RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 ZNF692Q9BU19 519 aaPredicted RBP15.04■□□□□ -0
PTPRF-205ENST00000414879 RAPGEF6Q8TEU7 1601 aa15.04■□□□□ -0
PTPRF-205ENST00000414879 TXNDC2Q86VQ3 553 aa15.03■□□□□ -0
PTPRF-205ENST00000414879 TMX4Q9H1E5 349 aaPredicted RBP15.03■□□□□ -0
PTPRF-205ENST00000414879 ABCC5O15440 1437 aa15.03■□□□□ -0
PTPRF-205ENST00000414879 GPRASP1Q5JY77 1395 aa15.02■□□□□ -0
PTPRF-205ENST00000414879 TEFQ10587 303 aa15.02□□□□□ -0.01
PTPRF-205ENST00000414879 CCDC146Q8IYE0 955 aa15.01□□□□□ -0.01
PTPRF-205ENST00000414879 ZKSCAN2Q63HK3 967 aa15.01□□□□□ -0.01
PTPRF-205ENST00000414879 CDK11BP21127 795 aaKnown RBP15.01□□□□□ -0.01
PTPRF-205ENST00000414879 CEP170Q5SW79 1584 aa15□□□□□ -0.01
PTPRF-205ENST00000414879 ATAD2Q6PL18 1390 aa15□□□□□ -0.01
PTPRF-205ENST00000414879 CFAP70Q5T0N1 1121 aa15□□□□□ -0.01
PTPRF-205ENST00000414879 API5Q9BZZ5 524 aaKnown RBP15□□□□□ -0.01
PTPRF-205ENST00000414879 CCDC9Q9Y3X0 531 aaKnown RBP15□□□□□ -0.01
PTPRF-205ENST00000414879 DENND4BO75064 1496 aaPredicted RBP15□□□□□ -0.01
PTPRF-205ENST00000414879 NBR1Q14596 966 aa15□□□□□ -0.01
PTPRF-205ENST00000414879 GNAI1P63096 354 aa14.99□□□□□ -0.01
PTPRF-205ENST00000414879 NUTM2FA1L443 756 aa14.99□□□□□ -0.01
PTPRF-205ENST00000414879 EVA1CP58658 441 aa14.99□□□□□ -0.01
PTPRF-205ENST00000414879 NCOA1Q15788 1441 aa14.99□□□□□ -0.01
PTPRF-205ENST00000414879 ERBINQ96RT1 1412 aa14.99□□□□□ -0.01
PTPRF-205ENST00000414879 NOP58Q9Y2X3 529 aaKnown RBP14.98□□□□□ -0.01
PTPRF-205ENST00000414879 DISP1Q96F81 1524 aa14.98□□□□□ -0.01
PTPRF-205ENST00000414879 CENPQQ7L2Z9 268 aaPredicted RBP14.98□□□□□ -0.01
PTPRF-205ENST00000414879 LTV1Q96GA3 475 aaPredicted RBP14.98□□□□□ -0.01
PTPRF-205ENST00000414879 ANKLE2Q86XL3 938 aa14.97□□□□□ -0.01
PTPRF-205ENST00000414879 CHMP4CQ96CF2 233 aa14.97□□□□□ -0.01
PTPRF-205ENST00000414879 ITSN2Q9NZM3 1697 aa14.97□□□□□ -0.01
PTPRF-205ENST00000414879 TRIM44Q96DX7 344 aaPredicted RBP14.97□□□□□ -0.01
PTPRF-205ENST00000414879 RAPGEF3O95398 923 aa14.96□□□□□ -0.01
PTPRF-205ENST00000414879 TEX14Q8IWB6 1497 aa14.96□□□□□ -0.01
PTPRF-205ENST00000414879 KIF16BQ96L93 1317 aa14.96□□□□□ -0.01
PTPRF-205ENST00000414879 TTC5Q8N0Z6 440 aa14.96□□□□□ -0.02
PTPRF-205ENST00000414879 FANCAO15360 1455 aa14.95□□□□□ -0.02
PTPRF-205ENST00000414879 TAF7LQ5H9L4 462 aa14.95□□□□□ -0.02
PTPRF-205ENST00000414879 DDX19BQ9UMR2 479 aa14.95□□□□□ -0.02
PTPRF-205ENST00000414879 DDX58O95786 925 aaKnown RBP14.95□□□□□ -0.02
PTPRF-205ENST00000414879 NEXNQ0ZGT2 675 aa14.95□□□□□ -0.02
PTPRF-205ENST00000414879 APAF1O14727 1248 aa14.94□□□□□ -0.02
PTPRF-205ENST00000414879 GORABQ5T7V8 394 aa14.94□□□□□ -0.02
PTPRF-205ENST00000414879 RIPK4P57078 832 aa14.93□□□□□ -0.02
PTPRF-205ENST00000414879 LRRFIP1Q32MZ4 808 aaKnown RBP14.93□□□□□ -0.02
PTPRF-205ENST00000414879 DHX29Q7Z478 1369 aaKnown RBP14.93□□□□□ -0.02
PTPRF-205ENST00000414879 PLCH2O75038 1416 aa14.93□□□□□ -0.02
PTPRF-205ENST00000414879 HTATSF1O43719 755 aaKnown RBP14.93□□□□□ -0.02
PTPRF-205ENST00000414879 RRP1P56182 461 aaKnown RBP14.93□□□□□ -0.02
PTPRF-205ENST00000414879 TMEM132EQ6IEE7 984 aa14.92□□□□□ -0.02
PTPRF-205ENST00000414879 RAPGEF4Q8WZA2 1011 aa14.92□□□□□ -0.02
PTPRF-205ENST00000414879 GAS2L2Q8NHY3 880 aa14.92□□□□□ -0.02
PTPRF-205ENST00000414879 GPATCH8Q9UKJ3 1502 aaKnown RBP14.92□□□□□ -0.02
PTPRF-205ENST00000414879 GOLGA6L4A6NEF3 574 aa14.91□□□□□ -0.02
PTPRF-205ENST00000414879 PRAM1Q96QH2 718 aa14.91□□□□□ -0.02
PTPRF-205ENST00000414879 GOLGA6L6A8MZA4 724 aa14.91□□□□□ -0.02
PTPRF-205ENST00000414879 SLC4A10Q6U841 1118 aa14.91□□□□□ -0.02
PTPRF-205ENST00000414879 CABP2Q9NPB3 220 aa14.91□□□□□ -0.02
PTPRF-205ENST00000414879 TCOF1Q13428 1488 aaKnown RBP14.91□□□□□ -0.02
PTPRF-205ENST00000414879 RTEL1-TNFRSF6BF6WH68 1400 aa14.9□□□□□ -0.02
PTPRF-205ENST00000414879 SMG6Q86US8 1419 aaKnown RBP14.9□□□□□ -0.02
PTPRF-205ENST00000414879 PROSER2Q86WR7 435 aaPredicted RBP14.9□□□□□ -0.02
PTPRF-205ENST00000414879 NRDCO43847 1150 aa14.9□□□□□ -0.02
PTPRF-205ENST00000414879 CT47B1P0C2W7 299 aaPredicted RBP14.89□□□□□ -0.03
PTPRF-205ENST00000414879 NLRP6P59044 892 aa14.89□□□□□ -0.03
PTPRF-205ENST00000414879 ATP10BO94823 1461 aa14.89□□□□□ -0.03
PTPRF-205ENST00000414879 NUP153P49790 1475 aaKnown RBP14.89□□□□□ -0.03
PTPRF-205ENST00000414879 ZNF330Q9Y3S2 320 aaPredicted RBP14.89□□□□□ -0.03
PTPRF-205ENST00000414879 RRP7AQ9Y3A4 280 aaKnown RBP14.89□□□□□ -0.03
PTPRF-205ENST00000414879 GBP4Q96PP9 640 aa14.88□□□□□ -0.03
PTPRF-205ENST00000414879 HSP90AB4PQ58FF6 505 aa14.88□□□□□ -0.03
PTPRF-205ENST00000414879 DUOX2Q9NRD8 1548 aa14.88□□□□□ -0.03
PTPRF-205ENST00000414879 HMGB2P26583 209 aaKnown RBP14.88□□□□□ -0.03
PTPRF-205ENST00000414879 NBPF8Q3BBV2 869 aa14.87□□□□□ -0.03
PTPRF-205ENST00000414879 WWC1Q8IX03 1113 aa14.87□□□□□ -0.03
PTPRF-205ENST00000414879 PPP2R1AP30153 589 aa14.87□□□□□ -0.03
PTPRF-205ENST00000414879 CLUAP1Q96AJ1 413 aa14.87□□□□□ -0.03
PTPRF-205ENST00000414879 FAM135AQ9P2D6 1515 aa14.87□□□□□ -0.03
PTPRF-205ENST00000414879 NBPF1Q3BBV0 1214 aa14.87□□□□□ -0.03
PTPRF-205ENST00000414879 DZIP1LQ8IYY4 767 aaKnown RBP14.87□□□□□ -0.03
PTPRF-205ENST00000414879 GGNBP2Q9H3C7 697 aa14.87□□□□□ -0.03
PTPRF-205ENST00000414879 KIF3AQ9Y496 699 aa14.87□□□□□ -0.03
PTPRF-205ENST00000414879 CDK19Q9BWU1 502 aa14.86□□□□□ -0.03
PTPRF-205ENST00000414879 WDR7Q9Y4E6 1490 aa14.86□□□□□ -0.03
PTPRF-205ENST00000414879 MTHFSP49914 203 aa14.86□□□□□ -0.03
PTPRF-205ENST00000414879 CHMP3Q9Y3E7 222 aa14.86□□□□□ -0.03
PTPRF-205ENST00000414879 CHD1O14646 1710 aa14.85□□□□□ -0.03
PTPRF-205ENST00000414879 GTF2E1P29083 439 aaPredicted RBP14.85□□□□□ -0.03
PTPRF-205ENST00000414879 NAP1L2Q9ULW6 460 aaPredicted RBP14.85□□□□□ -0.03
PTPRF-205ENST00000414879 PLEKHO1Q53GL0 409 aaPredicted RBP14.85□□□□□ -0.03
PTPRF-205ENST00000414879 RPRD2Q5VT52 1461 aaKnown RBP14.85□□□□□ -0.03
PTPRF-205ENST00000414879 PNISRQ8TF01 805 aaKnown RBP14.85□□□□□ -0.03
PTPRF-205ENST00000414879 NINLQ9Y2I6 1382 aa14.84□□□□□ -0.03
PTPRF-205ENST00000414879 APBB1O00213 710 aa14.84□□□□□ -0.03
PTPRF-205ENST00000414879 PTMAP06454 111 aaKnown RBP14.84□□□□□ -0.03
PTPRF-205ENST00000414879 ZNF518AQ6AHZ1 1483 aa14.84□□□□□ -0.03
PTPRF-205ENST00000414879 HSP90B1P14625 803 aaKnown RBP14.84□□□□□ -0.03
PTPRF-205ENST00000414879 CCDC34Q96HJ3 373 aa14.83□□□□□ -0.03
PTPRF-205ENST00000414879 CSPP1Q1MSJ5 1256 aa14.83□□□□□ -0.04
PTPRF-205ENST00000414879 ABTB2Q8N961 1025 aa14.83□□□□□ -0.04
PTPRF-205ENST00000414879 SHANK2Q9UPX8 1470 aa14.83□□□□□ -0.04
PTPRF-205ENST00000414879 TRIM6-TRIM34B2RNG4 842 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms