RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 SPATA31D1Q6ZQQ2 1576 aa12.86□□□□□ -0.35
LINC02539-201ENST00000411615 PTPRMP28827 1452 aa12.86□□□□□ -0.35
LINC02539-201ENST00000411615 SETD1BQ9UPS6 1966 aaKnown RBP12.85□□□□□ -0.35
LINC02539-201ENST00000411615 PREX1Q8TCU6 1659 aa12.85□□□□□ -0.35
LINC02539-201ENST00000411615 SPHKAPQ2M3C7 1700 aa12.85□□□□□ -0.35
LINC02539-201ENST00000411615 ERVK-7P63135 1459 aa12.85□□□□□ -0.35
LINC02539-201ENST00000411615 ANKRD30BQ9BXX2 1392 aa12.84□□□□□ -0.35
LINC02539-201ENST00000411615 SLC52A1Q9NWF4 448 aa12.84□□□□□ -0.35
LINC02539-201ENST00000411615 CFAP65Q6ZU64 1925 aaKnown RBP12.84□□□□□ -0.35
LINC02539-201ENST00000411615 PLA2R1Q13018 1463 aa12.83□□□□□ -0.36
LINC02539-201ENST00000411615 TRPM2O94759 1503 aa12.83□□□□□ -0.36
LINC02539-201ENST00000411615 FBXO31Q5XUX0 539 aaPredicted RBP12.82□□□□□ -0.36
LINC02539-201ENST00000411615 CEBPAP49715 358 aaPredicted RBP12.81□□□□□ -0.36
LINC02539-201ENST00000411615 SPDYE1Q8NFV5 336 aaPredicted RBP12.81□□□□□ -0.36
LINC02539-201ENST00000411615 TNRQ92752 1358 aa12.81□□□□□ -0.36
LINC02539-201ENST00000411615 PIK3C2BO00750 1634 aa12.8□□□□□ -0.36
LINC02539-201ENST00000411615 SYNMO15061 1565 aa12.8□□□□□ -0.36
LINC02539-201ENST00000411615 NLRP1Q9C000 1473 aa12.79□□□□□ -0.36
LINC02539-201ENST00000411615 CCDC144AA2RUR9 1427 aa12.79□□□□□ -0.36
LINC02539-201ENST00000411615 NEURL4Q96JN8 1562 aa12.78□□□□□ -0.36
LINC02539-201ENST00000411615 KDM5AP29375 1690 aaKnown RBP12.78□□□□□ -0.36
LINC02539-201ENST00000411615 IDI1Q13907 227 aa12.78□□□□□ -0.36
LINC02539-201ENST00000411615 CHADLQ6NUI6 762 aa12.78□□□□□ -0.36
LINC02539-201ENST00000411615 CCER1Q8TC90 406 aaPredicted RBP12.78□□□□□ -0.36
LINC02539-201ENST00000411615 EVX2Q03828 476 aa12.77□□□□□ -0.37
LINC02539-201ENST00000411615 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
LINC02539-201ENST00000411615 CLTCL1P53675 1640 aa12.76□□□□□ -0.37
LINC02539-201ENST00000411615 KIF1BO60333 1816 aa12.75□□□□□ -0.37
LINC02539-201ENST00000411615 MYO3AQ8NEV4 1616 aa12.74□□□□□ -0.37
LINC02539-201ENST00000411615 A2ML1A8K2U0 1454 aa12.74□□□□□ -0.37
LINC02539-201ENST00000411615 TIMELESSQ9UNS1 1208 aa12.73□□□□□ -0.37
LINC02539-201ENST00000411615 ZNF142P52746 1687 aaPredicted RBP12.73□□□□□ -0.37
LINC02539-201ENST00000411615 TMEM131LA2VDJ0 1609 aa12.73□□□□□ -0.37
LINC02539-201ENST00000411615 UGGT1Q9NYU2 1555 aa12.73□□□□□ -0.37
LINC02539-201ENST00000411615 UHRF1BP1Q6BDS2 1440 aa12.72□□□□□ -0.37
LINC02539-201ENST00000411615 SPATA31E1Q6ZUB1 1445 aa12.72□□□□□ -0.37
LINC02539-201ENST00000411615 SPDYE4A6NLX3 237 aa12.72□□□□□ -0.37
LINC02539-201ENST00000411615 STAC3Q96MF2 364 aa12.72□□□□□ -0.37
LINC02539-201ENST00000411615 ADGRB3O60242 1522 aa12.72□□□□□ -0.37
LINC02539-201ENST00000411615 RPGRIP1LQ68CZ1 1315 aa12.71□□□□□ -0.37
LINC02539-201ENST00000411615 HAX1O00165 279 aa12.71□□□□□ -0.37
LINC02539-201ENST00000411615 THEMISQ8N1K5 641 aaPredicted RBP12.71□□□□□ -0.37
LINC02539-201ENST00000411615 SIN3AQ96ST3 1273 aa12.71□□□□□ -0.37
LINC02539-201ENST00000411615 CEP170BQ9Y4F5 1589 aaPredicted RBP12.71□□□□□ -0.37
LINC02539-201ENST00000411615 UBR1Q8IWV7 1749 aa12.71□□□□□ -0.38
LINC02539-201ENST00000411615 HDGFP51858 240 aaKnown RBP12.69□□□□□ -0.38
LINC02539-201ENST00000411615 STAG3Q9UJ98 1225 aa12.69□□□□□ -0.38
LINC02539-201ENST00000411615 SLIT1O75093 1534 aa12.67□□□□□ -0.38
LINC02539-201ENST00000411615 MYO5BQ9ULV0 1848 aa12.67□□□□□ -0.38
LINC02539-201ENST00000411615 NEUROD1Q13562 356 aa12.67□□□□□ -0.38
LINC02539-201ENST00000411615 TMEM2Q9UHN6 1383 aa12.67□□□□□ -0.38
LINC02539-201ENST00000411615 ARHGAP23Q9P227 1491 aa12.66□□□□□ -0.38
LINC02539-201ENST00000411615 ZFYVE9O95405 1425 aa12.66□□□□□ -0.38
LINC02539-201ENST00000411615 PRR29P0C7W0 189 aa12.66□□□□□ -0.38
LINC02539-201ENST00000411615 CHGAP10645 457 aaKnown RBP12.66□□□□□ -0.38
LINC02539-201ENST00000411615 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.66□□□□□ -0.38
LINC02539-201ENST00000411615 LMTK3Q96Q04 1460 aa12.65□□□□□ -0.38
LINC02539-201ENST00000411615 PPLO60437 1756 aa12.64□□□□□ -0.39
LINC02539-201ENST00000411615 VGFO15240 615 aaPredicted RBP12.64□□□□□ -0.39
LINC02539-201ENST00000411615 RGL3Q3MIN7 710 aa12.64□□□□□ -0.39
LINC02539-201ENST00000411615 ZNF326Q5BKZ1 582 aaKnown RBP12.64□□□□□ -0.39
LINC02539-201ENST00000411615 L3MBTL2Q969R5 705 aa12.64□□□□□ -0.39
LINC02539-201ENST00000411615 IFT172Q9UG01 1749 aa12.64□□□□□ -0.39
LINC02539-201ENST00000411615 TONSLQ96HA7 1378 aa12.64□□□□□ -0.39
LINC02539-201ENST00000411615 RIMS2Q9UQ26 1411 aa12.63□□□□□ -0.39
LINC02539-201ENST00000411615 NEXMIFQ5QGS0 1516 aa12.63□□□□□ -0.39
LINC02539-201ENST00000411615 SP7Q8TDD2 431 aaPredicted RBP12.63□□□□□ -0.39
LINC02539-201ENST00000411615 MYOM2P54296 1465 aa12.62□□□□□ -0.39
LINC02539-201ENST00000411615 EID1Q9Y6B2 187 aa12.62□□□□□ -0.39
LINC02539-201ENST00000411615 ANKLE2Q86XL3 938 aa12.61□□□□□ -0.39
LINC02539-201ENST00000411615 NRXN1Q9ULB1 1477 aa12.6□□□□□ -0.39
LINC02539-201ENST00000411615 ZEB1P37275 1124 aaPredicted RBP12.6□□□□□ -0.39
LINC02539-201ENST00000411615 TXNDC2Q86VQ3 553 aa12.6□□□□□ -0.39
LINC02539-201ENST00000411615 DCAF11Q8TEB1 546 aa12.6□□□□□ -0.39
LINC02539-201ENST00000411615 SCAF11Q99590 1463 aaKnown RBP12.59□□□□□ -0.39
LINC02539-201ENST00000411615 MED14O60244 1454 aa12.59□□□□□ -0.39
LINC02539-201ENST00000411615 PLEKHG1Q9ULL1 1385 aa12.58□□□□□ -0.4
LINC02539-201ENST00000411615 PPP1R15AO75807 674 aaPredicted RBP12.58□□□□□ -0.4
LINC02539-201ENST00000411615 LTKP29376 864 aa12.58□□□□□ -0.4
LINC02539-201ENST00000411615 POLR1AO95602 1720 aaPredicted RBP12.57□□□□□ -0.4
LINC02539-201ENST00000411615 SETBP1Q9Y6X0 1596 aa12.56□□□□□ -0.4
LINC02539-201ENST00000411615 PIK3C2GO75747 1445 aa12.56□□□□□ -0.4
LINC02539-201ENST00000411615 KDM2AQ9Y2K7 1162 aa12.56□□□□□ -0.4
LINC02539-201ENST00000411615 ADGRF5Q8IZF2 1346 aa12.56□□□□□ -0.4
LINC02539-201ENST00000411615 PRAG1Q86YV5 1406 aa12.55□□□□□ -0.4
LINC02539-201ENST00000411615 KIAA1210Q9ULL0 1709 aa12.55□□□□□ -0.4
LINC02539-201ENST00000411615 HSPA2P54652 639 aa12.55□□□□□ -0.4
LINC02539-201ENST00000411615 STRCQ7RTU9 1775 aa12.54□□□□□ -0.4
LINC02539-201ENST00000411615 C14orf93Q9H972 538 aaKnown RBP12.54□□□□□ -0.4
LINC02539-201ENST00000411615 TBX22Q9Y458 520 aa12.54□□□□□ -0.4
LINC02539-201ENST00000411615 LAMC1P11047 1609 aa12.54□□□□□ -0.4
LINC02539-201ENST00000411615 NPHP4O75161 1426 aaPredicted RBP12.54□□□□□ -0.4
LINC02539-201ENST00000411615 DIP2AQ14689 1571 aa12.53□□□□□ -0.4
LINC02539-201ENST00000411615 NUTM2DQ5VT03 806 aaPredicted RBP12.53□□□□□ -0.4
LINC02539-201ENST00000411615 NCKAP5LQ9HCH0 1330 aa12.53□□□□□ -0.4
LINC02539-201ENST00000411615 NRXN3Q9Y4C0 1643 aa12.52□□□□□ -0.4
LINC02539-201ENST00000411615 IQGAP1P46940 1657 aa12.52□□□□□ -0.4
LINC02539-201ENST00000411615 NBPF8Q3BBV2 869 aa12.52□□□□□ -0.41
LINC02539-201ENST00000411615 ADAMTS13Q76LX8 1427 aa12.52□□□□□ -0.41
LINC02539-201ENST00000411615 ALKQ9UM73 1620 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms