RNA–Protein interactions for RNA: ENST00000416002.1

AF240627.1-201, humanhuman

TSL 3 BASIC

Gene AF240627.1, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF240627.1-201ENST00000416002 PCDHB3Q9Y5E6 796 aa11.44□□□□□ -0.58
AF240627.1-201ENST00000416002 RCCD1A6NED2 376 aa11.43□□□□□ -0.58
AF240627.1-201ENST00000416002 ZPR1O75312 459 aa11.43□□□□□ -0.58
AF240627.1-201ENST00000416002 FAM161AQ3B820 660 aa11.43□□□□□ -0.58
AF240627.1-201ENST00000416002 SMYD5Q6GMV2 418 aa11.42□□□□□ -0.58
AF240627.1-201ENST00000416002 V9GY48 417 aaPredicted RBP11.42□□□□□ -0.58
AF240627.1-201ENST00000416002 GFRA3O60609 400 aa11.41□□□□□ -0.58
AF240627.1-201ENST00000416002 KMT5BQ4FZB7 885 aa11.4□□□□□ -0.58
AF240627.1-201ENST00000416002 TMUB1Q9BVT8 246 aa11.4□□□□□ -0.58
AF240627.1-201ENST00000416002 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.39□□□□□ -0.59
AF240627.1-201ENST00000416002 OATP04181 439 aa11.39□□□□□ -0.59
AF240627.1-201ENST00000416002 TESPA1A2RU30 521 aaPredicted RBP11.38□□□□□ -0.59
AF240627.1-201ENST00000416002 HIC1Q14526 733 aa11.38□□□□□ -0.59
AF240627.1-201ENST00000416002 BLOC1S3Q6QNY0 202 aa11.38□□□□□ -0.59
AF240627.1-201ENST00000416002 ACTN4O43707 911 aaKnown RBP11.36□□□□□ -0.59
AF240627.1-201ENST00000416002 CFHP08603 1231 aa11.35□□□□□ -0.59
AF240627.1-201ENST00000416002 RBM26Q5T8P6 1007 aaKnown RBP11.35□□□□□ -0.59
AF240627.1-201ENST00000416002 PXYLP1Q8TE99 480 aa11.35□□□□□ -0.59
AF240627.1-201ENST00000416002 NRG2O14511 850 aaPredicted RBP11.33□□□□□ -0.6
AF240627.1-201ENST00000416002 SLC10A3P09131 477 aa11.32□□□□□ -0.6
AF240627.1-201ENST00000416002 RSPH4AQ5TD94 716 aa11.32□□□□□ -0.6
AF240627.1-201ENST00000416002 GNPATO15228 680 aa11.31□□□□□ -0.6
AF240627.1-201ENST00000416002 METTL3Q86U44 580 aaKnown RBP11.31□□□□□ -0.6
AF240627.1-201ENST00000416002 TRAF7Q6Q0C0 670 aa11.3□□□□□ -0.6
AF240627.1-201ENST00000416002 RNF223E7ERA6 249 aa11.29□□□□□ -0.6
AF240627.1-201ENST00000416002 HAP1P54257 671 aaPredicted RBP11.29□□□□□ -0.6
AF240627.1-201ENST00000416002 TLL1O43897 1013 aa11.28□□□□□ -0.6
AF240627.1-201ENST00000416002 NR1I2O75469 434 aa11.28□□□□□ -0.6
AF240627.1-201ENST00000416002 PDZRN3Q9UPQ7 1066 aa11.28□□□□□ -0.6
AF240627.1-201ENST00000416002 FECHP22830 423 aa11.27□□□□□ -0.61
AF240627.1-201ENST00000416002 SLC19A1P41440 591 aa11.26□□□□□ -0.61
AF240627.1-201ENST00000416002 DAXXQ9UER7 740 aaPredicted RBP11.25□□□□□ -0.61
AF240627.1-201ENST00000416002 S1PR4O95977 384 aa11.24□□□□□ -0.61
AF240627.1-201ENST00000416002 ADH1BP00325 375 aa11.24□□□□□ -0.61
AF240627.1-201ENST00000416002 ANKLE1Q8NAG6 615 aa11.24□□□□□ -0.61
AF240627.1-201ENST00000416002 LCE2BO14633 110 aa11.23□□□□□ -0.61
AF240627.1-201ENST00000416002 PPEF1O14829 653 aaPredicted RBP11.23□□□□□ -0.61
AF240627.1-201ENST00000416002 SCUBE3Q8IX30 993 aa11.23□□□□□ -0.61
AF240627.1-201ENST00000416002 GPR37O15354 613 aa11.22□□□□□ -0.61
AF240627.1-201ENST00000416002 PUS10Q3MIT2 529 aaKnown RBP11.21□□□□□ -0.61
AF240627.1-201ENST00000416002 RDH13Q8NBN7 331 aa11.21□□□□□ -0.61
AF240627.1-201ENST00000416002 SLC6A16Q9GZN6 736 aa11.21□□□□□ -0.61
AF240627.1-201ENST00000416002 SPRYD7Q5W111 196 aa11.2□□□□□ -0.62
AF240627.1-201ENST00000416002 GPIHBP1Q8IV16 184 aa11.2□□□□□ -0.62
AF240627.1-201ENST00000416002 EMID1Q96A84 441 aaPredicted RBP11.19□□□□□ -0.62
AF240627.1-201ENST00000416002 KDM2AQ9Y2K7 1162 aa11.19□□□□□ -0.62
AF240627.1-201ENST00000416002 DDX11L8A8MPP1 907 aa11.18□□□□□ -0.62
AF240627.1-201ENST00000416002 ZNF598Q86UK7 904 aaKnown RBP11.18□□□□□ -0.62
AF240627.1-201ENST00000416002 SULF1Q8IWU6 871 aa11.17□□□□□ -0.62
AF240627.1-201ENST00000416002 SPSB2Q99619 263 aa11.17□□□□□ -0.62
AF240627.1-201ENST00000416002 LIAT1Q6ZQX7 453 aa11.16□□□□□ -0.62
AF240627.1-201ENST00000416002 NLRP7Q8WX94 980 aa11.16□□□□□ -0.62
AF240627.1-201ENST00000416002 ATP6V1AP38606 617 aa11.14□□□□□ -0.63
AF240627.1-201ENST00000416002 FUT2Q10981 343 aa11.14□□□□□ -0.63
AF240627.1-201ENST00000416002 MORN1Q5T089 497 aa11.14□□□□□ -0.63
AF240627.1-201ENST00000416002 TRIM67Q6ZTA4 783 aa11.14□□□□□ -0.63
AF240627.1-201ENST00000416002 PHOX2BQ99453 314 aa11.14□□□□□ -0.63
AF240627.1-201ENST00000416002 ZNF697Q5TEC3 545 aa11.13□□□□□ -0.63
AF240627.1-201ENST00000416002 TULP1O00294 542 aaPredicted RBP11.12□□□□□ -0.63
AF240627.1-201ENST00000416002 GCGRP47871 477 aa11.12□□□□□ -0.63
AF240627.1-201ENST00000416002 PRR20EP86478 221 aa11.11□□□□□ -0.63
AF240627.1-201ENST00000416002 PRR20CP86479 221 aa11.11□□□□□ -0.63
AF240627.1-201ENST00000416002 PRR20DP86480 221 aa11.11□□□□□ -0.63
AF240627.1-201ENST00000416002 PRR20BP86481 221 aa11.11□□□□□ -0.63
AF240627.1-201ENST00000416002 PRR20AP86496 221 aa11.11□□□□□ -0.63
AF240627.1-201ENST00000416002 FMNL1O95466 1100 aaPredicted RBP11.1□□□□□ -0.63
AF240627.1-201ENST00000416002 PKDCCQ504Y2 493 aa11.1□□□□□ -0.63
AF240627.1-201ENST00000416002 PLA2G2CQ5R387 149 aa11.1□□□□□ -0.63
AF240627.1-201ENST00000416002 VSIG10Q8N0Z9 540 aa11.09□□□□□ -0.63
AF240627.1-201ENST00000416002 SLC27A5Q9Y2P5 690 aa11.09□□□□□ -0.63
AF240627.1-201ENST00000416002 DGAT1O75907 488 aa11.08□□□□□ -0.64
AF240627.1-201ENST00000416002 GRIPAP1Q4V328 841 aa11.08□□□□□ -0.64
AF240627.1-201ENST00000416002 ZNF787Q6DD87 383 aa11.08□□□□□ -0.64
AF240627.1-201ENST00000416002 THAP11Q96EK4 314 aa11.08□□□□□ -0.64
AF240627.1-201ENST00000416002 SALL2Q9Y467 1007 aaPredicted RBP11.07□□□□□ -0.64
AF240627.1-201ENST00000416002 GDF9O60383 454 aa11.06□□□□□ -0.64
AF240627.1-201ENST00000416002 MAP2K5Q13163 448 aa11.06□□□□□ -0.64
AF240627.1-201ENST00000416002 TNFRSF10AO00220 468 aa11.05□□□□□ -0.64
AF240627.1-201ENST00000416002 RPIAP49247 311 aa11.04□□□□□ -0.64
AF240627.1-201ENST00000416002 FAM160A2Q8N612 972 aaPredicted RBP11.04□□□□□ -0.64
AF240627.1-201ENST00000416002 IRF6O14896 467 aa11.03□□□□□ -0.64
AF240627.1-201ENST00000416002 MYT1Q01538 1121 aa11.03□□□□□ -0.64
AF240627.1-201ENST00000416002 BRICD5Q6PL45 260 aa11.03□□□□□ -0.64
AF240627.1-201ENST00000416002 FCF1Q9Y324 198 aaKnown RBP11.03□□□□□ -0.64
AF240627.1-201ENST00000416002 FAM187AA6NFU0 413 aa11.02□□□□□ -0.65
AF240627.1-201ENST00000416002 CD2BP2O95400 341 aaKnown RBP11.02□□□□□ -0.65
AF240627.1-201ENST00000416002 MINK1Q8N4C8 1332 aaPredicted RBP11.01□□□□□ -0.65
AF240627.1-201ENST00000416002 CD46P15529 392 aa11□□□□□ -0.65
AF240627.1-201ENST00000416002 FOXC1Q12948 553 aa11□□□□□ -0.65
AF240627.1-201ENST00000416002 LMOD2Q6P5Q4 547 aa11□□□□□ -0.65
AF240627.1-201ENST00000416002 Q3C1V9 767 aa10.99□□□□□ -0.65
AF240627.1-201ENST00000416002 MSS51Q4VC12 460 aa10.99□□□□□ -0.65
AF240627.1-201ENST00000416002 RNF19BQ6ZMZ0 732 aa10.98□□□□□ -0.65
AF240627.1-201ENST00000416002 PRDM9Q9NQV7 894 aa10.98□□□□□ -0.65
AF240627.1-201ENST00000416002 PKD2L1Q9P0L9 805 aa10.98□□□□□ -0.65
AF240627.1-201ENST00000416002 ZBTB24O43167 697 aaPredicted RBP10.97□□□□□ -0.65
AF240627.1-201ENST00000416002 KDM4AO75164 1064 aa10.97□□□□□ -0.65
AF240627.1-201ENST00000416002 MDM2Q00987 491 aaPredicted RBP10.97□□□□□ -0.65
AF240627.1-201ENST00000416002 USP46P62068 366 aa10.93□□□□□ -0.66
AF240627.1-201ENST00000416002 CCDC102AQ96A19 550 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms