RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 ANKLE1Q8NAG6 615 aa6.36□□□□□ -1.39
SF3B1-203ENST00000414174 AAASQ9NRG9 546 aa6.36□□□□□ -1.39
SF3B1-203ENST00000414174 NUDT18Q6ZVK8 323 aa6.35□□□□□ -1.39
SF3B1-203ENST00000414174 PRR14Q9BWN1 585 aa6.35□□□□□ -1.39
SF3B1-203ENST00000414174 RBM27Q9P2N5 1060 aaKnown RBP6.35□□□□□ -1.39
SF3B1-203ENST00000414174 FAM187AA6NFU0 413 aa6.34□□□□□ -1.39
SF3B1-203ENST00000414174 SPDYE16A6NNV3 312 aaPredicted RBP6.34□□□□□ -1.39
SF3B1-203ENST00000414174 WIPF1O43516 503 aa6.34□□□□□ -1.39
SF3B1-203ENST00000414174 WFS1O76024 890 aa6.34□□□□□ -1.39
SF3B1-203ENST00000414174 CFAP44Q96MT7 982 aa6.34□□□□□ -1.39
SF3B1-203ENST00000414174 RNF40O75150 1001 aa6.33□□□□□ -1.4
SF3B1-203ENST00000414174 INSM1Q01101 510 aaPredicted RBP6.33□□□□□ -1.4
SF3B1-203ENST00000414174 PDIA6Q15084 440 aa6.33□□□□□ -1.4
SF3B1-203ENST00000414174 ZNF697Q5TEC3 545 aa6.33□□□□□ -1.4
SF3B1-203ENST00000414174 LIAT1Q6ZQX7 453 aa6.33□□□□□ -1.4
SF3B1-203ENST00000414174 CRIPAKQ8N1N5 446 aa6.33□□□□□ -1.4
SF3B1-203ENST00000414174 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.33□□□□□ -1.4
SF3B1-203ENST00000414174 SLC4A3P48751 1232 aa6.32□□□□□ -1.4
SF3B1-203ENST00000414174 SWT1Q5T5J6 900 aaKnown RBP6.32□□□□□ -1.4
SF3B1-203ENST00000414174 LMOD2Q6P5Q4 547 aa6.31□□□□□ -1.4
SF3B1-203ENST00000414174 TTC13Q8NBP0 860 aa6.31□□□□□ -1.4
SF3B1-203ENST00000414174 PCDHB3Q9Y5E6 796 aa6.31□□□□□ -1.4
SF3B1-203ENST00000414174 LOC100996750A0A140TA64 210 aa6.3□□□□□ -1.4
SF3B1-203ENST00000414174 ST8SIA5O15466 376 aa6.3□□□□□ -1.4
SF3B1-203ENST00000414174 KRTAP4-6Q9BYQ5 205 aa6.3□□□□□ -1.4
SF3B1-203ENST00000414174 TNFRSF10AO00220 468 aa6.29□□□□□ -1.4
SF3B1-203ENST00000414174 PRIM1P49642 420 aaKnown RBP6.29□□□□□ -1.4
SF3B1-203ENST00000414174 NFX1Q12986 1120 aaKnown RBP6.29□□□□□ -1.4
SF3B1-203ENST00000414174 AVPP01185 164 aa6.28□□□□□ -1.4
SF3B1-203ENST00000414174 BLOC1S3Q6QNY0 202 aa6.28□□□□□ -1.4
SF3B1-203ENST00000414174 TSHZ2Q9NRE2 1034 aa6.28□□□□□ -1.4
SF3B1-203ENST00000414174 PPEF1O14829 653 aaPredicted RBP6.27□□□□□ -1.41
SF3B1-203ENST00000414174 EYA1Q99502 592 aa6.26□□□□□ -1.41
SF3B1-203ENST00000414174 C11orf95C9JLR9 678 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-203ENST00000414174 S1PR4O95977 384 aa6.25□□□□□ -1.41
SF3B1-203ENST00000414174 OSBPP22059 807 aa6.25□□□□□ -1.41
SF3B1-203ENST00000414174 SMCPP49901 116 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-203ENST00000414174 PKD2L1Q9P0L9 805 aa6.25□□□□□ -1.41
SF3B1-203ENST00000414174 DACH1Q9UI36 760 aa6.25□□□□□ -1.41
SF3B1-203ENST00000414174 ARIH1Q9Y4X5 557 aaPredicted RBP6.25□□□□□ -1.41
SF3B1-203ENST00000414174 RANGAP1P46060 587 aaPredicted RBP6.24□□□□□ -1.41
SF3B1-203ENST00000414174 CTC1Q2NKJ3 1217 aa6.24□□□□□ -1.41
SF3B1-203ENST00000414174 GMPR2Q9P2T1 348 aaKnown RBP6.24□□□□□ -1.41
SF3B1-203ENST00000414174 GRXCR2A6NFK2 248 aa6.23□□□□□ -1.41
SF3B1-203ENST00000414174 AXIN1O15169 862 aa6.23□□□□□ -1.41
SF3B1-203ENST00000414174 ACTN4O43707 911 aaKnown RBP6.23□□□□□ -1.41
SF3B1-203ENST00000414174 E2F4Q16254 413 aa6.23□□□□□ -1.41
SF3B1-203ENST00000414174 NPDC1Q9NQX5 325 aaPredicted RBP6.23□□□□□ -1.41
SF3B1-203ENST00000414174 TLL1O43897 1013 aa6.22□□□□□ -1.41
SF3B1-203ENST00000414174 ADH1BP00325 375 aa6.22□□□□□ -1.41
SF3B1-203ENST00000414174 CDHR5Q9HBB8 845 aa6.22□□□□□ -1.41
SF3B1-203ENST00000414174 TOR4AQ9NXH8 423 aa6.22□□□□□ -1.41
SF3B1-203ENST00000414174 RPIAP49247 311 aa6.21□□□□□ -1.42
SF3B1-203ENST00000414174 PADI6Q6TGC4 694 aa6.21□□□□□ -1.42
SF3B1-203ENST00000414174 TIMELESSQ9UNS1 1208 aa6.21□□□□□ -1.42
SF3B1-203ENST00000414174 NR1I2O75469 434 aa6.2□□□□□ -1.42
SF3B1-203ENST00000414174 FOXC1Q12948 553 aa6.2□□□□□ -1.42
SF3B1-203ENST00000414174 KMT5BQ4FZB7 885 aa6.2□□□□□ -1.42
SF3B1-203ENST00000414174 PLA2G2CQ5R387 149 aa6.2□□□□□ -1.42
SF3B1-203ENST00000414174 SLC6A16Q9GZN6 736 aa6.2□□□□□ -1.42
SF3B1-203ENST00000414174 FAM181BA6NEQ2 426 aa6.19□□□□□ -1.42
SF3B1-203ENST00000414174 TERTO14746 1132 aaKnown RBP6.19□□□□□ -1.42
SF3B1-203ENST00000414174 HOMEZQ8IX15 550 aa6.19□□□□□ -1.42
SF3B1-203ENST00000414174 CD2BP2O95400 341 aaKnown RBP6.18□□□□□ -1.42
SF3B1-203ENST00000414174 CYP4X1Q8N118 509 aa6.18□□□□□ -1.42
SF3B1-203ENST00000414174 LCE2CQ5TA81 110 aa6.17□□□□□ -1.42
SF3B1-203ENST00000414174 KCNV2Q8TDN2 545 aa6.17□□□□□ -1.42
SF3B1-203ENST00000414174 DNAJB2P25686 324 aa6.16□□□□□ -1.42
SF3B1-203ENST00000414174 TMEM134Q9H6X4 195 aa6.16□□□□□ -1.42
SF3B1-203ENST00000414174 PLCB2Q00722 1185 aa6.15□□□□□ -1.42
SF3B1-203ENST00000414174 SCUBE3Q8IX30 993 aa6.15□□□□□ -1.42
SF3B1-203ENST00000414174 SENP2Q9HC62 589 aa6.15□□□□□ -1.42
SF3B1-203ENST00000414174 WDR70Q9NW82 654 aa6.15□□□□□ -1.42
SF3B1-203ENST00000414174 CFHP08603 1231 aa6.13□□□□□ -1.43
SF3B1-203ENST00000414174 SNRPBP14678 240 aaKnown RBP6.13□□□□□ -1.43
SF3B1-203ENST00000414174 RBM46Q8TBY0 533 aaKnown RBP6.13□□□□□ -1.43
SF3B1-203ENST00000414174 TRIM47Q96LD4 638 aa6.13□□□□□ -1.43
SF3B1-203ENST00000414174 ATP13A2Q9NQ11 1180 aa6.13□□□□□ -1.43
SF3B1-203ENST00000414174 MLLT3P42568 568 aaPredicted RBP6.12□□□□□ -1.43
SF3B1-203ENST00000414174 SPSB2Q99619 263 aa6.12□□□□□ -1.43
SF3B1-203ENST00000414174 KIFC2Q96AC6 838 aa6.11□□□□□ -1.43
SF3B1-203ENST00000414174 TTC24A2A3L6 582 aaPredicted RBP6.1□□□□□ -1.43
SF3B1-203ENST00000414174 TULP1O00294 542 aaPredicted RBP6.1□□□□□ -1.43
SF3B1-203ENST00000414174 SLC10A3P09131 477 aa6.1□□□□□ -1.43
SF3B1-203ENST00000414174 SUZ12Q15022 739 aaKnown RBP6.1□□□□□ -1.43
SF3B1-203ENST00000414174 SLC16A10Q8TF71 515 aa6.1□□□□□ -1.43
SF3B1-203ENST00000414174 ARHGEF1Q92888 912 aaKnown RBP6.1□□□□□ -1.43
SF3B1-203ENST00000414174 BCANQ96GW7 911 aa6.1□□□□□ -1.43
SF3B1-203ENST00000414174 RCCD1A6NED2 376 aa6.09□□□□□ -1.43
SF3B1-203ENST00000414174 EIF5BO60841 1220 aaKnown RBP6.09□□□□□ -1.43
SF3B1-203ENST00000414174 SMPD1P17405 629 aa6.09□□□□□ -1.43
SF3B1-203ENST00000414174 LORP23490 312 aaPredicted RBP6.09□□□□□ -1.43
SF3B1-203ENST00000414174 ZSCAN1Q8NBB4 408 aa6.09□□□□□ -1.43
SF3B1-203ENST00000414174 SNIP1Q8TAD8 396 aaKnown RBP6.09□□□□□ -1.43
SF3B1-203ENST00000414174 ADGRG1Q9Y653 693 aa6.09□□□□□ -1.43
SF3B1-203ENST00000414174 NPAS3Q8IXF0 933 aa6.08□□□□□ -1.44
SF3B1-203ENST00000414174 WNT7AO00755 349 aa6.07□□□□□ -1.44
SF3B1-203ENST00000414174 RSPH4AQ5TD94 716 aa6.07□□□□□ -1.44
SF3B1-203ENST00000414174 KDM2AQ9Y2K7 1162 aa6.07□□□□□ -1.44
SF3B1-203ENST00000414174 PTGDRQ13258 359 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms