RNA–Protein interactions for RNA: ENST00000409214.5

GTDC1-206, Transcript of glycosyltransferase like domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTDC1, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTDC1-206ENST00000409214 FARP1Q9Y4F1 1045 aaPredicted RBP6.06□□□□□ -1.44
GTDC1-206ENST00000409214 RECKO95980 971 aa6.05□□□□□ -1.44
GTDC1-206ENST00000409214 CANXP27824 592 aaKnown RBP6.05□□□□□ -1.44
GTDC1-206ENST00000409214 NLRP7Q8WX94 980 aa6.05□□□□□ -1.44
GTDC1-206ENST00000409214 NCLP19338 710 aaKnown RBP6.05□□□□□ -1.44
GTDC1-206ENST00000409214 PHOX2BQ99453 314 aa6.05□□□□□ -1.44
GTDC1-206ENST00000409214 TBC1D2Q9BYX2 928 aa6.05□□□□□ -1.44
GTDC1-206ENST00000409214 CRISPLD2Q9H0B8 497 aa6.05□□□□□ -1.44
GTDC1-206ENST00000409214 EMILIN3Q9NT22 766 aa6.05□□□□□ -1.44
GTDC1-206ENST00000409214 SBNO2Q9Y2G9 1366 aa6.04□□□□□ -1.44
GTDC1-206ENST00000409214 MNX1P50219 401 aaPredicted RBP6.04□□□□□ -1.44
GTDC1-206ENST00000409214 PCDHB8Q9UN66 801 aa6.04□□□□□ -1.44
GTDC1-206ENST00000409214 PCDHB13Q9Y5F0 798 aa6.04□□□□□ -1.44
GTDC1-206ENST00000409214 PARNO95453 639 aaKnown RBP6.04□□□□□ -1.44
GTDC1-206ENST00000409214 HDGFL1Q5TGJ6 251 aa6.04□□□□□ -1.44
GTDC1-206ENST00000409214 PHLDB3Q6NSJ2 640 aa6.04□□□□□ -1.44
GTDC1-206ENST00000409214 NAP1L5Q96NT1 182 aaPredicted RBP6.04□□□□□ -1.44
GTDC1-206ENST00000409214 ZCCHC6Q5VYS8 1495 aaKnown RBP6.04□□□□□ -1.44
GTDC1-206ENST00000409214 ZC3H6P61129 1189 aaKnown RBP6.03□□□□□ -1.44
GTDC1-206ENST00000409214 CNPY4Q8N129 248 aa6.03□□□□□ -1.44
GTDC1-206ENST00000409214 C8orf37Q96NL8 207 aa6.03□□□□□ -1.44
GTDC1-206ENST00000409214 TSR1Q2NL82 804 aaKnown RBP6.03□□□□□ -1.44
GTDC1-206ENST00000409214 APBB1IPQ7Z5R6 666 aaPredicted RBP6.03□□□□□ -1.44
GTDC1-206ENST00000409214 RFC5P40937 340 aa6.03□□□□□ -1.44
GTDC1-206ENST00000409214 MYH16Q9H6N6 1097 aa6.03□□□□□ -1.44
GTDC1-206ENST00000409214 ANAPC15P60006 121 aa6.02□□□□□ -1.45
GTDC1-206ENST00000409214 FXR2P51116 673 aaKnown RBP eCLIP6.02□□□□□ -1.45
GTDC1-206ENST00000409214 FAM9BQ8IZU0 186 aa6.02□□□□□ -1.45
GTDC1-206ENST00000409214 EFCAB3Q8N7B9 438 aa6.01□□□□□ -1.45
GTDC1-206ENST00000409214 GRXCR2A6NFK2 248 aa6.01□□□□□ -1.45
GTDC1-206ENST00000409214 GNPATO15228 680 aa6.01□□□□□ -1.45
GTDC1-206ENST00000409214 C7P10643 843 aa6.01□□□□□ -1.45
GTDC1-206ENST00000409214 GNEQ9Y223 722 aaKnown RBP6.01□□□□□ -1.45
GTDC1-206ENST00000409214 LAS1LQ9Y4W2 734 aaKnown RBP6.01□□□□□ -1.45
GTDC1-206ENST00000409214 LNPKQ9C0E8 428 aa6□□□□□ -1.45
GTDC1-206ENST00000409214 LMOD1P29536 600 aaPredicted RBP6□□□□□ -1.45
GTDC1-206ENST00000409214 FAM43BQ6ZT52 329 aaPredicted RBP6□□□□□ -1.45
GTDC1-206ENST00000409214 LARGE2Q8N3Y3 721 aa6□□□□□ -1.45
GTDC1-206ENST00000409214 PPP1R12CQ9BZL4 782 aa6□□□□□ -1.45
GTDC1-206ENST00000409214 GABBR1Q9UBS5 961 aa6□□□□□ -1.45
GTDC1-206ENST00000409214 NLGN1Q8N2Q7 840 aa6□□□□□ -1.45
GTDC1-206ENST00000409214 UCN2Q96RP3 112 aa6□□□□□ -1.45
GTDC1-206ENST00000409214 BEGAINQ9BUH8 593 aa6□□□□□ -1.45
GTDC1-206ENST00000409214 PALM3A6NDB9 673 aaPredicted RBP5.99□□□□□ -1.45
GTDC1-206ENST00000409214 PITPNM1O00562 1244 aa5.99□□□□□ -1.45
GTDC1-206ENST00000409214 SERPINB4P48594 390 aa5.99□□□□□ -1.45
GTDC1-206ENST00000409214 MYSM1Q5VVJ2 828 aa5.99□□□□□ -1.45
GTDC1-206ENST00000409214 PLCD4Q9BRC7 762 aa5.99□□□□□ -1.45
GTDC1-206ENST00000409214 PRIM1P49642 420 aaKnown RBP5.99□□□□□ -1.45
GTDC1-206ENST00000409214 PIF1Q9H611 641 aa5.99□□□□□ -1.45
GTDC1-206ENST00000409214 TSNAXIP1Q2TAA8 658 aa5.98□□□□□ -1.45
GTDC1-206ENST00000409214 NPAS4Q8IUM7 802 aa5.98□□□□□ -1.45
GTDC1-206ENST00000409214 DHX38Q92620 1227 aaKnown RBP5.98□□□□□ -1.45
GTDC1-206ENST00000409214 SLAIN2Q9P270 581 aa5.98□□□□□ -1.45
GTDC1-206ENST00000409214 PDE4AP27815 886 aa5.98□□□□□ -1.45
GTDC1-206ENST00000409214 MDM2Q00987 491 aaPredicted RBP5.98□□□□□ -1.45
GTDC1-206ENST00000409214 TMTC2Q8N394 836 aa5.98□□□□□ -1.45
GTDC1-206ENST00000409214 STK32AQ8WU08 396 aa5.98□□□□□ -1.45
GTDC1-206ENST00000409214 GORABQ5T7V8 394 aa5.97□□□□□ -1.45
GTDC1-206ENST00000409214 ANKRD33BA6NCL7 494 aa5.97□□□□□ -1.45
GTDC1-206ENST00000409214 PDIA6Q15084 440 aa5.97□□□□□ -1.45
GTDC1-206ENST00000409214 SPACA7Q96KW9 195 aa5.97□□□□□ -1.45
GTDC1-206ENST00000409214 PSME1Q06323 249 aa5.97□□□□□ -1.45
GTDC1-206ENST00000409214 MS4A4AQ96JQ5 239 aa5.97□□□□□ -1.45
GTDC1-206ENST00000409214 SPTY2D1Q68D10 685 aaPredicted RBP5.96□□□□□ -1.46
GTDC1-206ENST00000409214 IQSEC3Q9UPP2 1182 aaPredicted RBP5.96□□□□□ -1.46
GTDC1-206ENST00000409214 GPR37L1O60883 481 aa5.96□□□□□ -1.46
GTDC1-206ENST00000409214 HSP90AB4PQ58FF6 505 aa5.96□□□□□ -1.46
GTDC1-206ENST00000409214 PMM1Q92871 262 aa5.96□□□□□ -1.46
GTDC1-206ENST00000409214 TMUB1Q9BVT8 246 aa5.96□□□□□ -1.46
GTDC1-206ENST00000409214 TFIP11Q9UBB9 837 aaKnown RBP5.96□□□□□ -1.46
GTDC1-206ENST00000409214 LIMD1Q9UGP4 676 aa5.96□□□□□ -1.46
GTDC1-206ENST00000409214 SSTR3P32745 418 aaPredicted RBP5.95□□□□□ -1.46
GTDC1-206ENST00000409214 MAFGO15525 162 aa5.94□□□□□ -1.46
GTDC1-206ENST00000409214 PPFIA4O75335 1185 aa5.94□□□□□ -1.46
GTDC1-206ENST00000409214 FAM161AQ3B820 660 aa5.94□□□□□ -1.46
GTDC1-206ENST00000409214 EGFLAMQ63HQ2 1017 aa5.94□□□□□ -1.46
GTDC1-206ENST00000409214 ZMIZ1Q9ULJ6 1067 aa5.94□□□□□ -1.46
GTDC1-206ENST00000409214 PAX3P23760 479 aa5.94□□□□□ -1.46
GTDC1-206ENST00000409214 ERCC5P28715 1186 aaPredicted RBP5.94□□□□□ -1.46
GTDC1-206ENST00000409214 VAC14Q08AM6 782 aa5.94□□□□□ -1.46
GTDC1-206ENST00000409214 CCDC144BQ3MJ40 725 aa5.94□□□□□ -1.46
GTDC1-206ENST00000409214 ZNF326Q5BKZ1 582 aaKnown RBP5.94□□□□□ -1.46
GTDC1-206ENST00000409214 PDE6BP35913 854 aa5.94□□□□□ -1.46
GTDC1-206ENST00000409214 TMEM164Q5U3C3 297 aa5.94□□□□□ -1.46
GTDC1-206ENST00000409214 OSBPP22059 807 aa5.93□□□□□ -1.46
GTDC1-206ENST00000409214 PDAP1Q13442 181 aaKnown RBP5.93□□□□□ -1.46
GTDC1-206ENST00000409214 TCEAL1Q15170 157 aa5.93□□□□□ -1.46
GTDC1-206ENST00000409214 BACH2Q9BYV9 841 aa5.93□□□□□ -1.46
GTDC1-206ENST00000409214 CABP2Q9NPB3 220 aa5.93□□□□□ -1.46
GTDC1-206ENST00000409214 CLK2P49760 499 aaKnown RBP5.93□□□□□ -1.46
GTDC1-206ENST00000409214 FOXD4Q12950 439 aaPredicted RBP5.93□□□□□ -1.46
GTDC1-206ENST00000409214 NME8Q8N427 588 aa5.93□□□□□ -1.46
GTDC1-206ENST00000409214 MARSP56192 900 aaKnown RBP5.92□□□□□ -1.46
GTDC1-206ENST00000409214 CREBZFQ9NS37 354 aa5.92□□□□□ -1.46
GTDC1-206ENST00000409214 HDLBPQ00341 1268 aaKnown RBP5.92□□□□□ -1.46
GTDC1-206ENST00000409214 EVX2Q03828 476 aa5.92□□□□□ -1.46
GTDC1-206ENST00000409214 HIC1Q14526 733 aa5.92□□□□□ -1.46
GTDC1-206ENST00000409214 GPATCH11Q8N954 259 aa5.92□□□□□ -1.46
GTDC1-206ENST00000409214 TERF2IPQ9NYB0 399 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms