RNA–Protein interactions for RNA: ENST00000410016.5

HOXD3-202, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXD3, Length 2,384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-202ENST00000410016 NEURL4Q96JN8 1562 aa21.13■□□□□ 0.97
HOXD3-202ENST00000410016 PPP2R1AP30153 589 aa21.13■□□□□ 0.97
HOXD3-202ENST00000410016 MROH1Q8NDA8 1641 aa21.12■□□□□ 0.97
HOXD3-202ENST00000410016 SYNMO15061 1565 aa21.11■□□□□ 0.97
HOXD3-202ENST00000410016 ASXL2Q76L83 1435 aa21.09■□□□□ 0.97
HOXD3-202ENST00000410016 KIAA1210Q9ULL0 1709 aa21.08■□□□□ 0.96
HOXD3-202ENST00000410016 NPC1L1Q9UHC9 1359 aa21.08■□□□□ 0.96
HOXD3-202ENST00000410016 EIF3AQ14152 1382 aaKnown RBP21.07■□□□□ 0.96
HOXD3-202ENST00000410016 CFAP70Q5T0N1 1121 aa21.07■□□□□ 0.96
HOXD3-202ENST00000410016 MYT1LQ9UL68 1186 aa21.07■□□□□ 0.96
HOXD3-202ENST00000410016 UGGT1Q9NYU2 1555 aa21.06■□□□□ 0.96
HOXD3-202ENST00000410016 ASXL1Q8IXJ9 1541 aa21.06■□□□□ 0.96
HOXD3-202ENST00000410016 ADGRF5Q8IZF2 1346 aa21.06■□□□□ 0.96
HOXD3-202ENST00000410016 MYOM2P54296 1465 aa21.06■□□□□ 0.96
HOXD3-202ENST00000410016 ERICH6Q7L0X2 663 aa21.04■□□□□ 0.96
HOXD3-202ENST00000410016 MYOM1P52179 1685 aa21.04■□□□□ 0.96
HOXD3-202ENST00000410016 MAP3K4Q9Y6R4 1608 aa21.04■□□□□ 0.96
HOXD3-202ENST00000410016 PIK3C2GO75747 1445 aa21.03■□□□□ 0.96
HOXD3-202ENST00000410016 PLIN1O60240 522 aa21.03■□□□□ 0.96
HOXD3-202ENST00000410016 EFCAB6Q5THR3 1501 aa21.03■□□□□ 0.96
HOXD3-202ENST00000410016 PLEKHH1Q9ULM0 1364 aa21.03■□□□□ 0.96
HOXD3-202ENST00000410016 ZNF521Q96K83 1311 aa21.03■□□□□ 0.96
HOXD3-202ENST00000410016 KIDINS220Q9ULH0 1771 aa21.02■□□□□ 0.96
HOXD3-202ENST00000410016 SLC24A1O60721 1099 aa21.02■□□□□ 0.96
HOXD3-202ENST00000410016 WDR43Q15061 677 aaKnown RBP eCLIP21.01■□□□□ 0.95
HOXD3-202ENST00000410016 LMTK2Q8IWU2 1503 aa21.01■□□□□ 0.95
HOXD3-202ENST00000410016 ERVK-7P63135 1459 aa21■□□□□ 0.95
HOXD3-202ENST00000410016 NRXN1Q9ULB1 1477 aa21■□□□□ 0.95
HOXD3-202ENST00000410016 PRKCSHP14314 528 aaPredicted RBP21■□□□□ 0.95
HOXD3-202ENST00000410016 ABCA6Q8N139 1617 aa21■□□□□ 0.95
HOXD3-202ENST00000410016 DUSP27Q5VZP5 1158 aa20.99■□□□□ 0.95
HOXD3-202ENST00000410016 ZNF518AQ6AHZ1 1483 aa20.98■□□□□ 0.95
HOXD3-202ENST00000410016 PPRC1Q5VV67 1664 aaKnown RBP20.98■□□□□ 0.95
HOXD3-202ENST00000410016 TCERG1O14776 1098 aaKnown RBP20.97■□□□□ 0.95
HOXD3-202ENST00000410016 CARD14Q9BXL6 1004 aa20.97■□□□□ 0.95
HOXD3-202ENST00000410016 NOP58Q9Y2X3 529 aaKnown RBP20.97■□□□□ 0.95
HOXD3-202ENST00000410016 KDM5AP29375 1690 aaKnown RBP20.97■□□□□ 0.95
HOXD3-202ENST00000410016 IFT172Q9UG01 1749 aa20.96■□□□□ 0.95
HOXD3-202ENST00000410016 CRBNQ96SW2 442 aa20.96■□□□□ 0.95
HOXD3-202ENST00000410016 KIF1BO60333 1816 aa20.96■□□□□ 0.95
HOXD3-202ENST00000410016 PAK3O75914 559 aaPredicted RBP20.95■□□□□ 0.94
HOXD3-202ENST00000410016 SBNO2Q9Y2G9 1366 aa20.95■□□□□ 0.94
HOXD3-202ENST00000410016 GOLGA2Q08379 1002 aa20.94■□□□□ 0.94
HOXD3-202ENST00000410016 IPO9Q96P70 1041 aaKnown RBP20.94■□□□□ 0.94
HOXD3-202ENST00000410016 MROH2AA6NES4 1674 aa20.93■□□□□ 0.94
HOXD3-202ENST00000410016 C20orf194Q5TEA3 1177 aa20.93■□□□□ 0.94
HOXD3-202ENST00000410016 ANP32AP39687 249 aaKnown RBP20.92■□□□□ 0.94
HOXD3-202ENST00000410016 ADGRB3O60242 1522 aa20.92■□□□□ 0.94
HOXD3-202ENST00000410016 NOS1P29475 1434 aa20.92■□□□□ 0.94
HOXD3-202ENST00000410016 TRMT2AQ8IZ69 625 aaKnown RBP20.92■□□□□ 0.94
HOXD3-202ENST00000410016 NPATQ14207 1427 aa20.91■□□□□ 0.94
HOXD3-202ENST00000410016 MS4A1P11836 297 aa20.9■□□□□ 0.94
HOXD3-202ENST00000410016 SLFN5Q08AF3 891 aa20.9■□□□□ 0.94
HOXD3-202ENST00000410016 MLH3Q9UHC1 1453 aa20.9■□□□□ 0.94
HOXD3-202ENST00000410016 POGZQ7Z3K3 1410 aa20.9■□□□□ 0.94
HOXD3-202ENST00000410016 MYO3AQ8NEV4 1616 aa20.9■□□□□ 0.94
HOXD3-202ENST00000410016 FRMPD1Q5SYB0 1578 aa20.89■□□□□ 0.94
HOXD3-202ENST00000410016 CD109Q6YHK3 1445 aa20.89■□□□□ 0.94
HOXD3-202ENST00000410016 NPM1P06748 294 aaKnown RBP eCLIP20.89■□□□□ 0.93
HOXD3-202ENST00000410016 PDE4AP27815 886 aa20.89■□□□□ 0.93
HOXD3-202ENST00000410016 CCDC146Q8IYE0 955 aa20.88■□□□□ 0.93
HOXD3-202ENST00000410016 C14orf93Q9H972 538 aaKnown RBP20.88■□□□□ 0.93
HOXD3-202ENST00000410016 SETBP1Q9Y6X0 1596 aa20.88■□□□□ 0.93
HOXD3-202ENST00000410016 BACH2Q9BYV9 841 aa20.88■□□□□ 0.93
HOXD3-202ENST00000410016 CENPJQ9HC77 1338 aaPredicted RBP20.88■□□□□ 0.93
HOXD3-202ENST00000410016 APAF1O14727 1248 aa20.87■□□□□ 0.93
HOXD3-202ENST00000410016 GGT6Q6P531 493 aa20.86■□□□□ 0.93
HOXD3-202ENST00000410016 SPINK5Q9NQ38 1064 aaPredicted RBP20.86■□□□□ 0.93
HOXD3-202ENST00000410016 CHGAP10645 457 aaKnown RBP20.86■□□□□ 0.93
HOXD3-202ENST00000410016 TRAK1Q9UPV9 953 aa20.84■□□□□ 0.93
HOXD3-202ENST00000410016 KDM2BQ8NHM5 1336 aa20.84■□□□□ 0.93
HOXD3-202ENST00000410016 ADGRB1O14514 1584 aa20.83■□□□□ 0.93
HOXD3-202ENST00000410016 OSCARQ8IYS5 282 aa20.83■□□□□ 0.93
HOXD3-202ENST00000410016 RPGRIP1LQ68CZ1 1315 aa20.82■□□□□ 0.92
HOXD3-202ENST00000410016 POLR3AO14802 1390 aaPredicted RBP20.82■□□□□ 0.92
HOXD3-202ENST00000410016 ZBTB47Q9UFB7 747 aaPredicted RBP20.81■□□□□ 0.92
HOXD3-202ENST00000410016 SKAP1Q86WV1 359 aa20.81■□□□□ 0.92
HOXD3-202ENST00000410016 CFAP74Q9C0B2 1584 aa20.81■□□□□ 0.92
HOXD3-202ENST00000410016 PPLO60437 1756 aa20.8■□□□□ 0.92
HOXD3-202ENST00000410016 HECW2Q9P2P5 1572 aa20.8■□□□□ 0.92
HOXD3-202ENST00000410016 TMEM132EQ6IEE7 984 aa20.8■□□□□ 0.92
HOXD3-202ENST00000410016 NGEFQ8N5V2 710 aa20.8■□□□□ 0.92
HOXD3-202ENST00000410016 SLC12A5Q9H2X9 1139 aa20.8■□□□□ 0.92
HOXD3-202ENST00000410016 ABCC3O15438 1527 aa20.79■□□□□ 0.92
HOXD3-202ENST00000410016 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.79■□□□□ 0.92
HOXD3-202ENST00000410016 DMRT2Q9Y5R5 561 aa20.79■□□□□ 0.92
HOXD3-202ENST00000410016 NKTRP30414 1462 aaKnown RBP20.78■□□□□ 0.92
HOXD3-202ENST00000410016 E9PSI1 815 aa20.78■□□□□ 0.92
HOXD3-202ENST00000410016 NSD3Q9BZ95 1437 aa20.77■□□□□ 0.92
HOXD3-202ENST00000410016 CFAP65Q6ZU64 1925 aaKnown RBP20.77■□□□□ 0.92
HOXD3-202ENST00000410016 CENPQQ7L2Z9 268 aaPredicted RBP20.76■□□□□ 0.91
HOXD3-202ENST00000410016 RAPGEF3O95398 923 aa20.75■□□□□ 0.91
HOXD3-202ENST00000410016 ZC3H13Q5T200 1668 aaKnown RBP20.75■□□□□ 0.91
HOXD3-202ENST00000410016 NPM2Q86SE8 214 aaKnown RBP20.74■□□□□ 0.91
HOXD3-202ENST00000410016 MORC1Q86VD1 984 aa20.74■□□□□ 0.91
HOXD3-202ENST00000410016 BCAR3O75815 825 aa20.73■□□□□ 0.91
HOXD3-202ENST00000410016 QRICH2Q9H0J4 1663 aa20.73■□□□□ 0.91
HOXD3-202ENST00000410016 WWC1Q8IX03 1113 aa20.73■□□□□ 0.91
HOXD3-202ENST00000410016 PUS7Q96PZ0 661 aaKnown RBP20.72■□□□□ 0.91
HOXD3-202ENST00000410016 NEO1Q92859 1461 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 1246.5 ms