0.87
VNN3-205ENST00000417437 DIP2AQ14689 1571 aa9.61□□□□□ -0.87
VNN3-205ENST00000417437 ATAD2Q6PL18 1390 aa9.61□□□□□ -0.87
VNN3-205ENST00000417437 PIK3R4Q99570 1358 aa9.61□□□□□ -0.87
VNN3-205ENST00000417437 TRPM2O94759 1503 aa9.61□□□□□ -0.87
VNN3-205ENST00000417437 RGS12O14924 1447 aa9.6□□□□□ -0.87
VNN3-205ENST00000417437 POTEHQ6S545 545 aa9.6□□□□□ -0.87
VNN3-205ENST00000417437 RNF216Q9NWF9 866 aaPredicted RBP9.6□□□□□ -0.87
VNN3-205ENST00000417437 ZNF326Q5BKZ1 582 aaKnown RBP9.59□□□□□ -0.87
VNN3-205ENST00000417437 USP21Q9UK80 565 aa9.59□□□□□ -0.87
VNN3-205ENST00000417437 ASXL1Q8IXJ9 1541 aa9.59□□□□□ -0.87
VNN3-205ENST00000417437 ANKRD50Q9ULJ7 1429 aa9.58□□□□□ -0.88
VNN3-205ENST00000417437 DDX17Q92841 729 aaKnown RBP9.58□□□□□ -0.88
VNN3-205ENST00000417437 DCCP43146 1447 aa9.57□□□□□ -0.88
VNN3-205ENST00000417437 ADAMTS13Q76LX8 1427 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms