RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 AXIN2Q9Y2T1 843 aa10.94□□□□□ -0.66
EPHA4-204ENST00000415749 LAMC3Q9Y6N6 1575 aa10.94□□□□□ -0.66
EPHA4-204ENST00000415749 BAZ1BQ9UIG0 1483 aaKnown RBP10.93□□□□□ -0.66
EPHA4-204ENST00000415749 POTEEQ6S8J3 1075 aa10.93□□□□□ -0.66
EPHA4-204ENST00000415749 KIAA1468Q9P260 1216 aa10.93□□□□□ -0.66
EPHA4-204ENST00000415749 DNAJB2P25686 324 aa10.92□□□□□ -0.66
EPHA4-204ENST00000415749 LCE2DQ5TA82 110 aaPredicted RBP10.92□□□□□ -0.66
EPHA4-204ENST00000415749 DMRTA1Q5VZB9 504 aa10.92□□□□□ -0.66
EPHA4-204ENST00000415749 TMUB1Q9BVT8 246 aa10.92□□□□□ -0.66
EPHA4-204ENST00000415749 SMARCA4P51532 1647 aa10.91□□□□□ -0.66
EPHA4-204ENST00000415749 RCCD1A6NED2 376 aa10.91□□□□□ -0.66
EPHA4-204ENST00000415749 IL27Q8NEV9 243 aa10.9□□□□□ -0.66
EPHA4-204ENST00000415749 KIF21AQ7Z4S6 1674 aa10.89□□□□□ -0.67
EPHA4-204ENST00000415749 TK2O00142 265 aa10.89□□□□□ -0.67
EPHA4-204ENST00000415749 REPIN1Q9BWE0 567 aaKnown RBP10.89□□□□□ -0.67
EPHA4-204ENST00000415749 NBPF3Q9H094 633 aa10.89□□□□□ -0.67
EPHA4-204ENST00000415749 VPS9D1Q9Y2B5 631 aa10.89□□□□□ -0.67
EPHA4-204ENST00000415749 POTEB3A0JP26 581 aa10.88□□□□□ -0.67
EPHA4-204ENST00000415749 SSTR3P32745 418 aaPredicted RBP10.88□□□□□ -0.67
EPHA4-204ENST00000415749 POTEBQ6S5H4 581 aa10.88□□□□□ -0.67
EPHA4-204ENST00000415749 NLRP7Q8WX94 980 aa10.88□□□□□ -0.67
EPHA4-204ENST00000415749 FAM117AQ9C073 453 aa10.88□□□□□ -0.67
EPHA4-204ENST00000415749 SUPT5HO00267 1087 aaKnown RBP10.87□□□□□ -0.67
EPHA4-204ENST00000415749 SULF1Q8IWU6 871 aa10.87□□□□□ -0.67
EPHA4-204ENST00000415749 FAM217BQ9NTX9 383 aaPredicted RBP10.87□□□□□ -0.67
EPHA4-204ENST00000415749 C3orf80F5H4A9 247 aa10.86□□□□□ -0.67
EPHA4-204ENST00000415749 SMAPO00193 183 aa10.86□□□□□ -0.67
EPHA4-204ENST00000415749 MS4A1P11836 297 aa10.86□□□□□ -0.67
EPHA4-204ENST00000415749 HDGFP51858 240 aaKnown RBP10.86□□□□□ -0.67
EPHA4-204ENST00000415749 TMEM134Q9H6X4 195 aa10.86□□□□□ -0.67
EPHA4-204ENST00000415749 CADPSQ9ULU8 1353 aa10.86□□□□□ -0.67
EPHA4-204ENST00000415749 SLC4A3P48751 1232 aa10.85□□□□□ -0.67
EPHA4-204ENST00000415749 LSM11P83369 360 aaKnown RBP eCLIP10.85□□□□□ -0.67
EPHA4-204ENST00000415749 MRC2Q9UBG0 1479 aa10.85□□□□□ -0.67
EPHA4-204ENST00000415749 FAM98CQ17RN3 349 aaKnown RBP10.84□□□□□ -0.67
EPHA4-204ENST00000415749 LAPTM4BQ86VI4 370 aa10.84□□□□□ -0.67
EPHA4-204ENST00000415749 RSPH4AQ5TD94 716 aa10.83□□□□□ -0.68
EPHA4-204ENST00000415749 SEPT9Q9UHD8 586 aaPredicted RBP10.83□□□□□ -0.68
EPHA4-204ENST00000415749 BAZ1AQ9NRL2 1556 aaPredicted RBP10.82□□□□□ -0.68
EPHA4-204ENST00000415749 ADGRD1Q6QNK2 874 aa10.82□□□□□ -0.68
EPHA4-204ENST00000415749 BEGAINQ9BUH8 593 aa10.82□□□□□ -0.68
EPHA4-204ENST00000415749 PLEKHG3A1L390 1219 aa10.81□□□□□ -0.68
EPHA4-204ENST00000415749 MRPL50Q8N5N7 158 aaKnown RBP10.81□□□□□ -0.68
EPHA4-204ENST00000415749 STAC3Q96MF2 364 aa10.81□□□□□ -0.68
EPHA4-204ENST00000415749 RSPH6AQ9H0K4 717 aa10.8□□□□□ -0.68
EPHA4-204ENST00000415749 WDR62O43379 1518 aa10.79□□□□□ -0.68
EPHA4-204ENST00000415749 PEG3Q9GZU2 1588 aa10.79□□□□□ -0.68
EPHA4-204ENST00000415749 DDX11L8A8MPP1 907 aa10.79□□□□□ -0.68
EPHA4-204ENST00000415749 BHMG1C9JSJ3 638 aaPredicted RBP10.79□□□□□ -0.68
EPHA4-204ENST00000415749 DIXDC1Q155Q3 683 aa10.79□□□□□ -0.68
EPHA4-204ENST00000415749 GOPCQ9HD26 462 aa10.79□□□□□ -0.68
EPHA4-204ENST00000415749 ANKRD13DQ6ZTN6 518 aa10.78□□□□□ -0.68
EPHA4-204ENST00000415749 CD46P15529 392 aa10.77□□□□□ -0.69
EPHA4-204ENST00000415749 SWT1Q5T5J6 900 aaKnown RBP10.77□□□□□ -0.69
EPHA4-204ENST00000415749 SLF2Q8IX21 1173 aa10.77□□□□□ -0.69
EPHA4-204ENST00000415749 RDH13Q8NBN7 331 aa10.77□□□□□ -0.69
EPHA4-204ENST00000415749 CYB5RLQ6IPT4 315 aa10.76□□□□□ -0.69
EPHA4-204ENST00000415749 SH3D19Q5HYK7 790 aa10.75□□□□□ -0.69
EPHA4-204ENST00000415749 ZFRQ96KR1 1074 aaKnown RBP10.75□□□□□ -0.69
EPHA4-204ENST00000415749 GOLGA8CPA6NN73 597 aa10.74□□□□□ -0.69
EPHA4-204ENST00000415749 HRO43593 1189 aa10.74□□□□□ -0.69
EPHA4-204ENST00000415749 NUTM1Q86Y26 1132 aa10.74□□□□□ -0.69
EPHA4-204ENST00000415749 NECTIN2Q92692 538 aa10.74□□□□□ -0.69
EPHA4-204ENST00000415749 PCMTD1Q96MG8 357 aaPredicted RBP10.74□□□□□ -0.69
EPHA4-204ENST00000415749 MROH2BQ7Z745 1585 aa10.73□□□□□ -0.69
EPHA4-204ENST00000415749 SAMD7Q7Z3H4 446 aa10.73□□□□□ -0.69
EPHA4-204ENST00000415749 CEP164Q9UPV0 1460 aa10.73□□□□□ -0.69
EPHA4-204ENST00000415749 LRCH3Q96II8 777 aa10.72□□□□□ -0.69
EPHA4-204ENST00000415749 RIMBP3CA6NJZ7 1639 aa10.72□□□□□ -0.69
EPHA4-204ENST00000415749 RIMBP3BA6NNM3 1639 aa10.72□□□□□ -0.69
EPHA4-204ENST00000415749 RIMBP3Q9UFD9 1639 aa10.72□□□□□ -0.69
EPHA4-204ENST00000415749 SKIV2LQ15477 1246 aaKnown RBP10.71□□□□□ -0.69
EPHA4-204ENST00000415749 ANKK1Q8NFD2 765 aa10.71□□□□□ -0.69
EPHA4-204ENST00000415749 TBC1D2Q9BYX2 928 aa10.71□□□□□ -0.69
EPHA4-204ENST00000415749 RNF40O75150 1001 aa10.7□□□□□ -0.7
EPHA4-204ENST00000415749 FANCD2Q9BXW9 1451 aa10.69□□□□□ -0.7
EPHA4-204ENST00000415749 POTEGQ6S5H5 508 aa10.69□□□□□ -0.7
EPHA4-204ENST00000415749 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.69□□□□□ -0.7
EPHA4-204ENST00000415749 PODXL2Q9NZ53 605 aa10.69□□□□□ -0.7
EPHA4-204ENST00000415749 ATP1B4Q9UN42 357 aaPredicted RBP10.69□□□□□ -0.7
EPHA4-204ENST00000415749 GCGRP47871 477 aa10.68□□□□□ -0.7
EPHA4-204ENST00000415749 USP46P62068 366 aa10.68□□□□□ -0.7
EPHA4-204ENST00000415749 MYSM1Q5VVJ2 828 aa10.68□□□□□ -0.7
EPHA4-204ENST00000415749 SPIRE2Q8WWL2 714 aa10.68□□□□□ -0.7
EPHA4-204ENST00000415749 KRTAP3-3Q9BYR6 98 aa10.68□□□□□ -0.7
EPHA4-204ENST00000415749 KRTAP3-2Q9BYR7 98 aa10.68□□□□□ -0.7
EPHA4-204ENST00000415749 POTEMA6NI47 508 aa10.67□□□□□ -0.7
EPHA4-204ENST00000415749 KDM4AO75164 1064 aa10.67□□□□□ -0.7
EPHA4-204ENST00000415749 SLC10A3P09131 477 aa10.67□□□□□ -0.7
EPHA4-204ENST00000415749 CLK2P49760 499 aaKnown RBP10.66□□□□□ -0.7
EPHA4-204ENST00000415749 ARHGEF11O15085 1522 aa10.66□□□□□ -0.7
EPHA4-204ENST00000415749 KMT5BQ4FZB7 885 aa10.65□□□□□ -0.7
EPHA4-204ENST00000415749 CDAN1Q8IWY9 1227 aa10.65□□□□□ -0.7
EPHA4-204ENST00000415749 POLR3EQ9NVU0 708 aa10.65□□□□□ -0.7
EPHA4-204ENST00000415749 CFHP08603 1231 aa10.64□□□□□ -0.71
EPHA4-204ENST00000415749 GRIPAP1Q4V328 841 aa10.64□□□□□ -0.71
EPHA4-204ENST00000415749 WNT2BQ93097 391 aa10.64□□□□□ -0.71
EPHA4-204ENST00000415749 PRR14Q9BWN1 585 aa10.64□□□□□ -0.71
EPHA4-204ENST00000415749 SOWAHBA6NEL2 793 aa10.63□□□□□ -0.71
EPHA4-204ENST00000415749 GJA5P36382 358 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms