RNA–Protein interactions for RNA: ENST00000416162.6

MEST-206, mesoderm specific transcript, humanhuman

TSL 1 (best) BASIC

Gene MEST, Length 2,158 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEST-206ENST00000416162 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.1■□□□□ 0.49
MEST-206ENST00000416162 ZNF777Q9ULD5 760 aaPredicted RBP18.1■□□□□ 0.49
MEST-206ENST00000416162 A2ML1A8K2U0 1454 aa18.08■□□□□ 0.49
MEST-206ENST00000416162 LAS1LQ9Y4W2 734 aaKnown RBP18.08■□□□□ 0.49
MEST-206ENST00000416162 HNRNPMP52272 730 aaKnown RBP eCLIP18.08■□□□□ 0.48
MEST-206ENST00000416162 DNMT1P26358 1616 aaKnown RBP18.07■□□□□ 0.48
MEST-206ENST00000416162 FAM135AQ9P2D6 1515 aa18.07■□□□□ 0.48
MEST-206ENST00000416162 CPS1P31327 1500 aa18.05■□□□□ 0.48
MEST-206ENST00000416162 RRP1P56182 461 aaKnown RBP18.05■□□□□ 0.48
MEST-206ENST00000416162 CFDP1Q9UEE9 299 aaPredicted RBP18.05■□□□□ 0.48
MEST-206ENST00000416162 LRPPRCP42704 1394 aaKnown RBP18.05■□□□□ 0.48
MEST-206ENST00000416162 NPM2Q86SE8 214 aaKnown RBP18.04■□□□□ 0.48
MEST-206ENST00000416162 ANKRD30BQ9BXX2 1392 aa18.04■□□□□ 0.48
MEST-206ENST00000416162 PNISRQ8TF01 805 aaKnown RBP18.03■□□□□ 0.48
MEST-206ENST00000416162 MPHOSPH9Q99550 1183 aa18.03■□□□□ 0.48
MEST-206ENST00000416162 RSPH6AQ9H0K4 717 aa18.03■□□□□ 0.48
MEST-206ENST00000416162 BRPF3Q9ULD4 1205 aa18.03■□□□□ 0.48
MEST-206ENST00000416162 RTEL1-TNFRSF6BF6WH68 1400 aa18.02■□□□□ 0.48
MEST-206ENST00000416162 GGT6Q6P531 493 aa18.02■□□□□ 0.48
MEST-206ENST00000416162 KTN1Q86UP2 1357 aaKnown RBP18.02■□□□□ 0.48
MEST-206ENST00000416162 ROCK2O75116 1388 aaKnown RBP18.01■□□□□ 0.47
MEST-206ENST00000416162 NBPF8Q3BBV2 869 aa18.01■□□□□ 0.47
MEST-206ENST00000416162 NEURL4Q96JN8 1562 aa18■□□□□ 0.47
MEST-206ENST00000416162 MED1Q15648 1581 aaPredicted RBP18■□□□□ 0.47
MEST-206ENST00000416162 FAM43AQ8N2R8 423 aa17.98■□□□□ 0.47
MEST-206ENST00000416162 MBD5Q9P267 1494 aa17.98■□□□□ 0.47
MEST-206ENST00000416162 SHANK2Q9UPX8 1470 aa17.97■□□□□ 0.47
MEST-206ENST00000416162 NFKBIBQ15653 356 aa17.97■□□□□ 0.47
MEST-206ENST00000416162 BRD4O60885 1362 aaPredicted RBP17.97■□□□□ 0.47
MEST-206ENST00000416162 PZPP20742 1482 aa17.97■□□□□ 0.47
MEST-206ENST00000416162 KDM5DQ9BY66 1539 aa17.97■□□□□ 0.47
MEST-206ENST00000416162 EXOC6Q8TAG9 804 aa17.97■□□□□ 0.47
MEST-206ENST00000416162 TOM1O60784 492 aa17.96■□□□□ 0.47
MEST-206ENST00000416162 PDE3BQ13370 1112 aa17.96■□□□□ 0.47
MEST-206ENST00000416162 DEPDC5O75140 1603 aa17.96■□□□□ 0.47
MEST-206ENST00000416162 TNRQ92752 1358 aa17.96■□□□□ 0.47
MEST-206ENST00000416162 RRP7BPQ9NSQ0 103 aa17.96■□□□□ 0.46
MEST-206ENST00000416162 ROCK1Q13464 1354 aa17.95■□□□□ 0.46
MEST-206ENST00000416162 RCAN3Q9UKA8 241 aa17.94■□□□□ 0.46
MEST-206ENST00000416162 VWDEQ8N2E2 1590 aa17.93■□□□□ 0.46
MEST-206ENST00000416162 NLRP1Q9C000 1473 aa17.93■□□□□ 0.46
MEST-206ENST00000416162 FRAT1Q92837 279 aaPredicted RBP17.93■□□□□ 0.46
MEST-206ENST00000416162 PKNOX2Q96KN3 472 aa17.93■□□□□ 0.46
MEST-206ENST00000416162 HSPA1LP34931 641 aa17.92■□□□□ 0.46
MEST-206ENST00000416162 TMC1Q8TDI8 760 aa17.92■□□□□ 0.46
MEST-206ENST00000416162 MED14O60244 1454 aa17.92■□□□□ 0.46
MEST-206ENST00000416162 KIF15Q9NS87 1388 aa17.92■□□□□ 0.46
MEST-206ENST00000416162 INSRP06213 1382 aa17.91■□□□□ 0.46
MEST-206ENST00000416162 CCDC141Q6ZP82 1450 aa17.9■□□□□ 0.46
MEST-206ENST00000416162 ANKLE2Q86XL3 938 aa17.9■□□□□ 0.46
MEST-206ENST00000416162 USP47Q96K76 1375 aa17.89■□□□□ 0.46
MEST-206ENST00000416162 E9PCH4 1651 aa17.89■□□□□ 0.45
MEST-206ENST00000416162 IQGAP1P46940 1657 aa17.89■□□□□ 0.45
MEST-206ENST00000416162 RSPH4AQ5TD94 716 aa17.89■□□□□ 0.45
MEST-206ENST00000416162 THEMISQ8N1K5 641 aaPredicted RBP17.89■□□□□ 0.45
MEST-206ENST00000416162 ZNF644Q9H582 1327 aaPredicted RBP17.88■□□□□ 0.45
MEST-206ENST00000416162 UGGT1Q9NYU2 1555 aa17.88■□□□□ 0.45
MEST-206ENST00000416162 MYBBP1AQ9BQG0 1328 aaKnown RBP17.88■□□□□ 0.45
MEST-206ENST00000416162 ZC3H13Q5T200 1668 aaKnown RBP17.88■□□□□ 0.45
MEST-206ENST00000416162 PIP4K2BP78356 416 aa17.87■□□□□ 0.45
MEST-206ENST00000416162 SYNMO15061 1565 aa17.87■□□□□ 0.45
MEST-206ENST00000416162 NPHP4O75161 1426 aaPredicted RBP17.87■□□□□ 0.45
MEST-206ENST00000416162 ALKQ9UM73 1620 aa17.87■□□□□ 0.45
MEST-206ENST00000416162 KIF3BO15066 747 aa17.87■□□□□ 0.45
MEST-206ENST00000416162 RALBP1Q15311 655 aa17.87■□□□□ 0.45
MEST-206ENST00000416162 ARHGEF5Q12774 1597 aa17.86■□□□□ 0.45
MEST-206ENST00000416162 FBXO31Q5XUX0 539 aaPredicted RBP17.86■□□□□ 0.45
MEST-206ENST00000416162 RNF17Q9BXT8 1623 aaKnown RBP17.86■□□□□ 0.45
MEST-206ENST00000416162 CHIC2Q9UKJ5 165 aa17.85■□□□□ 0.45
MEST-206ENST00000416162 CAMSAP2Q08AD1 1489 aa17.85■□□□□ 0.45
MEST-206ENST00000416162 STRCP1A6NGW2 1772 aa17.84■□□□□ 0.45
MEST-206ENST00000416162 RALGAPBQ86X10 1494 aa17.83■□□□□ 0.44
MEST-206ENST00000416162 EIF2AK4Q9P2K8 1649 aaKnown RBP17.81■□□□□ 0.44
MEST-206ENST00000416162 DAPK1P53355 1430 aa17.81■□□□□ 0.44
MEST-206ENST00000416162 FOXD1Q16676 465 aa17.8■□□□□ 0.44
MEST-206ENST00000416162 PHF23Q9BUL5 403 aaPredicted RBP17.8■□□□□ 0.44
MEST-206ENST00000416162 MAST1Q9Y2H9 1570 aa17.8■□□□□ 0.44
MEST-206ENST00000416162 LRRC7Q96NW7 1537 aa17.79■□□□□ 0.44
MEST-206ENST00000416162 KDM2BQ8NHM5 1336 aa17.79■□□□□ 0.44
MEST-206ENST00000416162 ABCC3O15438 1527 aa17.78■□□□□ 0.44
MEST-206ENST00000416162 GLIPR1L2Q4G1C9 344 aa17.78■□□□□ 0.44
MEST-206ENST00000416162 UBR1Q8IWV7 1749 aa17.77■□□□□ 0.44
MEST-206ENST00000416162 FAM161AQ3B820 660 aa17.77■□□□□ 0.43
MEST-206ENST00000416162 VIRMAQ69YN4 1812 aaKnown RBP17.77■□□□□ 0.43
MEST-206ENST00000416162 CENPQQ7L2Z9 268 aaPredicted RBP17.76■□□□□ 0.43
MEST-206ENST00000416162 ERVK-7P63135 1459 aa17.76■□□□□ 0.43
MEST-206ENST00000416162 NLRP13Q86W25 1043 aa17.75■□□□□ 0.43
MEST-206ENST00000416162 SLC4A1APQ9BWU0 796 aaKnown RBP17.75■□□□□ 0.43
MEST-206ENST00000416162 BLMP54132 1417 aaPredicted RBP17.75■□□□□ 0.43
MEST-206ENST00000416162 TSPY4P0CV99 314 aa17.74■□□□□ 0.43
MEST-206ENST00000416162 TSPY10P0CW01 314 aa17.74■□□□□ 0.43
MEST-206ENST00000416162 CFAP65Q6ZU64 1925 aaKnown RBP17.74■□□□□ 0.43
MEST-206ENST00000416162 PARD3Q8TEW0 1356 aa17.74■□□□□ 0.43
MEST-206ENST00000416162 CEP152O94986 1710 aa17.74■□□□□ 0.43
MEST-206ENST00000416162 ABCC5O15440 1437 aa17.73■□□□□ 0.43
MEST-206ENST00000416162 DCAF11Q8TEB1 546 aa17.73■□□□□ 0.43
MEST-206ENST00000416162 XIRP1Q702N8 1843 aaKnown RBP17.73■□□□□ 0.43
MEST-206ENST00000416162 FRAT2O75474 233 aaPredicted RBP17.73■□□□□ 0.43
MEST-206ENST00000416162 MROH1Q8NDA8 1641 aa17.73■□□□□ 0.43
MEST-206ENST00000416162 CRBNQ96SW2 442 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms