RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 LTKP29376 864 aa13.36□□□□□ -0.27
SMPD4-203ENST00000412570 TMF1P82094 1093 aa13.36□□□□□ -0.27
SMPD4-203ENST00000412570 EFCAB6Q5THR3 1501 aa13.35□□□□□ -0.27
SMPD4-203ENST00000412570 DISP3Q9P2K9 1392 aa13.35□□□□□ -0.27
SMPD4-203ENST00000412570 MRS2Q9HD23 443 aa13.35□□□□□ -0.27
SMPD4-203ENST00000412570 NCKAP5LQ9HCH0 1330 aa13.35□□□□□ -0.27
SMPD4-203ENST00000412570 C14orf37Q86TY3 774 aa13.34□□□□□ -0.27
SMPD4-203ENST00000412570 CLTCQ00610 1675 aaKnown RBP13.34□□□□□ -0.27
SMPD4-203ENST00000412570 TNRQ92752 1358 aa13.33□□□□□ -0.28
SMPD4-203ENST00000412570 MAGI2Q86UL8 1455 aa13.33□□□□□ -0.28
SMPD4-203ENST00000412570 SLC12A5Q9H2X9 1139 aa13.33□□□□□ -0.28
SMPD4-203ENST00000412570 TET3O43151 1660 aa13.32□□□□□ -0.28
SMPD4-203ENST00000412570 PTPRTO14522 1441 aa13.32□□□□□ -0.28
SMPD4-203ENST00000412570 EID1Q9Y6B2 187 aa13.31□□□□□ -0.28
SMPD4-203ENST00000412570 SPHKAPQ2M3C7 1700 aa13.31□□□□□ -0.28
SMPD4-203ENST00000412570 RNF17Q9BXT8 1623 aaKnown RBP13.3□□□□□ -0.28
SMPD4-203ENST00000412570 TRPM2O94759 1503 aa13.3□□□□□ -0.28
SMPD4-203ENST00000412570 TESK2Q96S53 571 aa13.3□□□□□ -0.28
SMPD4-203ENST00000412570 CENPJQ9HC77 1338 aaPredicted RBP13.3□□□□□ -0.28
SMPD4-203ENST00000412570 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMPD4-203ENST00000412570 HNRNPUQ00839 825 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMPD4-203ENST00000412570 CAMSAP1Q5T5Y3 1602 aa13.29□□□□□ -0.28
SMPD4-203ENST00000412570 PPM1GO15355 546 aaPredicted RBP13.28□□□□□ -0.28
SMPD4-203ENST00000412570 C14orf93Q9H972 538 aaKnown RBP13.28□□□□□ -0.28
SMPD4-203ENST00000412570 FBLN1P23142 703 aa13.28□□□□□ -0.28
SMPD4-203ENST00000412570 CNTLNQ9NXG0 1405 aa13.28□□□□□ -0.28
SMPD4-203ENST00000412570 ERVK-7P63135 1459 aa13.27□□□□□ -0.28
SMPD4-203ENST00000412570 ARHGEF40Q8TER5 1519 aa13.27□□□□□ -0.28
SMPD4-203ENST00000412570 KNSTRNQ9Y448 316 aa13.27□□□□□ -0.29
SMPD4-203ENST00000412570 RALGAPBQ86X10 1494 aa13.26□□□□□ -0.29
SMPD4-203ENST00000412570 RIMS2Q9UQ26 1411 aa13.26□□□□□ -0.29
SMPD4-203ENST00000412570 DEPDC5O75140 1603 aa13.26□□□□□ -0.29
SMPD4-203ENST00000412570 SYNMO15061 1565 aa13.26□□□□□ -0.29
SMPD4-203ENST00000412570 UHRF1BP1Q6BDS2 1440 aa13.26□□□□□ -0.29
SMPD4-203ENST00000412570 MROH2AA6NES4 1674 aa13.26□□□□□ -0.29
SMPD4-203ENST00000412570 ZBTB7CA1YPR0 619 aa13.25□□□□□ -0.29
SMPD4-203ENST00000412570 PRKRIP1Q9H875 184 aaPredicted RBP13.25□□□□□ -0.29
SMPD4-203ENST00000412570 ZMYM4Q5VZL5 1548 aa13.25□□□□□ -0.29
SMPD4-203ENST00000412570 EIF2AK4Q9P2K8 1649 aaKnown RBP13.25□□□□□ -0.29
SMPD4-203ENST00000412570 PLEKHH1Q9ULM0 1364 aa13.25□□□□□ -0.29
SMPD4-203ENST00000412570 CENPBP07199 599 aaPredicted RBP13.25□□□□□ -0.29
SMPD4-203ENST00000412570 VWDEQ8N2E2 1590 aa13.25□□□□□ -0.29
SMPD4-203ENST00000412570 PMFBP1Q8TBY8 1022 aa13.24□□□□□ -0.29
SMPD4-203ENST00000412570 NUTM2GQ5VZR2 741 aa13.24□□□□□ -0.29
SMPD4-203ENST00000412570 THEMISQ8N1K5 641 aaPredicted RBP13.24□□□□□ -0.29
SMPD4-203ENST00000412570 LMOD2Q6P5Q4 547 aa13.23□□□□□ -0.29
SMPD4-203ENST00000412570 METP08581 1390 aa13.23□□□□□ -0.29
SMPD4-203ENST00000412570 BCORL1Q5H9F3 1711 aa13.23□□□□□ -0.29
SMPD4-203ENST00000412570 KIF1BO60333 1816 aa13.22□□□□□ -0.29
SMPD4-203ENST00000412570 XPCQ01831 940 aaPredicted RBP13.22□□□□□ -0.29
SMPD4-203ENST00000412570 AMOTL2Q9Y2J4 779 aa13.22□□□□□ -0.29
SMPD4-203ENST00000412570 CDK19Q9BWU1 502 aa13.21□□□□□ -0.29
SMPD4-203ENST00000412570 CABP1Q9NZU7 370 aa13.21□□□□□ -0.29
SMPD4-203ENST00000412570 SCAF1Q9H7N4 1312 aaKnown RBP13.21□□□□□ -0.29
SMPD4-203ENST00000412570 GGNBP2Q9H3C7 697 aa13.21□□□□□ -0.29
SMPD4-203ENST00000412570 MYO5BQ9ULV0 1848 aa13.21□□□□□ -0.3
SMPD4-203ENST00000412570 HDGFP51858 240 aaKnown RBP13.21□□□□□ -0.3
SMPD4-203ENST00000412570 RPGRIP1LQ68CZ1 1315 aa13.2□□□□□ -0.3
SMPD4-203ENST00000412570 PPP6R1Q9UPN7 881 aa13.19□□□□□ -0.3
SMPD4-203ENST00000412570 EIF3AQ14152 1382 aaKnown RBP13.19□□□□□ -0.3
SMPD4-203ENST00000412570 KCNA6P17658 529 aa13.19□□□□□ -0.3
SMPD4-203ENST00000412570 IRX6P78412 446 aaPredicted RBP13.19□□□□□ -0.3
SMPD4-203ENST00000412570 A2ML1A8K2U0 1454 aa13.19□□□□□ -0.3
SMPD4-203ENST00000412570 SCAF11Q99590 1463 aaKnown RBP13.18□□□□□ -0.3
SMPD4-203ENST00000412570 ANKLE2Q86XL3 938 aa13.18□□□□□ -0.3
SMPD4-203ENST00000412570 PREX1Q8TCU6 1659 aa13.18□□□□□ -0.3
SMPD4-203ENST00000412570 PAK3O75914 559 aaPredicted RBP13.18□□□□□ -0.3
SMPD4-203ENST00000412570 NEUROD2Q15784 382 aa13.18□□□□□ -0.3
SMPD4-203ENST00000412570 PIK3C2BO00750 1634 aa13.18□□□□□ -0.3
SMPD4-203ENST00000412570 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMPD4-203ENST00000412570 LMTK2Q8IWU2 1503 aa13.17□□□□□ -0.3
SMPD4-203ENST00000412570 TMEM2Q9UHN6 1383 aa13.17□□□□□ -0.3
SMPD4-203ENST00000412570 ZRANB1Q9UGI0 708 aa13.17□□□□□ -0.3
SMPD4-203ENST00000412570 CARD14Q9BXL6 1004 aa13.17□□□□□ -0.3
SMPD4-203ENST00000412570 EVC2Q86UK5 1308 aa13.16□□□□□ -0.3
SMPD4-203ENST00000412570 GTF3C3Q9Y5Q9 886 aa13.16□□□□□ -0.3
SMPD4-203ENST00000412570 TRPM1Q7Z4N2 1603 aa13.16□□□□□ -0.3
SMPD4-203ENST00000412570 MADDQ8WXG6 1647 aa13.16□□□□□ -0.3
SMPD4-203ENST00000412570 CCDC146Q8IYE0 955 aa13.16□□□□□ -0.3
SMPD4-203ENST00000412570 ARHGAP31Q2M1Z3 1444 aa13.16□□□□□ -0.3
SMPD4-203ENST00000412570 PIK3C2GO75747 1445 aa13.15□□□□□ -0.3
SMPD4-203ENST00000412570 RIMS1Q86UR5 1692 aaKnown RBP13.15□□□□□ -0.3
SMPD4-203ENST00000412570 ADGRB3O60242 1522 aa13.15□□□□□ -0.3
SMPD4-203ENST00000412570 KDM4FA0A1W2PPD8 638 aa13.15□□□□□ -0.3
SMPD4-203ENST00000412570 CDCA8Q53HL2 280 aa13.14□□□□□ -0.31
SMPD4-203ENST00000412570 MORC1Q86VD1 984 aa13.14□□□□□ -0.31
SMPD4-203ENST00000412570 AGLP35573 1532 aa13.14□□□□□ -0.31
SMPD4-203ENST00000412570 YTHDC2Q9H6S0 1430 aaKnown RBP13.13□□□□□ -0.31
SMPD4-203ENST00000412570 KTN1Q86UP2 1357 aaKnown RBP13.12□□□□□ -0.31
SMPD4-203ENST00000412570 NEXMIFQ5QGS0 1516 aa13.12□□□□□ -0.31
SMPD4-203ENST00000412570 DDX17Q92841 729 aaKnown RBP13.12□□□□□ -0.31
SMPD4-203ENST00000412570 GPRASP1Q5JY77 1395 aa13.11□□□□□ -0.31
SMPD4-203ENST00000412570 NGDNQ8NEJ9 315 aaKnown RBP13.11□□□□□ -0.31
SMPD4-203ENST00000412570 PROSER2Q86WR7 435 aaPredicted RBP13.11□□□□□ -0.31
SMPD4-203ENST00000412570 NUDT16Q96DE0 195 aaKnown RBP13.1□□□□□ -0.31
SMPD4-203ENST00000412570 ROBO2Q9HCK4 1378 aa13.1□□□□□ -0.31
SMPD4-203ENST00000412570 FER1L4A9Z1Z3 1794 aa13.1□□□□□ -0.31
SMPD4-203ENST00000412570 U2SURPO15042 1029 aaKnown RBP13.09□□□□□ -0.31
SMPD4-203ENST00000412570 PER1O15534 1290 aaPredicted RBP13.09□□□□□ -0.31
SMPD4-203ENST00000412570 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms