RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 KIF7Q2M1P5 1343 aa21.05■□□□□ 0.96
PCDHA13-202ENST00000409494 TTC5Q8N0Z6 440 aa21.05■□□□□ 0.96
PCDHA13-202ENST00000409494 THOC2Q8NI27 1593 aaKnown RBP21.05■□□□□ 0.96
PCDHA13-202ENST00000409494 RUNDC1Q96C34 613 aa21.04■□□□□ 0.96
PCDHA13-202ENST00000409494 GORABQ5T7V8 394 aa21.04■□□□□ 0.96
PCDHA13-202ENST00000409494 PROSER2Q86WR7 435 aaPredicted RBP21.04■□□□□ 0.96
PCDHA13-202ENST00000409494 CAMSAP2Q08AD1 1489 aa21.02■□□□□ 0.96
PCDHA13-202ENST00000409494 IPO9Q96P70 1041 aaKnown RBP21.02■□□□□ 0.96
PCDHA13-202ENST00000409494 RAPGEF4Q8WZA2 1011 aa21.02■□□□□ 0.96
PCDHA13-202ENST00000409494 DENND4BO75064 1496 aaPredicted RBP21.01■□□□□ 0.95
PCDHA13-202ENST00000409494 ZKSCAN2Q63HK3 967 aa21.01■□□□□ 0.95
PCDHA13-202ENST00000409494 NEXNQ0ZGT2 675 aa21■□□□□ 0.95
PCDHA13-202ENST00000409494 NAIPQ13075 1403 aa21■□□□□ 0.95
PCDHA13-202ENST00000409494 RTN4Q9NQC3 1192 aaKnown RBP21■□□□□ 0.95
PCDHA13-202ENST00000409494 BRD4O60885 1362 aaPredicted RBP21■□□□□ 0.95
PCDHA13-202ENST00000409494 API5Q9BZZ5 524 aaKnown RBP21■□□□□ 0.95
PCDHA13-202ENST00000409494 GNAI1P63096 354 aa21■□□□□ 0.95
PCDHA13-202ENST00000409494 AAMPQ13685 434 aa21■□□□□ 0.95
PCDHA13-202ENST00000409494 TMEM132EQ6IEE7 984 aa20.99■□□□□ 0.95
PCDHA13-202ENST00000409494 GTF2E1P29083 439 aaPredicted RBP20.99■□□□□ 0.95
PCDHA13-202ENST00000409494 DDX58O95786 925 aaKnown RBP20.99■□□□□ 0.95
PCDHA13-202ENST00000409494 ATAD2Q6PL18 1390 aa20.98■□□□□ 0.95
PCDHA13-202ENST00000409494 SLC4A10Q6U841 1118 aa20.98■□□□□ 0.95
PCDHA13-202ENST00000409494 AKNAQ7Z591 1439 aa20.98■□□□□ 0.95
PCDHA13-202ENST00000409494 NLRP6P59044 892 aa20.98■□□□□ 0.95
PCDHA13-202ENST00000409494 ERBINQ96RT1 1412 aa20.97■□□□□ 0.95
PCDHA13-202ENST00000409494 PTPN23Q9H3S7 1636 aa20.96■□□□□ 0.95
PCDHA13-202ENST00000409494 APAF1O14727 1248 aa20.95■□□□□ 0.94
PCDHA13-202ENST00000409494 PRAM1Q96QH2 718 aa20.95■□□□□ 0.94
PCDHA13-202ENST00000409494 CABP2Q9NPB3 220 aa20.95■□□□□ 0.94
PCDHA13-202ENST00000409494 RIPK4P57078 832 aa20.94■□□□□ 0.94
PCDHA13-202ENST00000409494 TEX14Q8IWB6 1497 aa20.94■□□□□ 0.94
PCDHA13-202ENST00000409494 ABCC5O15440 1437 aa20.94■□□□□ 0.94
PCDHA13-202ENST00000409494 CHMP3Q9Y3E7 222 aa20.94■□□□□ 0.94
PCDHA13-202ENST00000409494 PTMSP20962 102 aa20.94■□□□□ 0.94
PCDHA13-202ENST00000409494 LRRFIP1Q32MZ4 808 aaKnown RBP20.93■□□□□ 0.94
PCDHA13-202ENST00000409494 GOLGA6L4A6NEF3 574 aa20.93■□□□□ 0.94
PCDHA13-202ENST00000409494 CHMP4CQ96CF2 233 aa20.93■□□□□ 0.94
PCDHA13-202ENST00000409494 NAP1L2Q9ULW6 460 aaPredicted RBP20.93■□□□□ 0.94
PCDHA13-202ENST00000409494 FANCAO15360 1455 aa20.92■□□□□ 0.94
PCDHA13-202ENST00000409494 GAS2L2Q8NHY3 880 aa20.92■□□□□ 0.94
PCDHA13-202ENST00000409494 RRP7AQ9Y3A4 280 aaKnown RBP20.92■□□□□ 0.94
PCDHA13-202ENST00000409494 KIF16BQ96L93 1317 aa20.91■□□□□ 0.94
PCDHA13-202ENST00000409494 FANCIQ9NVI1 1328 aa20.91■□□□□ 0.94
PCDHA13-202ENST00000409494 MEX3CQ5U5Q3 659 aaKnown RBP20.9■□□□□ 0.94
PCDHA13-202ENST00000409494 HMGB2P26583 209 aaKnown RBP20.9■□□□□ 0.94
PCDHA13-202ENST00000409494 DDX19BQ9UMR2 479 aa20.9■□□□□ 0.94
PCDHA13-202ENST00000409494 APBB1O00213 710 aa20.9■□□□□ 0.94
PCDHA13-202ENST00000409494 RTEL1-TNFRSF6BF6WH68 1400 aa20.9■□□□□ 0.94
PCDHA13-202ENST00000409494 NCOA1Q15788 1441 aa20.89■□□□□ 0.94
PCDHA13-202ENST00000409494 GGNBP2Q9H3C7 697 aa20.89■□□□□ 0.94
PCDHA13-202ENST00000409494 HTATSF1O43719 755 aaKnown RBP20.89■□□□□ 0.93
PCDHA13-202ENST00000409494 CLUAP1Q96AJ1 413 aa20.89■□□□□ 0.93
PCDHA13-202ENST00000409494 SMG6Q86US8 1419 aaKnown RBP20.89■□□□□ 0.93
PCDHA13-202ENST00000409494 ABTB2Q8N961 1025 aa20.88■□□□□ 0.93
PCDHA13-202ENST00000409494 DHX29Q7Z478 1369 aaKnown RBP20.88■□□□□ 0.93
PCDHA13-202ENST00000409494 ESCO1Q5FWF5 840 aa20.88■□□□□ 0.93
PCDHA13-202ENST00000409494 CENPQQ7L2Z9 268 aaPredicted RBP20.88■□□□□ 0.93
PCDHA13-202ENST00000409494 G3V3G9 751 aa20.87■□□□□ 0.93
PCDHA13-202ENST00000409494 DCAF8Q5TAQ9 597 aa20.87■□□□□ 0.93
PCDHA13-202ENST00000409494 UGGT2Q9NYU1 1516 aa20.87■□□□□ 0.93
PCDHA13-202ENST00000409494 NRDCO43847 1150 aa20.86■□□□□ 0.93
PCDHA13-202ENST00000409494 PLEKHO1Q53GL0 409 aaPredicted RBP20.86■□□□□ 0.93
PCDHA13-202ENST00000409494 CDK19Q9BWU1 502 aa20.86■□□□□ 0.93
PCDHA13-202ENST00000409494 NLRP2Q9NX02 1062 aa20.86■□□□□ 0.93
PCDHA13-202ENST00000409494 RAPGEF6Q8TEU7 1601 aa20.86■□□□□ 0.93
PCDHA13-202ENST00000409494 GOLGA6L6A8MZA4 724 aa20.86■□□□□ 0.93
PCDHA13-202ENST00000409494 PLCH2O75038 1416 aa20.85■□□□□ 0.93
PCDHA13-202ENST00000409494 L1TD1Q5T7N2 865 aaKnown RBP20.84■□□□□ 0.93
PCDHA13-202ENST00000409494 NBPF1Q3BBV0 1214 aa20.84■□□□□ 0.93
PCDHA13-202ENST00000409494 HSP90B1P14625 803 aaKnown RBP20.84■□□□□ 0.93
PCDHA13-202ENST00000409494 RRP1P56182 461 aaKnown RBP20.84■□□□□ 0.93
PCDHA13-202ENST00000409494 WDR97A6NE52 1622 aa20.84■□□□□ 0.93
PCDHA13-202ENST00000409494 MTHFSP49914 203 aa20.83■□□□□ 0.93
PCDHA13-202ENST00000409494 HSP90AB4PQ58FF6 505 aa20.83■□□□□ 0.93
PCDHA13-202ENST00000409494 TRIM6-TRIM34B2RNG4 842 aa20.83■□□□□ 0.92
PCDHA13-202ENST00000409494 C9orf78Q9NZ63 289 aaPredicted RBP20.82■□□□□ 0.92
PCDHA13-202ENST00000409494 KIF3AQ9Y496 699 aa20.82■□□□□ 0.92
PCDHA13-202ENST00000409494 ADAMTS12P58397 1594 aa20.82■□□□□ 0.92
PCDHA13-202ENST00000409494 TSPYL4Q9UJ04 414 aa20.82■□□□□ 0.92
PCDHA13-202ENST00000409494 CCDC61Q9Y6R9 512 aa20.81■□□□□ 0.92
PCDHA13-202ENST00000409494 WWC1Q8IX03 1113 aa20.81■□□□□ 0.92
PCDHA13-202ENST00000409494 DZIP1LQ8IYY4 767 aaKnown RBP20.8■□□□□ 0.92
PCDHA13-202ENST00000409494 PNISRQ8TF01 805 aaKnown RBP20.8■□□□□ 0.92
PCDHA13-202ENST00000409494 PTMAP06454 111 aaKnown RBP20.8■□□□□ 0.92
PCDHA13-202ENST00000409494 EXOC6Q8TAG9 804 aa20.8■□□□□ 0.92
PCDHA13-202ENST00000409494 WDR62O43379 1518 aa20.8■□□□□ 0.92
PCDHA13-202ENST00000409494 ATP10BO94823 1461 aa20.8■□□□□ 0.92
PCDHA13-202ENST00000409494 GNL2Q13823 731 aaKnown RBP20.79■□□□□ 0.92
PCDHA13-202ENST00000409494 GPATCH8Q9UKJ3 1502 aaKnown RBP20.79■□□□□ 0.92
PCDHA13-202ENST00000409494 ELL2O00472 640 aaPredicted RBP20.79■□□□□ 0.92
PCDHA13-202ENST00000409494 NBPF8Q3BBV2 869 aa20.79■□□□□ 0.92
PCDHA13-202ENST00000409494 CCDC34Q96HJ3 373 aa20.79■□□□□ 0.92
PCDHA13-202ENST00000409494 FRAT2O75474 233 aaPredicted RBP20.79■□□□□ 0.92
PCDHA13-202ENST00000409494 PDE4AP27815 886 aa20.79■□□□□ 0.92
PCDHA13-202ENST00000409494 PPP2R1AP30153 589 aa20.79■□□□□ 0.92
PCDHA13-202ENST00000409494 NAP1L5Q96NT1 182 aaPredicted RBP20.79■□□□□ 0.92
PCDHA13-202ENST00000409494 DMRT2Q9Y5R5 561 aa20.78■□□□□ 0.92
PCDHA13-202ENST00000409494 GBP4Q96PP9 640 aa20.78■□□□□ 0.92
PCDHA13-202ENST00000409494 SPRYD3Q8NCJ5 442 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms