RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 LIMD1Q9UGP4 676 aa7.71□□□□□ -1.18
HMGB1P17-201ENST00000403495 SEPT9Q9UHD8 586 aaPredicted RBP7.71□□□□□ -1.18
HMGB1P17-201ENST00000403495 CD46P15529 392 aa7.7□□□□□ -1.18
HMGB1P17-201ENST00000403495 TMEM134Q9H6X4 195 aa7.7□□□□□ -1.18
HMGB1P17-201ENST00000403495 CLK2P49760 499 aaKnown RBP7.69□□□□□ -1.18
HMGB1P17-201ENST00000403495 CSPP1Q1MSJ5 1256 aa7.69□□□□□ -1.18
HMGB1P17-201ENST00000403495 SPIRE2Q8WWL2 714 aa7.69□□□□□ -1.18
HMGB1P17-201ENST00000403495 NDUFV2P19404 249 aa7.68□□□□□ -1.18
HMGB1P17-201ENST00000403495 EMP3P54852 163 aa7.68□□□□□ -1.18
HMGB1P17-201ENST00000403495 RDH13Q8NBN7 331 aa7.68□□□□□ -1.18
HMGB1P17-201ENST00000403495 CLUAP1Q96AJ1 413 aa7.68□□□□□ -1.18
HMGB1P17-201ENST00000403495 FAM205CA6NFA0 338 aa7.67□□□□□ -1.18
HMGB1P17-201ENST00000403495 MOXD2PA6NHM9 499 aa7.67□□□□□ -1.18
HMGB1P17-201ENST00000403495 KCNH8Q96L42 1107 aa7.67□□□□□ -1.18
HMGB1P17-201ENST00000403495 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.67□□□□□ -1.18
HMGB1P17-201ENST00000403495 ARID3CA6NKF2 412 aa7.66□□□□□ -1.18
HMGB1P17-201ENST00000403495 ARHGAP33O14559 1287 aa7.66□□□□□ -1.18
HMGB1P17-201ENST00000403495 MCM6Q14566 821 aa7.66□□□□□ -1.18
HMGB1P17-201ENST00000403495 SWT1Q5T5J6 900 aaKnown RBP7.66□□□□□ -1.18
HMGB1P17-201ENST00000403495 RIC3Q7Z5B4 369 aa7.66□□□□□ -1.18
HMGB1P17-201ENST00000403495 NUTM1Q86Y26 1132 aa7.66□□□□□ -1.18
HMGB1P17-201ENST00000403495 POTEB3A0JP26 581 aa7.65□□□□□ -1.18
HMGB1P17-201ENST00000403495 FLIIQ13045 1269 aa7.65□□□□□ -1.18
HMGB1P17-201ENST00000403495 POTEBQ6S5H4 581 aa7.65□□□□□ -1.18
HMGB1P17-201ENST00000403495 SULF1Q8IWU6 871 aa7.65□□□□□ -1.18
HMGB1P17-201ENST00000403495 SLC10A3P09131 477 aa7.64□□□□□ -1.19
HMGB1P17-201ENST00000403495 HLA-CQ95604 372 aa7.64□□□□□ -1.19
HMGB1P17-201ENST00000403495 FAM163AQ96GL9 167 aaPredicted RBP7.64□□□□□ -1.19
HMGB1P17-201ENST00000403495 POM121Q96HA1 1249 aa7.64□□□□□ -1.19
HMGB1P17-201ENST00000403495 PCDHB15Q9Y5E8 787 aa7.64□□□□□ -1.19
HMGB1P17-201ENST00000403495 RFC5P40937 340 aa7.63□□□□□ -1.19
HMGB1P17-201ENST00000403495 GUCA2AQ02747 115 aa7.63□□□□□ -1.19
HMGB1P17-201ENST00000403495 QPCTQ16769 361 aa7.63□□□□□ -1.19
HMGB1P17-201ENST00000403495 RSBN1LQ6PCB5 846 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P17-201ENST00000403495 C1orf115Q9H7X2 142 aa7.63□□□□□ -1.19
HMGB1P17-201ENST00000403495 SNRKQ9NRH2 765 aa7.63□□□□□ -1.19
HMGB1P17-201ENST00000403495 RABGEF1Q9UJ41 708 aa7.63□□□□□ -1.19
HMGB1P17-201ENST00000403495 UBTFP17480 764 aaKnown RBP7.62□□□□□ -1.19
HMGB1P17-201ENST00000403495 CABLES1Q8TDN4 633 aa7.62□□□□□ -1.19
HMGB1P17-201ENST00000403495 ARID3AQ99856 593 aa7.62□□□□□ -1.19
HMGB1P17-201ENST00000403495 VPS9D1Q9Y2B5 631 aa7.62□□□□□ -1.19
HMGB1P17-201ENST00000403495 SPTLC1O15269 473 aa7.61□□□□□ -1.19
HMGB1P17-201ENST00000403495 RNF40O75150 1001 aa7.61□□□□□ -1.19
HMGB1P17-201ENST00000403495 KDM4AO75164 1064 aa7.6□□□□□ -1.19
HMGB1P17-201ENST00000403495 DIXDC1Q155Q3 683 aa7.6□□□□□ -1.19
HMGB1P17-201ENST00000403495 RTL5Q5HYW3 569 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P17-201ENST00000403495 SAMD7Q7Z3H4 446 aa7.6□□□□□ -1.19
HMGB1P17-201ENST00000403495 ZNF687Q8N1G0 1237 aa7.6□□□□□ -1.19
HMGB1P17-201ENST00000403495 HS3ST6Q96QI5 342 aa7.6□□□□□ -1.19
HMGB1P17-201ENST00000403495 GCGRP47871 477 aa7.59□□□□□ -1.19
HMGB1P17-201ENST00000403495 HOXA2O43364 376 aa7.58□□□□□ -1.2
HMGB1P17-201ENST00000403495 FAM98CQ17RN3 349 aaKnown RBP7.58□□□□□ -1.2
HMGB1P17-201ENST00000403495 LCE2DQ5TA82 110 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P17-201ENST00000403495 SLC4A5Q9BY07 1137 aa7.58□□□□□ -1.2
HMGB1P17-201ENST00000403495 PCDHGC3Q9UN70 934 aa7.58□□□□□ -1.2
HMGB1P17-201ENST00000403495 APBB1O00213 710 aa7.57□□□□□ -1.2
HMGB1P17-201ENST00000403495 PBX2P40425 430 aa7.57□□□□□ -1.2
HMGB1P17-201ENST00000403495 NUTM2BA6NNL0 878 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P17-201ENST00000403495 NUTM2EB1AL46 878 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P17-201ENST00000403495 LILRB3O75022 631 aa7.56□□□□□ -1.2
HMGB1P17-201ENST00000403495 AP1G2O75843 785 aa7.56□□□□□ -1.2
HMGB1P17-201ENST00000403495 CFHP08603 1231 aa7.56□□□□□ -1.2
HMGB1P17-201ENST00000403495 FDX1P10109 184 aa7.56□□□□□ -1.2
HMGB1P17-201ENST00000403495 NUTM2DQ5VT03 806 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P17-201ENST00000403495 PPP2R2DQ66LE6 453 aa7.56□□□□□ -1.2
HMGB1P17-201ENST00000403495 NUTM2AQ8IVF1 878 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P17-201ENST00000403495 ARXQ96QS3 562 aa7.56□□□□□ -1.2
HMGB1P17-201ENST00000403495 TRAK2O60296 914 aa7.55□□□□□ -1.2
HMGB1P17-201ENST00000403495 HRCP23327 699 aa7.55□□□□□ -1.2
HMGB1P17-201ENST00000403495 FUT2Q10981 343 aa7.55□□□□□ -1.2
HMGB1P17-201ENST00000403495 SPDYE5A6NIY4 337 aa7.54□□□□□ -1.2
HMGB1P17-201ENST00000403495 A6NJR5 290 aa7.54□□□□□ -1.2
HMGB1P17-201ENST00000403495 BHMG1C9JSJ3 638 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P17-201ENST00000403495 HDGFP51858 240 aaKnown RBP7.54□□□□□ -1.2
HMGB1P17-201ENST00000403495 RSPH4AQ5TD94 716 aa7.54□□□□□ -1.2
HMGB1P17-201ENST00000403495 CDAN1Q8IWY9 1227 aa7.54□□□□□ -1.2
HMGB1P17-201ENST00000403495 MTMR14Q8NCE2 650 aa7.54□□□□□ -1.2
HMGB1P17-201ENST00000403495 SYMPKQ92797 1274 aaKnown RBP7.54□□□□□ -1.2
HMGB1P17-201ENST00000403495 ZFRQ96KR1 1074 aaKnown RBP7.54□□□□□ -1.2
HMGB1P17-201ENST00000403495 ZNF777Q9ULD5 760 aaPredicted RBP7.54□□□□□ -1.2
HMGB1P17-201ENST00000403495 COG6Q9Y2V7 657 aa7.54□□□□□ -1.2
HMGB1P17-201ENST00000403495 TUSC1Q2TAM9 212 aa7.53□□□□□ -1.2
HMGB1P17-201ENST00000403495 PROSER2Q86WR7 435 aaPredicted RBP7.53□□□□□ -1.2
HMGB1P17-201ENST00000403495 HOMEZQ8IX15 550 aa7.53□□□□□ -1.2
HMGB1P17-201ENST00000403495 SLF2Q8IX21 1173 aa7.53□□□□□ -1.2
HMGB1P17-201ENST00000403495 TSC1Q92574 1164 aa7.53□□□□□ -1.2
HMGB1P17-201ENST00000403495 NBPF3Q9H094 633 aa7.53□□□□□ -1.2
HMGB1P17-201ENST00000403495 USP46P62068 366 aa7.52□□□□□ -1.21
HMGB1P17-201ENST00000403495 LSM11P83369 360 aaKnown RBP eCLIP7.52□□□□□ -1.21
HMGB1P17-201ENST00000403495 PUS10Q3MIT2 529 aaKnown RBP7.52□□□□□ -1.21
HMGB1P17-201ENST00000403495 TMEM259Q4ZIN3 620 aa7.52□□□□□ -1.21
HMGB1P17-201ENST00000403495 ADGRD1Q6QNK2 874 aa7.52□□□□□ -1.21
HMGB1P17-201ENST00000403495 MRPL50Q8N5N7 158 aaKnown RBP7.52□□□□□ -1.21
HMGB1P17-201ENST00000403495 ZBTB3Q9H5J0 574 aa7.52□□□□□ -1.21
HMGB1P17-201ENST00000403495 GDPD2Q9HCC8 539 aa7.52□□□□□ -1.21
HMGB1P17-201ENST00000403495 RAD21O60216 631 aa7.51□□□□□ -1.21
HMGB1P17-201ENST00000403495 USP17L8P0C7I0 530 aa7.51□□□□□ -1.21
HMGB1P17-201ENST00000403495 ANKRD13DQ6ZTN6 518 aa7.51□□□□□ -1.21
HMGB1P17-201ENST00000403495 BANK1Q8NDB2 785 aa7.51□□□□□ -1.21
HMGB1P17-201ENST00000403495 C6orf229H3BNL8 230 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms