RNA–Protein interactions for RNA: ENST00000409700.4

PCDHAC1-202, Transcript of protocadherin alpha subfamily C, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHAC1, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC1-202ENST00000409700 PARD3Q8TEW0 1356 aa13.81□□□□□ -0.2
PCDHAC1-202ENST00000409700 LRPPRCP42704 1394 aaKnown RBP13.81□□□□□ -0.2
PCDHAC1-202ENST00000409700 PER1O15534 1290 aaPredicted RBP13.8□□□□□ -0.2
PCDHAC1-202ENST00000409700 FRAT2O75474 233 aaPredicted RBP13.8□□□□□ -0.2
PCDHAC1-202ENST00000409700 DUSP27Q5VZP5 1158 aa13.8□□□□□ -0.2
PCDHAC1-202ENST00000409700 HSCBQ8IWL3 235 aa13.79□□□□□ -0.2
PCDHAC1-202ENST00000409700 BRPF3Q9ULD4 1205 aa13.79□□□□□ -0.2
PCDHAC1-202ENST00000409700 SLFN5Q08AF3 891 aa13.79□□□□□ -0.2
PCDHAC1-202ENST00000409700 ATP10BO94823 1461 aa13.79□□□□□ -0.2
PCDHAC1-202ENST00000409700 ITSN2Q9NZM3 1697 aa13.78□□□□□ -0.2
PCDHAC1-202ENST00000409700 STAC3Q96MF2 364 aa13.78□□□□□ -0.2
PCDHAC1-202ENST00000409700 TESK2Q96S53 571 aa13.78□□□□□ -0.2
PCDHAC1-202ENST00000409700 PRAG1Q86YV5 1406 aa13.78□□□□□ -0.2
PCDHAC1-202ENST00000409700 ESF1Q9H501 851 aaKnown RBP13.77□□□□□ -0.2
PCDHAC1-202ENST00000409700 UHRF1BP1Q6BDS2 1440 aa13.77□□□□□ -0.2
PCDHAC1-202ENST00000409700 L1TD1Q5T7N2 865 aaKnown RBP13.77□□□□□ -0.21
PCDHAC1-202ENST00000409700 NGEFQ8N5V2 710 aa13.77□□□□□ -0.21
PCDHAC1-202ENST00000409700 HSP90AB1P08238 724 aaKnown RBP13.77□□□□□ -0.21
PCDHAC1-202ENST00000409700 PLEKHH2Q8IVE3 1493 aa13.77□□□□□ -0.21
PCDHAC1-202ENST00000409700 TCP11L2Q8N4U5 519 aa13.76□□□□□ -0.21
PCDHAC1-202ENST00000409700 RUNDC1Q96C34 613 aa13.76□□□□□ -0.21
PCDHAC1-202ENST00000409700 TRIM44Q96DX7 344 aaPredicted RBP13.76□□□□□ -0.21
PCDHAC1-202ENST00000409700 PBRM1Q86U86 1689 aa13.76□□□□□ -0.21
PCDHAC1-202ENST00000409700 TMEM132EQ6IEE7 984 aa13.75□□□□□ -0.21
PCDHAC1-202ENST00000409700 MTHFSP49914 203 aa13.75□□□□□ -0.21
PCDHAC1-202ENST00000409700 ZKSCAN2Q63HK3 967 aa13.75□□□□□ -0.21
PCDHAC1-202ENST00000409700 TARBP1Q13395 1621 aaKnown RBP13.74□□□□□ -0.21
PCDHAC1-202ENST00000409700 SLC12A5Q9H2X9 1139 aa13.74□□□□□ -0.21
PCDHAC1-202ENST00000409700 ADGRL2O95490 1459 aa13.74□□□□□ -0.21
PCDHAC1-202ENST00000409700 ARHGEF12Q9NZN5 1544 aa13.74□□□□□ -0.21
PCDHAC1-202ENST00000409700 IPO8O15397 1037 aaKnown RBP13.74□□□□□ -0.21
PCDHAC1-202ENST00000409700 PDE3AQ14432 1141 aa13.74□□□□□ -0.21
PCDHAC1-202ENST00000409700 MLECQ14165 292 aa13.73□□□□□ -0.21
PCDHAC1-202ENST00000409700 PNNQ9H307 717 aaKnown RBP13.73□□□□□ -0.21
PCDHAC1-202ENST00000409700 GOLGA6L22H0YM25 854 aa13.72□□□□□ -0.21
PCDHAC1-202ENST00000409700 FAM135AQ9P2D6 1515 aa13.72□□□□□ -0.21
PCDHAC1-202ENST00000409700 NAP1L5Q96NT1 182 aaPredicted RBP13.72□□□□□ -0.21
PCDHAC1-202ENST00000409700 ANO8Q9HCE9 1232 aaPredicted RBP13.72□□□□□ -0.21
PCDHAC1-202ENST00000409700 LRRIQ1Q96JM4 1722 aa13.72□□□□□ -0.21
PCDHAC1-202ENST00000409700 NCLP19338 710 aaKnown RBP13.72□□□□□ -0.21
PCDHAC1-202ENST00000409700 CYB5RLQ6IPT4 315 aa13.72□□□□□ -0.21
PCDHAC1-202ENST00000409700 AMER1Q5JTC6 1135 aaPredicted RBP13.71□□□□□ -0.21
PCDHAC1-202ENST00000409700 DZIP1LQ8IYY4 767 aaKnown RBP13.71□□□□□ -0.21
PCDHAC1-202ENST00000409700 OSCARQ8IYS5 282 aa13.7□□□□□ -0.22
PCDHAC1-202ENST00000409700 WWC1Q8IX03 1113 aa13.7□□□□□ -0.22
PCDHAC1-202ENST00000409700 GOLGA6L3A6NEY3 463 aa13.69□□□□□ -0.22
PCDHAC1-202ENST00000409700 HDGFL2Q7Z4V5 671 aaPredicted RBP13.69□□□□□ -0.22
PCDHAC1-202ENST00000409700 PLEKHH1Q9ULM0 1364 aa13.69□□□□□ -0.22
PCDHAC1-202ENST00000409700 EVC2Q86UK5 1308 aa13.69□□□□□ -0.22
PCDHAC1-202ENST00000409700 PDZRN3Q9UPQ7 1066 aa13.69□□□□□ -0.22
PCDHAC1-202ENST00000409700 KDM5CP41229 1560 aa13.69□□□□□ -0.22
PCDHAC1-202ENST00000409700 CHMP4BQ9H444 224 aaKnown RBP13.68□□□□□ -0.22
PCDHAC1-202ENST00000409700 TERF2IPQ9NYB0 399 aa13.68□□□□□ -0.22
PCDHAC1-202ENST00000409700 SHANK2Q9UPX8 1470 aa13.68□□□□□ -0.22
PCDHAC1-202ENST00000409700 FOXD4L1Q9NU39 408 aa13.67□□□□□ -0.22
PCDHAC1-202ENST00000409700 ELL2O00472 640 aaPredicted RBP13.67□□□□□ -0.22
PCDHAC1-202ENST00000409700 GGNBP2Q9H3C7 697 aa13.67□□□□□ -0.22
PCDHAC1-202ENST00000409700 CABP2Q9NPB3 220 aa13.67□□□□□ -0.22
PCDHAC1-202ENST00000409700 SCAPERQ9BY12 1400 aa13.66□□□□□ -0.22
PCDHAC1-202ENST00000409700 IGHDP01880 384 aa13.66□□□□□ -0.22
PCDHAC1-202ENST00000409700 NKTRP30414 1462 aaKnown RBP13.66□□□□□ -0.22
PCDHAC1-202ENST00000409700 BCORL1Q5H9F3 1711 aa13.66□□□□□ -0.22
PCDHAC1-202ENST00000409700 SYCP2Q9BX26 1530 aa13.66□□□□□ -0.22
PCDHAC1-202ENST00000409700 APBB1O00213 710 aa13.66□□□□□ -0.22
PCDHAC1-202ENST00000409700 VGFO15240 615 aaPredicted RBP13.66□□□□□ -0.22
PCDHAC1-202ENST00000409700 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.66□□□□□ -0.22
PCDHAC1-202ENST00000409700 TSR2Q969E8 191 aaKnown RBP13.66□□□□□ -0.22
PCDHAC1-202ENST00000409700 MINK1Q8N4C8 1332 aaPredicted RBP13.65□□□□□ -0.22
PCDHAC1-202ENST00000409700 COL17A1Q9UMD9 1497 aaPredicted RBP13.65□□□□□ -0.22
PCDHAC1-202ENST00000409700 C8orf34Q49A92 452 aa13.65□□□□□ -0.22
PCDHAC1-202ENST00000409700 DDX19BQ9UMR2 479 aa13.65□□□□□ -0.22
PCDHAC1-202ENST00000409700 A2MP01023 1474 aa13.65□□□□□ -0.22
PCDHAC1-202ENST00000409700 MBD5Q9P267 1494 aa13.65□□□□□ -0.22
PCDHAC1-202ENST00000409700 RIPK4P57078 832 aa13.65□□□□□ -0.22
PCDHAC1-202ENST00000409700 ADGRF5Q8IZF2 1346 aa13.65□□□□□ -0.22
PCDHAC1-202ENST00000409700 C22orf23Q9BZE7 217 aa13.64□□□□□ -0.23
PCDHAC1-202ENST00000409700 SPINK5Q9NQ38 1064 aaPredicted RBP13.64□□□□□ -0.23
PCDHAC1-202ENST00000409700 SCAF11Q99590 1463 aaKnown RBP13.64□□□□□ -0.23
PCDHAC1-202ENST00000409700 EIF4G3O43432 1585 aaKnown RBP13.63□□□□□ -0.23
PCDHAC1-202ENST00000409700 ADGBQ8N7X0 1667 aa13.63□□□□□ -0.23
PCDHAC1-202ENST00000409700 EXOSC9Q06265 439 aaKnown RBP13.63□□□□□ -0.23
PCDHAC1-202ENST00000409700 ANKRD45Q5TZF3 282 aa13.63□□□□□ -0.23
PCDHAC1-202ENST00000409700 AAMPQ13685 434 aa13.63□□□□□ -0.23
PCDHAC1-202ENST00000409700 GLIPR1L2Q4G1C9 344 aa13.63□□□□□ -0.23
PCDHAC1-202ENST00000409700 GBP4Q96PP9 640 aa13.63□□□□□ -0.23
PCDHAC1-202ENST00000409700 LNPKQ9C0E8 428 aa13.63□□□□□ -0.23
PCDHAC1-202ENST00000409700 RARSP54136 660 aaKnown RBP13.63□□□□□ -0.23
PCDHAC1-202ENST00000409700 CASC1Q6TDU7 716 aa13.62□□□□□ -0.23
PCDHAC1-202ENST00000409700 SOX12O15370 315 aa13.62□□□□□ -0.23
PCDHAC1-202ENST00000409700 NSD3Q9BZ95 1437 aa13.62□□□□□ -0.23
PCDHAC1-202ENST00000409700 WDR63Q8IWG1 891 aa13.61□□□□□ -0.23
PCDHAC1-202ENST00000409700 CHMP5Q9NZZ3 219 aa13.61□□□□□ -0.23
PCDHAC1-202ENST00000409700 DIAPH1O60610 1272 aaKnown RBP13.6□□□□□ -0.23
PCDHAC1-202ENST00000409700 NUP160Q12769 1436 aa13.6□□□□□ -0.23
PCDHAC1-202ENST00000409700 GPRASP1Q5JY77 1395 aa13.6□□□□□ -0.23
PCDHAC1-202ENST00000409700 NINLQ9Y2I6 1382 aa13.6□□□□□ -0.23
PCDHAC1-202ENST00000409700 KDM2BQ8NHM5 1336 aa13.59□□□□□ -0.23
PCDHAC1-202ENST00000409700 CALD1Q05682 793 aaKnown RBP13.59□□□□□ -0.23
PCDHAC1-202ENST00000409700 MVPQ14764 893 aaKnown RBP13.59□□□□□ -0.23
PCDHAC1-202ENST00000409700 BLMP54132 1417 aaPredicted RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms