RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 FAM161AQ3B820 660 aa9.98□□□□□ -0.81
SIK3-203ENST00000415541 ARXQ96QS3 562 aa9.98□□□□□ -0.81
SIK3-203ENST00000415541 PLCH2O75038 1416 aa9.98□□□□□ -0.81
SIK3-203ENST00000415541 DNMT1P26358 1616 aaKnown RBP9.98□□□□□ -0.81
SIK3-203ENST00000415541 TRAPPC8Q9Y2L5 1435 aa9.98□□□□□ -0.81
SIK3-203ENST00000415541 MRE11P49959 708 aa9.97□□□□□ -0.81
SIK3-203ENST00000415541 SMAP1Q8IYB5 467 aaPredicted RBP9.97□□□□□ -0.81
SIK3-203ENST00000415541 BBXQ8WY36 941 aaPredicted RBP9.97□□□□□ -0.81
SIK3-203ENST00000415541 PANK3Q9H999 370 aa9.97□□□□□ -0.81
SIK3-203ENST00000415541 CCDC7Q96M83 1385 aa9.97□□□□□ -0.81
SIK3-203ENST00000415541 SYCP2Q9BX26 1530 aa9.97□□□□□ -0.81
SIK3-203ENST00000415541 NEUROD2Q15784 382 aa9.96□□□□□ -0.81
SIK3-203ENST00000415541 RPRD2Q5VT52 1461 aaKnown RBP9.96□□□□□ -0.81
SIK3-203ENST00000415541 ABCC2Q92887 1545 aa9.96□□□□□ -0.81
SIK3-203ENST00000415541 RCAN3Q9UKA8 241 aa9.96□□□□□ -0.82
SIK3-203ENST00000415541 XRCC6P12956 609 aaKnown RBP eCLIP9.95□□□□□ -0.823e-6■■□□□ 14.4
SIK3-203ENST00000415541 SPATA31E1Q6ZUB1 1445 aa9.95□□□□□ -0.82
SIK3-203ENST00000415541 CHD1O14646 1710 aa9.95□□□□□ -0.82
SIK3-203ENST00000415541 C14orf37Q86TY3 774 aa9.95□□□□□ -0.82
SIK3-203ENST00000415541 ISY1Q9ULR0 285 aaKnown RBP9.95□□□□□ -0.82
SIK3-203ENST00000415541 POLR1AO95602 1720 aaPredicted RBP9.94□□□□□ -0.82
SIK3-203ENST00000415541 NUTM2FA1L443 756 aa9.94□□□□□ -0.82
SIK3-203ENST00000415541 VGFO15240 615 aaPredicted RBP9.94□□□□□ -0.82
SIK3-203ENST00000415541 WDR7Q9Y4E6 1490 aa9.94□□□□□ -0.82
SIK3-203ENST00000415541 ANP32BQ92688 251 aaKnown RBP9.93□□□□□ -0.82
SIK3-203ENST00000415541 KIAA1211Q6ZU35 1233 aa9.93□□□□□ -0.82
SIK3-203ENST00000415541 NAP1L2Q9ULW6 460 aaPredicted RBP9.93□□□□□ -0.82
SIK3-203ENST00000415541 KTN1Q86UP2 1357 aaKnown RBP9.92□□□□□ -0.82
SIK3-203ENST00000415541 ABCA8O94911 1581 aa9.92□□□□□ -0.82
SIK3-203ENST00000415541 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.92□□□□□ -0.82
SIK3-203ENST00000415541 PZPP20742 1482 aa9.92□□□□□ -0.82
SIK3-203ENST00000415541 SOX12O15370 315 aa9.92□□□□□ -0.82
SIK3-203ENST00000415541 TERF1P54274 439 aa9.92□□□□□ -0.82
SIK3-203ENST00000415541 HDGFP51858 240 aaKnown RBP9.91□□□□□ -0.82
SIK3-203ENST00000415541 MORC1Q86VD1 984 aa9.91□□□□□ -0.82
SIK3-203ENST00000415541 MBD5Q9P267 1494 aa9.91□□□□□ -0.82
SIK3-203ENST00000415541 PDE3BQ13370 1112 aa9.91□□□□□ -0.82
SIK3-203ENST00000415541 MINK1Q8N4C8 1332 aaPredicted RBP9.91□□□□□ -0.82
SIK3-203ENST00000415541 ZBTB7CA1YPR0 619 aa9.9□□□□□ -0.82
SIK3-203ENST00000415541 FBXO31Q5XUX0 539 aaPredicted RBP9.9□□□□□ -0.82
SIK3-203ENST00000415541 ITSN2Q9NZM3 1697 aa9.9□□□□□ -0.82
SIK3-203ENST00000415541 CENPQQ7L2Z9 268 aaPredicted RBP9.9□□□□□ -0.82
SIK3-203ENST00000415541 FSD2A1L4K1 749 aa9.89□□□□□ -0.83
SIK3-203ENST00000415541 ABCC10Q5T3U5 1492 aa9.89□□□□□ -0.83
SIK3-203ENST00000415541 EIF3AQ14152 1382 aaKnown RBP9.89□□□□□ -0.83
SIK3-203ENST00000415541 U2SURPO15042 1029 aaKnown RBP9.89□□□□□ -0.83
SIK3-203ENST00000415541 RALBP1Q15311 655 aa9.89□□□□□ -0.83
SIK3-203ENST00000415541 FAM13BQ9NYF5 915 aa9.89□□□□□ -0.83
SIK3-203ENST00000415541 DHX29Q7Z478 1369 aaKnown RBP9.89□□□□□ -0.83
SIK3-203ENST00000415541 MSNP26038 577 aaKnown RBP9.89□□□□□ -0.83
SIK3-203ENST00000415541 CROCC2H7BZ55 1655 aa9.89□□□□□ -0.83
SIK3-203ENST00000415541 BCORL1Q5H9F3 1711 aa9.88□□□□□ -0.83
SIK3-203ENST00000415541 UTP14CQ5TAP6 766 aaKnown RBP9.88□□□□□ -0.83
SIK3-203ENST00000415541 ADGBQ8N7X0 1667 aa9.88□□□□□ -0.83
SIK3-203ENST00000415541 CFAP53Q96M91 514 aa9.88□□□□□ -0.83
SIK3-203ENST00000415541 UPF2Q9HAU5 1272 aaKnown RBP9.88□□□□□ -0.83
SIK3-203ENST00000415541 IPO4Q8TEX9 1081 aaKnown RBP9.88□□□□□ -0.83
SIK3-203ENST00000415541 NLRP13Q86W25 1043 aa9.87□□□□□ -0.83
SIK3-203ENST00000415541 GZF1Q9H116 711 aaPredicted RBP9.87□□□□□ -0.83
SIK3-203ENST00000415541 SLKQ9H2G2 1235 aaPredicted RBP9.87□□□□□ -0.83
SIK3-203ENST00000415541 ADCY10Q96PN6 1610 aa9.87□□□□□ -0.83
SIK3-203ENST00000415541 GRPEL1Q9HAV7 217 aa9.87□□□□□ -0.83
SIK3-203ENST00000415541 IDI1Q13907 227 aa9.87□□□□□ -0.83
SIK3-203ENST00000415541 LMOD2Q6P5Q4 547 aa9.87□□□□□ -0.83
SIK3-203ENST00000415541 PANK2Q9BZ23 570 aa9.87□□□□□ -0.83
SIK3-203ENST00000415541 ADGRF5Q8IZF2 1346 aa9.86□□□□□ -0.83
SIK3-203ENST00000415541 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.86□□□□□ -0.83
SIK3-203ENST00000415541 ERBINQ96RT1 1412 aa9.86□□□□□ -0.83
SIK3-203ENST00000415541 ZHX1Q9UKY1 873 aaPredicted RBP9.86□□□□□ -0.83
SIK3-203ENST00000415541 ADGRL2O95490 1459 aa9.85□□□□□ -0.83
SIK3-203ENST00000415541 CDK11BP21127 795 aaKnown RBP9.85□□□□□ -0.83
SIK3-203ENST00000415541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.85□□□□□ -0.838e-7■■■□□ 14.8
SIK3-203ENST00000415541 EID1Q9Y6B2 187 aa9.85□□□□□ -0.83
SIK3-203ENST00000415541 TAF3Q5VWG9 929 aa9.85□□□□□ -0.83
SIK3-203ENST00000415541 CCDC146Q8IYE0 955 aa9.85□□□□□ -0.83
SIK3-203ENST00000415541 CABP2Q9NPB3 220 aa9.85□□□□□ -0.83
SIK3-203ENST00000415541 OFD1O75665 1012 aa9.84□□□□□ -0.83
SIK3-203ENST00000415541 KDM5CP41229 1560 aa9.84□□□□□ -0.83
SIK3-203ENST00000415541 STAC3Q96MF2 364 aa9.84□□□□□ -0.83
SIK3-203ENST00000415541 MYBBP1AQ9BQG0 1328 aaKnown RBP9.84□□□□□ -0.83
SIK3-203ENST00000415541 DDX11L8A8MPP1 907 aa9.84□□□□□ -0.83
SIK3-203ENST00000415541 CEBPAP49715 358 aaPredicted RBP9.84□□□□□ -0.83
SIK3-203ENST00000415541 HDGFL2Q7Z4V5 671 aaPredicted RBP9.84□□□□□ -0.83
SIK3-203ENST00000415541 TRAK2O60296 914 aa9.83□□□□□ -0.84
SIK3-203ENST00000415541 MCM4P33991 863 aa9.83□□□□□ -0.84
SIK3-203ENST00000415541 C8orf34Q49A92 452 aa9.83□□□□□ -0.84
SIK3-203ENST00000415541 CRBNQ96SW2 442 aa9.83□□□□□ -0.84
SIK3-203ENST00000415541 SLC52A1Q9NWF4 448 aa9.83□□□□□ -0.84
SIK3-203ENST00000415541 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.83□□□□□ -0.84
SIK3-203ENST00000415541 ZSCAN30Q86W11 494 aa9.83□□□□□ -0.84
SIK3-203ENST00000415541 SLC12A5Q9H2X9 1139 aa9.83□□□□□ -0.84
SIK3-203ENST00000415541 CHMP4BQ9H444 224 aaKnown RBP9.83□□□□□ -0.84
SIK3-203ENST00000415541 FAM135AQ9P2D6 1515 aa9.83□□□□□ -0.84
SIK3-203ENST00000415541 KIF20AO95235 890 aa9.82□□□□□ -0.84
SIK3-203ENST00000415541 GTF2E1P29083 439 aaPredicted RBP9.82□□□□□ -0.84
SIK3-203ENST00000415541 DMTNQ08495 405 aa9.82□□□□□ -0.84
SIK3-203ENST00000415541 PNISRQ8TF01 805 aaKnown RBP9.82□□□□□ -0.84
SIK3-203ENST00000415541 EVC2Q86UK5 1308 aa9.82□□□□□ -0.84
SIK3-203ENST00000415541 CDC42BPAQ5VT25 1732 aa9.82□□□□□ -0.84
SIK3-203ENST00000415541 U2AF1L5P0DN76 240 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 8585.6 ms