RNA–Protein interactions for RNA: ENST00000409782.5

LSM5-203, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 649 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-203ENST00000409782 RSPH6AQ9H0K4 717 aa10.89□□□□□ -0.67
LSM5-203ENST00000409782 HRO43593 1189 aa10.88□□□□□ -0.67
LSM5-203ENST00000409782 IL27Q8NEV9 243 aa10.88□□□□□ -0.67
LSM5-203ENST00000409782 TOP2AP11388 1531 aaKnown RBP10.88□□□□□ -0.67
LSM5-203ENST00000409782 CUX2O14529 1486 aa10.87□□□□□ -0.67
LSM5-203ENST00000409782 NBPF26B4DH59 902 aa10.87□□□□□ -0.67
LSM5-203ENST00000409782 MRPL50Q8N5N7 158 aaKnown RBP10.87□□□□□ -0.67
LSM5-203ENST00000409782 TTC13Q8NBP0 860 aa10.87□□□□□ -0.67
LSM5-203ENST00000409782 MINK1Q8N4C8 1332 aaPredicted RBP10.85□□□□□ -0.67
LSM5-203ENST00000409782 BHMG1C9JSJ3 638 aaPredicted RBP10.85□□□□□ -0.67
LSM5-203ENST00000409782 FAM198AQ9UFP1 575 aa10.85□□□□□ -0.67
LSM5-203ENST00000409782 FECHP22830 423 aa10.84□□□□□ -0.67
LSM5-203ENST00000409782 LAPTM4BQ86VI4 370 aa10.84□□□□□ -0.67
LSM5-203ENST00000409782 TATDN2Q93075 761 aa10.84□□□□□ -0.67
LSM5-203ENST00000409782 PNMA3Q9UL41 463 aa10.84□□□□□ -0.67
LSM5-203ENST00000409782 GOLGA8CPA6NN73 597 aa10.83□□□□□ -0.68
LSM5-203ENST00000409782 NUDT18Q6ZVK8 323 aa10.83□□□□□ -0.68
LSM5-203ENST00000409782 SPNS2Q8IVW8 549 aa10.83□□□□□ -0.68
LSM5-203ENST00000409782 DDRGK1Q96HY6 314 aa10.83□□□□□ -0.68
LSM5-203ENST00000409782 CADPSQ9ULU8 1353 aa10.82□□□□□ -0.68
LSM5-203ENST00000409782 OATP04181 439 aa10.82□□□□□ -0.68
LSM5-203ENST00000409782 MAP2K5Q13163 448 aa10.82□□□□□ -0.68
LSM5-203ENST00000409782 RBM46Q8TBY0 533 aaKnown RBP10.82□□□□□ -0.68
LSM5-203ENST00000409782 SEPT9Q9UHD8 586 aaPredicted RBP10.82□□□□□ -0.68
LSM5-203ENST00000409782 PDS5BQ9NTI5 1447 aa10.82□□□□□ -0.68
LSM5-203ENST00000409782 AMHR2Q16671 573 aa10.81□□□□□ -0.68
LSM5-203ENST00000409782 FAM98CQ17RN3 349 aaKnown RBP10.81□□□□□ -0.68
LSM5-203ENST00000409782 MYT1LQ9UL68 1186 aa10.81□□□□□ -0.68
LSM5-203ENST00000409782 ADGRG1Q9Y653 693 aa10.81□□□□□ -0.68
LSM5-203ENST00000409782 THOC2Q8NI27 1593 aaKnown RBP10.81□□□□□ -0.68
LSM5-203ENST00000409782 SMAPO00193 183 aa10.8□□□□□ -0.68
LSM5-203ENST00000409782 IRF6O14896 467 aa10.78□□□□□ -0.68
LSM5-203ENST00000409782 HDGFP51858 240 aaKnown RBP10.78□□□□□ -0.68
LSM5-203ENST00000409782 FAM161AQ3B820 660 aa10.78□□□□□ -0.68
LSM5-203ENST00000409782 GOPCQ9HD26 462 aa10.78□□□□□ -0.68
LSM5-203ENST00000409782 KIF21AQ7Z4S6 1674 aa10.78□□□□□ -0.68
LSM5-203ENST00000409782 EYA1Q99502 592 aa10.77□□□□□ -0.69
LSM5-203ENST00000409782 CFTRP13569 1480 aa10.76□□□□□ -0.69
LSM5-203ENST00000409782 C3orf80F5H4A9 247 aa10.76□□□□□ -0.69
LSM5-203ENST00000409782 FLIIQ13045 1269 aa10.76□□□□□ -0.69
LSM5-203ENST00000409782 ZFRQ96KR1 1074 aaKnown RBP10.76□□□□□ -0.69
LSM5-203ENST00000409782 FAM117AQ9C073 453 aa10.76□□□□□ -0.69
LSM5-203ENST00000409782 ANKK1Q8NFD2 765 aa10.75□□□□□ -0.69
LSM5-203ENST00000409782 WNT2BQ93097 391 aa10.75□□□□□ -0.69
LSM5-203ENST00000409782 CCDC102AQ96A19 550 aa10.75□□□□□ -0.69
LSM5-203ENST00000409782 PLEKHG3A1L390 1219 aa10.74□□□□□ -0.69
LSM5-203ENST00000409782 METTL3Q86U44 580 aaKnown RBP10.74□□□□□ -0.69
LSM5-203ENST00000409782 PXYLP1Q8TE99 480 aa10.74□□□□□ -0.69
LSM5-203ENST00000409782 MRC2Q9UBG0 1479 aa10.74□□□□□ -0.69
LSM5-203ENST00000409782 DNAJB2P25686 324 aa10.73□□□□□ -0.69
LSM5-203ENST00000409782 KCTD12Q96CX2 325 aaKnown RBP10.73□□□□□ -0.69
LSM5-203ENST00000409782 CEP164Q9UPV0 1460 aa10.73□□□□□ -0.69
LSM5-203ENST00000409782 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.72□□□□□ -0.69
LSM5-203ENST00000409782 UBTFP17480 764 aaKnown RBP10.72□□□□□ -0.69
LSM5-203ENST00000409782 SLC4A3P48751 1232 aa10.72□□□□□ -0.69
LSM5-203ENST00000409782 MMRN1Q13201 1228 aa10.72□□□□□ -0.69
LSM5-203ENST00000409782 PARP9Q8IXQ6 854 aa10.72□□□□□ -0.69
LSM5-203ENST00000409782 RNF166Q96A37 237 aaPredicted RBP10.72□□□□□ -0.69
LSM5-203ENST00000409782 WDR62O43379 1518 aa10.72□□□□□ -0.69
LSM5-203ENST00000409782 RCCD1A6NED2 376 aa10.71□□□□□ -0.69
LSM5-203ENST00000409782 LRCH3Q96II8 777 aa10.71□□□□□ -0.69
LSM5-203ENST00000409782 FANCD2Q9BXW9 1451 aa10.71□□□□□ -0.69
LSM5-203ENST00000409782 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.7□□□□□ -0.7
LSM5-203ENST00000409782 CCDC88BA6NC98 1476 aa10.69□□□□□ -0.7
LSM5-203ENST00000409782 SAMD7Q7Z3H4 446 aa10.69□□□□□ -0.7
LSM5-203ENST00000409782 PRDM2Q13029 1718 aa10.69□□□□□ -0.7
LSM5-203ENST00000409782 TMEM134Q9H6X4 195 aa10.68□□□□□ -0.7
LSM5-203ENST00000409782 SOWAHBA6NEL2 793 aa10.67□□□□□ -0.7
LSM5-203ENST00000409782 PODXL2Q9NZ53 605 aa10.67□□□□□ -0.7
LSM5-203ENST00000409782 SWT1Q5T5J6 900 aaKnown RBP10.66□□□□□ -0.7
LSM5-203ENST00000409782 THSD4Q6ZMP0 1018 aa10.66□□□□□ -0.7
LSM5-203ENST00000409782 RNF40O75150 1001 aa10.65□□□□□ -0.7
LSM5-203ENST00000409782 BCAMP50895 628 aa10.65□□□□□ -0.7
LSM5-203ENST00000409782 SLF2Q8IX21 1173 aa10.65□□□□□ -0.7
LSM5-203ENST00000409782 PHOX2BQ99453 314 aa10.65□□□□□ -0.7
LSM5-203ENST00000409782 NECTIN2Q92692 538 aa10.64□□□□□ -0.71
LSM5-203ENST00000409782 PTPN5P54829 565 aa10.63□□□□□ -0.71
LSM5-203ENST00000409782 RSPH4AQ5TD94 716 aa10.63□□□□□ -0.71
LSM5-203ENST00000409782 NLRP7Q8WX94 980 aa10.63□□□□□ -0.71
LSM5-203ENST00000409782 C1orf115Q9H7X2 142 aa10.63□□□□□ -0.71
LSM5-203ENST00000409782 HCSTQ9UBK5 93 aa10.63□□□□□ -0.71
LSM5-203ENST00000409782 A6NJR5 290 aa10.62□□□□□ -0.71
LSM5-203ENST00000409782 CLCN1P35523 988 aa10.62□□□□□ -0.71
LSM5-203ENST00000409782 MDM2Q00987 491 aaPredicted RBP10.62□□□□□ -0.71
LSM5-203ENST00000409782 TSR3Q9UJK0 312 aaKnown RBP10.62□□□□□ -0.71
LSM5-203ENST00000409782 HPS5Q9UPZ3 1129 aa10.62□□□□□ -0.71
LSM5-203ENST00000409782 PPP4CP60510 307 aa10.61□□□□□ -0.71
LSM5-203ENST00000409782 URB2Q14146 1524 aaKnown RBP10.61□□□□□ -0.71
LSM5-203ENST00000409782 TTLL12Q14166 644 aaPredicted RBP10.6□□□□□ -0.71
LSM5-203ENST00000409782 SULF1Q8IWU6 871 aa10.6□□□□□ -0.71
LSM5-203ENST00000409782 GPCPD1Q9NPB8 672 aa10.59□□□□□ -0.71
LSM5-203ENST00000409782 NYAP1Q6ZVC0 841 aa10.58□□□□□ -0.72
LSM5-203ENST00000409782 WBP1LQ9NX94 342 aa10.58□□□□□ -0.72
LSM5-203ENST00000409782 DDX11L8A8MPP1 907 aa10.57□□□□□ -0.72
LSM5-203ENST00000409782 GIGYF2Q6Y7W6 1299 aaKnown RBP10.57□□□□□ -0.72
LSM5-203ENST00000409782 PCMTD1Q96MG8 357 aaPredicted RBP10.57□□□□□ -0.72
LSM5-203ENST00000409782 SH3D19Q5HYK7 790 aa10.56□□□□□ -0.72
LSM5-203ENST00000409782 RDH13Q8NBN7 331 aa10.56□□□□□ -0.72
LSM5-203ENST00000409782 TMUB1Q9BVT8 246 aa10.55□□□□□ -0.72
LSM5-203ENST00000409782 APBB1O00213 710 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms