RNA–Protein interactions for RNA: ENST00000405943.3

HDGFP1-201, Transcript of heparin binding growth factor pseudogene 1, humanhuman

BASIC

Gene HDGFP1, Length 252 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP1-201ENST00000405943 POGKQ9P215 609 aa5.75□□□□□ -1.49
HDGFP1-201ENST00000405943 NPC1L1Q9UHC9 1359 aa5.75□□□□□ -1.49
HDGFP1-201ENST00000405943 PIK3C2GO75747 1445 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 CARMIL2Q6F5E8 1435 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 PRG4Q92954 1404 aaPredicted RBP5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 PRDM15P57071 1507 aaPredicted RBP5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 ADCY10Q96PN6 1610 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 FSD2A1L4K1 749 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 SKOR2Q2VWA4 1001 aaPredicted RBP5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 TRMT2AQ8IZ69 625 aaKnown RBP5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 SLKQ9H2G2 1235 aaPredicted RBP5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 MYH16Q9H6N6 1097 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 CCDC141Q6ZP82 1450 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 ABCC2Q92887 1545 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 SCAPERQ9BY12 1400 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 CENPJQ9HC77 1338 aaPredicted RBP5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 DISP3Q9P2K9 1392 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 PLEKHH1Q9ULM0 1364 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 MCM4P33991 863 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 SKAP1Q86WV1 359 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 HSCBQ8IWL3 235 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 TBC1D32Q96NH3 1257 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 TESK2Q96S53 571 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 ANTXR1Q9H6X2 564 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 RRAGDQ9NQL2 400 aaPredicted RBP5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 TARBP1Q13395 1621 aaKnown RBP5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 TRPM1Q7Z4N2 1603 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 DISP1Q96F81 1524 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 TRAK2O60296 914 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 XRCC6P12956 609 aaKnown RBP eCLIP5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 VSIG10Q8N0Z9 540 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 GBP4Q96PP9 640 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 ASXL1Q8IXJ9 1541 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 FAM135AQ9P2D6 1515 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 USP19O94966 1318 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 PLXNC1O60486 1568 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 ARHGEF5Q12774 1597 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 SYNJ2O15056 1496 aa5.71□□□□□ -1.49
HDGFP1-201ENST00000405943 ABCC10Q5T3U5 1492 aa5.71□□□□□ -1.49
HDGFP1-201ENST00000405943 ESPNB1AK53 854 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 GOLGA6L22H0YM25 854 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 MAP7D2Q96T17 732 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 TBC1D2Q9BYX2 928 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 GRPEL1Q9HAV7 217 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 CIZ1Q9ULV3 898 aaPredicted RBP5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 PBRM1Q86U86 1689 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 SYNMO15061 1565 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 A2MP01023 1474 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 MAGI1Q96QZ7 1491 aaPredicted RBP5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 IFT140Q96RY7 1462 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 IGHDP01880 384 aa5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 CT47B1P0C2W7 299 aaPredicted RBP5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 TERF1P54274 439 aa5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 NBPF1Q3BBV0 1214 aa5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 RGL3Q3MIN7 710 aa5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 NCBP3Q53F19 620 aaKnown RBP5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 ZMYND15Q9H091 742 aa5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 PDCL3Q9H2J4 239 aa5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 ATP10AO60312 1499 aa5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 APAF1O14727 1248 aa5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 BCAR3O75815 825 aa5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 CCDC173Q0VFZ6 552 aa5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 AMER1Q5JTC6 1135 aaPredicted RBP5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 MTERF4Q7Z6M4 381 aaKnown RBP5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 CFAP44Q96MT7 982 aa5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 C22orf23Q9BZE7 217 aa5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 GZF1Q9H116 711 aaPredicted RBP5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 GRIN2AQ12879 1464 aa5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 SCAF11Q99590 1463 aaKnown RBP5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 WDR7Q9Y4E6 1490 aa5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 MSNP26038 577 aaKnown RBP5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 WDR63Q8IWG1 891 aa5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 CHMP4BQ9H444 224 aaKnown RBP5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 COG6Q9Y2V7 657 aa5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 MAGI2Q86UL8 1455 aa5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 NLRP1Q9C000 1473 aa5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 MRC2Q9UBG0 1479 aa5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 UNC13BO14795 1591 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 PLB1Q6P1J6 1458 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 SEC24BO95487 1268 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 HSP90AB1P08238 724 aaKnown RBP5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 HS1BP3Q53T59 392 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 FTSJ3Q8IY81 847 aaKnown RBP5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 CCDC146Q8IYE0 955 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 PANK1Q8TE04 598 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 SNX21Q969T3 373 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 RUNDC1Q96C34 613 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 CFAP53Q96M91 514 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 ARXQ96QS3 562 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 PDZRN3Q9UPQ7 1066 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 KIF16BQ96L93 1317 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 POLR3AO14802 1390 aaPredicted RBP5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 HNRNPMP52272 730 aaKnown RBP eCLIP5.66□□□□□ -1.5
HDGFP1-201ENST00000405943 RARSP54136 660 aaKnown RBP5.66□□□□□ -1.5
HDGFP1-201ENST00000405943 MFAP1P55081 439 aaKnown RBP5.66□□□□□ -1.5
HDGFP1-201ENST00000405943 CALD1Q05682 793 aaKnown RBP5.66□□□□□ -1.5
HDGFP1-201ENST00000405943 CSPP1Q1MSJ5 1256 aa5.66□□□□□ -1.5
HDGFP1-201ENST00000405943 CCDC27Q2M243 656 aa5.66□□□□□ -1.5
HDGFP1-201ENST00000405943 ZKSCAN2Q63HK3 967 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms