RNA–Protein interactions for RNA: ENST00000417300.1

GABRE-202, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 2

Gene GABRE, Length 619 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-202ENST00000417300 UGGT1Q9NYU2 1555 aa17.2■□□□□ 0.34
GABRE-202ENST00000417300 KANK1Q14678 1352 aa17.2■□□□□ 0.34
GABRE-202ENST00000417300 KIF3BO15066 747 aa17.2■□□□□ 0.34
GABRE-202ENST00000417300 LMTK2Q8IWU2 1503 aa17.2■□□□□ 0.34
GABRE-202ENST00000417300 ROBO1Q9Y6N7 1651 aa17.2■□□□□ 0.34
GABRE-202ENST00000417300 RPRD2Q5VT52 1461 aaKnown RBP17.19■□□□□ 0.34
GABRE-202ENST00000417300 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.341e-15■■■□□ 18.6
GABRE-202ENST00000417300 CDK12Q9NYV4 1490 aaPredicted RBP17.18■□□□□ 0.34
GABRE-202ENST00000417300 E9PCH4 1651 aa17.17■□□□□ 0.34
GABRE-202ENST00000417300 NEUROD1Q13562 356 aa17.17■□□□□ 0.34
GABRE-202ENST00000417300 RBM33Q96EV2 1170 aaKnown RBP17.17■□□□□ 0.34
GABRE-202ENST00000417300 NLRP1Q9C000 1473 aa17.17■□□□□ 0.34
GABRE-202ENST00000417300 CEP152O94986 1710 aa17.16■□□□□ 0.34
GABRE-202ENST00000417300 TONSLQ96HA7 1378 aa17.15■□□□□ 0.34
GABRE-202ENST00000417300 ZC3H13Q5T200 1668 aaKnown RBP17.15■□□□□ 0.34
GABRE-202ENST00000417300 EFCAB6Q5THR3 1501 aa17.15■□□□□ 0.34
GABRE-202ENST00000417300 SPATA31A6Q5VVP1 1343 aa17.15■□□□□ 0.34
GABRE-202ENST00000417300 XIRP1Q702N8 1843 aaKnown RBP17.14■□□□□ 0.34
GABRE-202ENST00000417300 NUTM2BA6NNL0 878 aaPredicted RBP17.14■□□□□ 0.33
GABRE-202ENST00000417300 NUTM2EB1AL46 878 aaPredicted RBP17.14■□□□□ 0.33
GABRE-202ENST00000417300 NUTM2DQ5VT03 806 aaPredicted RBP17.14■□□□□ 0.33
GABRE-202ENST00000417300 NUTM2AQ8IVF1 878 aaPredicted RBP17.14■□□□□ 0.33
GABRE-202ENST00000417300 SETBP1Q9Y6X0 1596 aa17.13■□□□□ 0.33
GABRE-202ENST00000417300 ABCC3O15438 1527 aa17.12■□□□□ 0.33
GABRE-202ENST00000417300 LRP6O75581 1613 aa17.12■□□□□ 0.33
GABRE-202ENST00000417300 PHLPP1O60346 1717 aa17.12■□□□□ 0.33
GABRE-202ENST00000417300 SPHKAPQ2M3C7 1700 aa17.12■□□□□ 0.33
GABRE-202ENST00000417300 TRPM2O94759 1503 aa17.11■□□□□ 0.33
GABRE-202ENST00000417300 TMEM94Q12767 1356 aa17.1■□□□□ 0.33
GABRE-202ENST00000417300 CCDC144AA2RUR9 1427 aa17.08■□□□□ 0.32
GABRE-202ENST00000417300 WASHC2CQ9Y4E1 1318 aa17.07■□□□□ 0.32
GABRE-202ENST00000417300 PPP1R15AO75807 674 aaPredicted RBP17.07■□□□□ 0.32
GABRE-202ENST00000417300 SLAIN2Q9P270 581 aa17.07■□□□□ 0.32
GABRE-202ENST00000417300 PROSER2Q86WR7 435 aaPredicted RBP17.06■□□□□ 0.32
GABRE-202ENST00000417300 ARHGAP31Q2M1Z3 1444 aa17.04■□□□□ 0.32
GABRE-202ENST00000417300 TXNDC2Q86VQ3 553 aa17.04■□□□□ 0.32
GABRE-202ENST00000417300 RGS12O14924 1447 aa17.04■□□□□ 0.32
GABRE-202ENST00000417300 ATAD2Q6PL18 1390 aa17.03■□□□□ 0.32
GABRE-202ENST00000417300 AFF2P51816 1311 aa17.03■□□□□ 0.32
GABRE-202ENST00000417300 RBM6P78332 1123 aaKnown RBP17.03■□□□□ 0.32
GABRE-202ENST00000417300 SCAF11Q99590 1463 aaKnown RBP17.03■□□□□ 0.32
GABRE-202ENST00000417300 CLTCL1P53675 1640 aa17.03■□□□□ 0.32
GABRE-202ENST00000417300 IFFO2Q5TF58 517 aa17.02■□□□□ 0.32
GABRE-202ENST00000417300 L3MBTL2Q969R5 705 aa17.02■□□□□ 0.32
GABRE-202ENST00000417300 LTKP29376 864 aa17.01■□□□□ 0.31
GABRE-202ENST00000417300 QTRT2Q9H974 415 aaKnown RBP17.01■□□□□ 0.31
GABRE-202ENST00000417300 MSH6P52701 1360 aa17■□□□□ 0.31
GABRE-202ENST00000417300 COL16A1Q07092 1604 aaPredicted RBP16.99■□□□□ 0.31
GABRE-202ENST00000417300 KCNA6P17658 529 aa16.99■□□□□ 0.31
GABRE-202ENST00000417300 EID1Q9Y6B2 187 aa16.99■□□□□ 0.31
GABRE-202ENST00000417300 NOS1P29475 1434 aa16.98■□□□□ 0.31
GABRE-202ENST00000417300 SPATA31E1Q6ZUB1 1445 aa16.97■□□□□ 0.31
GABRE-202ENST00000417300 KIF1BO60333 1816 aa16.96■□□□□ 0.3
GABRE-202ENST00000417300 PIK3C2BO00750 1634 aa16.96■□□□□ 0.3
GABRE-202ENST00000417300 NGLY1Q96IV0 654 aa16.95■□□□□ 0.3
GABRE-202ENST00000417300 CCDC125Q86Z20 511 aa16.94■□□□□ 0.3
GABRE-202ENST00000417300 CFAP65Q6ZU64 1925 aaKnown RBP16.93■□□□□ 0.3
GABRE-202ENST00000417300 SHPRHQ149N8 1683 aa16.92■□□□□ 0.3
GABRE-202ENST00000417300 ADGRB3O60242 1522 aa16.91■□□□□ 0.3
GABRE-202ENST00000417300 ZNF316A6NFI3 1004 aaPredicted RBP16.91■□□□□ 0.3
GABRE-202ENST00000417300 ERVK-7P63135 1459 aa16.91■□□□□ 0.3
GABRE-202ENST00000417300 C8orf37Q96NL8 207 aa16.9■□□□□ 0.3
GABRE-202ENST00000417300 ARHGAP23Q9P227 1491 aa16.89■□□□□ 0.29
GABRE-202ENST00000417300 NBPF8Q3BBV2 869 aa16.89■□□□□ 0.29
GABRE-202ENST00000417300 RALGAPBQ86X10 1494 aa16.88■□□□□ 0.29
GABRE-202ENST00000417300 IFT172Q9UG01 1749 aa16.88■□□□□ 0.29
GABRE-202ENST00000417300 SLIT1O75093 1534 aa16.88■□□□□ 0.29
GABRE-202ENST00000417300 YY1P25490 414 aa16.88■□□□□ 0.29
GABRE-202ENST00000417300 UBR1Q8IWV7 1749 aa16.87■□□□□ 0.29
GABRE-202ENST00000417300 STAC3Q96MF2 364 aa16.87■□□□□ 0.29
GABRE-202ENST00000417300 SLC26A8Q96RN1 970 aa16.87■□□□□ 0.29
GABRE-202ENST00000417300 PRAG1Q86YV5 1406 aa16.87■□□□□ 0.29
GABRE-202ENST00000417300 LRP5O75197 1615 aa16.86■□□□□ 0.29
GABRE-202ENST00000417300 DCAF11Q8TEB1 546 aa16.86■□□□□ 0.29
GABRE-202ENST00000417300 EP400Q96L91 3159 aa16.85■□□□□ 0.29
GABRE-202ENST00000417300 TRPM1Q7Z4N2 1603 aa16.85■□□□□ 0.29
GABRE-202ENST00000417300 RGL3Q3MIN7 710 aa16.85■□□□□ 0.29
GABRE-202ENST00000417300 SLC52A1Q9NWF4 448 aa16.85■□□□□ 0.29
GABRE-202ENST00000417300 MYOM2P54296 1465 aa16.85■□□□□ 0.29
GABRE-202ENST00000417300 NKTRP30414 1462 aaKnown RBP16.84■□□□□ 0.29
GABRE-202ENST00000417300 AHDC1Q5TGY3 1603 aaPredicted RBP16.83■□□□□ 0.28
GABRE-202ENST00000417300 PPLO60437 1756 aa16.82■□□□□ 0.28
GABRE-202ENST00000417300 LAMC1P11047 1609 aa16.81■□□□□ 0.28
GABRE-202ENST00000417300 C14orf37Q86TY3 774 aa16.81■□□□□ 0.28
GABRE-202ENST00000417300 STAG3Q9UJ98 1225 aa16.81■□□□□ 0.28
GABRE-202ENST00000417300 TMEM131LA2VDJ0 1609 aa16.81■□□□□ 0.28
GABRE-202ENST00000417300 TMEM2Q9UHN6 1383 aa16.8■□□□□ 0.28
GABRE-202ENST00000417300 KIAA1210Q9ULL0 1709 aa16.8■□□□□ 0.28
GABRE-202ENST00000417300 KDM2AQ9Y2K7 1162 aa16.8■□□□□ 0.28
GABRE-202ENST00000417300 RPGRIP1LQ68CZ1 1315 aa16.79■□□□□ 0.28
GABRE-202ENST00000417300 NRXN1Q9ULB1 1477 aa16.79■□□□□ 0.28
GABRE-202ENST00000417300 GPRASP1Q5JY77 1395 aa16.78■□□□□ 0.28
GABRE-202ENST00000417300 NWD1Q149M9 1564 aa16.78■□□□□ 0.28
GABRE-202ENST00000417300 MYO5BQ9ULV0 1848 aa16.78■□□□□ 0.28
GABRE-202ENST00000417300 IDI1Q13907 227 aa16.78■□□□□ 0.28
GABRE-202ENST00000417300 ZNF326Q5BKZ1 582 aaKnown RBP16.78■□□□□ 0.28
GABRE-202ENST00000417300 CADPS2Q86UW7 1296 aa16.78■□□□□ 0.28
GABRE-202ENST00000417300 BCANQ96GW7 911 aa16.78■□□□□ 0.28
GABRE-202ENST00000417300 KDM5AP29375 1690 aaKnown RBP16.78■□□□□ 0.28
GABRE-202ENST00000417300 NEXMIFQ5QGS0 1516 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms