RNA–Protein interactions for RNA: ENST00000406381.6

ERBB2-202, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 5 BASIC

Gene ERBB2, Length 4,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-202ENST00000406381 LMOD3Q0VAK6 560 aa15.86■□□□□ 0.13
ERBB2-202ENST00000406381 BCAR3O75815 825 aa15.86■□□□□ 0.13
ERBB2-202ENST00000406381 RBM10P98175 930 aaKnown RBP15.85■□□□□ 0.13
ERBB2-202ENST00000406381 TAOK2Q9UL54 1235 aa15.85■□□□□ 0.13
ERBB2-202ENST00000406381 ELL2O00472 640 aaPredicted RBP15.85■□□□□ 0.13
ERBB2-202ENST00000406381 PPP2R1AP30153 589 aa15.85■□□□□ 0.13
ERBB2-202ENST00000406381 STK31Q9BXU1 1019 aa15.84■□□□□ 0.13
ERBB2-202ENST00000406381 CAVIN1Q6NZI2 390 aaKnown RBP15.84■□□□□ 0.13
ERBB2-202ENST00000406381 SLC4A10Q6U841 1118 aa15.84■□□□□ 0.13
ERBB2-202ENST00000406381 TRAK1Q9UPV9 953 aa15.84■□□□□ 0.13
ERBB2-202ENST00000406381 SKAP1Q86WV1 359 aa15.83■□□□□ 0.13
ERBB2-202ENST00000406381 TPM4P67936 248 aa15.82■□□□□ 0.12
ERBB2-202ENST00000406381 DIAPH3Q9NSV4 1193 aa15.82■□□□□ 0.12
ERBB2-202ENST00000406381 NAIPQ13075 1403 aa15.82■□□□□ 0.12
ERBB2-202ENST00000406381 HMGN5P82970 282 aaKnown RBP15.81■□□□□ 0.12
ERBB2-202ENST00000406381 INTS3Q68E01 1043 aaKnown RBP15.81■□□□□ 0.12
ERBB2-202ENST00000406381 RNF214Q8ND24 703 aa15.81■□□□□ 0.12
ERBB2-202ENST00000406381 CIZ1Q9ULV3 898 aaPredicted RBP15.81■□□□□ 0.12
ERBB2-202ENST00000406381 ANKRD50Q9ULJ7 1429 aa15.81■□□□□ 0.12
ERBB2-202ENST00000406381 CFTRP13569 1480 aa15.81■□□□□ 0.12
ERBB2-202ENST00000406381 KIF3BO15066 747 aa15.8■□□□□ 0.12
ERBB2-202ENST00000406381 FGD5Q6ZNL6 1462 aa15.8■□□□□ 0.12
ERBB2-202ENST00000406381 GGT6Q6P531 493 aa15.8■□□□□ 0.12
ERBB2-202ENST00000406381 RILPL2Q969X0 211 aa15.8■□□□□ 0.12
ERBB2-202ENST00000406381 MBD3O95983 291 aa15.8■□□□□ 0.12
ERBB2-202ENST00000406381 SOX12O15370 315 aa15.79■□□□□ 0.12
ERBB2-202ENST00000406381 CDC45O75419 566 aa15.79■□□□□ 0.12
ERBB2-202ENST00000406381 GOLGA6L19H0YKK7 550 aa15.79■□□□□ 0.12
ERBB2-202ENST00000406381 TCP11L2Q8N4U5 519 aa15.79■□□□□ 0.12
ERBB2-202ENST00000406381 NINLQ9Y2I6 1382 aa15.79■□□□□ 0.12
ERBB2-202ENST00000406381 API5Q9BZZ5 524 aaKnown RBP15.79■□□□□ 0.12
ERBB2-202ENST00000406381 NCOA1Q15788 1441 aa15.79■□□□□ 0.12
ERBB2-202ENST00000406381 ZSCAN30Q86W11 494 aa15.78■□□□□ 0.12
ERBB2-202ENST00000406381 PLEKHG5O94827 1062 aa15.78■□□□□ 0.12
ERBB2-202ENST00000406381 C20orf194Q5TEA3 1177 aa15.78■□□□□ 0.12
ERBB2-202ENST00000406381 STAC3Q96MF2 364 aa15.78■□□□□ 0.12
ERBB2-202ENST00000406381 SPAG9O60271 1321 aaKnown RBP15.77■□□□□ 0.12
ERBB2-202ENST00000406381 RIPK4P57078 832 aa15.77■□□□□ 0.12
ERBB2-202ENST00000406381 ZNF592Q92610 1267 aa15.77■□□□□ 0.12
ERBB2-202ENST00000406381 A0A0U1RQG5 324 aaPredicted RBP15.77■□□□□ 0.11
ERBB2-202ENST00000406381 BECN2A8MW95 431 aa15.77■□□□□ 0.11
ERBB2-202ENST00000406381 PRPF40AO75400 957 aaKnown RBP15.76■□□□□ 0.11
ERBB2-202ENST00000406381 GPATCH3Q96I76 525 aa15.76■□□□□ 0.11
ERBB2-202ENST00000406381 NBPF1Q3BBV0 1214 aa15.76■□□□□ 0.11
ERBB2-202ENST00000406381 KIAA1107Q9UPP5 1409 aa15.75■□□□□ 0.11
ERBB2-202ENST00000406381 RABEP1Q15276 862 aa15.75■□□□□ 0.11
ERBB2-202ENST00000406381 CHMP4AQ9BY43 222 aa15.75■□□□□ 0.11
ERBB2-202ENST00000406381 SLFN5Q08AF3 891 aa15.74■□□□□ 0.11
ERBB2-202ENST00000406381 GNL2Q13823 731 aaKnown RBP15.74■□□□□ 0.11
ERBB2-202ENST00000406381 PDCL3Q9H2J4 239 aa15.74■□□□□ 0.11
ERBB2-202ENST00000406381 ANO2Q9NQ90 1003 aa15.74■□□□□ 0.11
ERBB2-202ENST00000406381 GOLGA6L1Q8N7Z2 621 aa15.73■□□□□ 0.11
ERBB2-202ENST00000406381 UQCRHLA0A096LP55 91 aa15.73■□□□□ 0.11
ERBB2-202ENST00000406381 K7ELQ4 463 aaPredicted RBP15.73■□□□□ 0.11
ERBB2-202ENST00000406381 UQCRHP07919 91 aa15.73■□□□□ 0.11
ERBB2-202ENST00000406381 HDAC5Q9UQL6 1122 aa15.73■□□□□ 0.11
ERBB2-202ENST00000406381 KIF3AQ9Y496 699 aa15.73■□□□□ 0.11
ERBB2-202ENST00000406381 JPH4Q96JJ6 628 aa15.72■□□□□ 0.11
ERBB2-202ENST00000406381 ZMYND15Q9H091 742 aa15.72■□□□□ 0.11
ERBB2-202ENST00000406381 EVC2Q86UK5 1308 aa15.72■□□□□ 0.11
ERBB2-202ENST00000406381 PODXL2Q9NZ53 605 aa15.72■□□□□ 0.11
ERBB2-202ENST00000406381 TOP2BQ02880 1626 aa15.72■□□□□ 0.11
ERBB2-202ENST00000406381 TPM3P06753 285 aa15.72■□□□□ 0.11
ERBB2-202ENST00000406381 FANCD2Q9BXW9 1451 aa15.72■□□□□ 0.11
ERBB2-202ENST00000406381 DIAPH1O60610 1272 aaKnown RBP15.72■□□□□ 0.11
ERBB2-202ENST00000406381 TBC1D2Q9BYX2 928 aa15.72■□□□□ 0.11
ERBB2-202ENST00000406381 IFT57Q9NWB7 429 aa15.72■□□□□ 0.11
ERBB2-202ENST00000406381 MAPKBP1O60336 1514 aa15.71■□□□□ 0.11
ERBB2-202ENST00000406381 HSP90B1P14625 803 aaKnown RBP15.71■□□□□ 0.11
ERBB2-202ENST00000406381 TSPY26PQ9H489 355 aa15.71■□□□□ 0.11
ERBB2-202ENST00000406381 CWC22Q9HCG8 908 aaKnown RBP15.71■□□□□ 0.11
ERBB2-202ENST00000406381 CLCN1P35523 988 aa15.71■□□□□ 0.1
ERBB2-202ENST00000406381 MAP3K1Q13233 1512 aa15.7■□□□□ 0.1
ERBB2-202ENST00000406381 MTHFSP49914 203 aa15.7■□□□□ 0.1
ERBB2-202ENST00000406381 MVPQ14764 893 aaKnown RBP15.7■□□□□ 0.1
ERBB2-202ENST00000406381 TEX35Q5T0J7 233 aa15.69■□□□□ 0.1
ERBB2-202ENST00000406381 GCC1Q96CN9 775 aa15.69■□□□□ 0.1
ERBB2-202ENST00000406381 CHMP3Q9Y3E7 222 aa15.69■□□□□ 0.1
ERBB2-202ENST00000406381 ROCK1Q13464 1354 aa15.69■□□□□ 0.1
ERBB2-202ENST00000406381 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.69■□□□□ 0.1
ERBB2-202ENST00000406381 ANKRD30BQ9BXX2 1392 aa15.69■□□□□ 0.1
ERBB2-202ENST00000406381 SF3A1Q15459 793 aaKnown RBP15.69■□□□□ 0.1
ERBB2-202ENST00000406381 SMC3Q9UQE7 1217 aa15.69■□□□□ 0.1
ERBB2-202ENST00000406381 EFCAB5A4FU69 1503 aa15.69■□□□□ 0.1
ERBB2-202ENST00000406381 EXOSC9Q06265 439 aaKnown RBP15.68■□□□□ 0.1
ERBB2-202ENST00000406381 MCM2P49736 904 aa15.68■□□□□ 0.1
ERBB2-202ENST00000406381 H3BQV1 296 aa15.68■□□□□ 0.1
ERBB2-202ENST00000406381 IFFO2Q5TF58 517 aa15.68■□□□□ 0.1
ERBB2-202ENST00000406381 WDR63Q8IWG1 891 aa15.68■□□□□ 0.1
ERBB2-202ENST00000406381 RAD54L2Q9Y4B4 1467 aa15.68■□□□□ 0.1
ERBB2-202ENST00000406381 LETM1O95202 739 aaPredicted RBP15.67■□□□□ 0.1
ERBB2-202ENST00000406381 NEK4P51957 841 aa15.67■□□□□ 0.1
ERBB2-202ENST00000406381 GNAI1P63096 354 aa15.67■□□□□ 0.1
ERBB2-202ENST00000406381 CT47B1P0C2W7 299 aaPredicted RBP15.67■□□□□ 0.1
ERBB2-202ENST00000406381 ZKSCAN1P17029 563 aaPredicted RBP15.67■□□□□ 0.1
ERBB2-202ENST00000406381 CCDC66A2RUB6 948 aa15.66■□□□□ 0.1
ERBB2-202ENST00000406381 GPS2Q13227 327 aa15.66■□□□□ 0.1
ERBB2-202ENST00000406381 RUFY2Q8WXA3 655 aa15.66■□□□□ 0.1
ERBB2-202ENST00000406381 VPS37CA5D8V6 355 aaPredicted RBP15.66■□□□□ 0.1
ERBB2-202ENST00000406381 EHBP1L1Q8N3D4 1523 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms