RNA–Protein interactions for RNA: ENST00000398978.7

COL13A1-205, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS P4 TSL 5 BASIC

Gene COL13A1, Length 3,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-205ENST00000398978 ZCCHC11Q5TAX3 1644 aaKnown RBP25.64■■□□□ 1.69
COL13A1-205ENST00000398978 MADDQ8WXG6 1647 aa25.64■■□□□ 1.69
COL13A1-205ENST00000398978 SHROOM2Q13796 1616 aa25.63■■□□□ 1.69
COL13A1-205ENST00000398978 ABCC1P33527 1531 aa25.63■■□□□ 1.69
COL13A1-205ENST00000398978 RNF17Q9BXT8 1623 aaKnown RBP25.62■■□□□ 1.69
COL13A1-205ENST00000398978 MS4A1P11836 297 aa25.61■■□□□ 1.69
COL13A1-205ENST00000398978 TNNT2P45379 298 aaPredicted RBP25.61■■□□□ 1.69
COL13A1-205ENST00000398978 ADGRF5Q8IZF2 1346 aa25.61■■□□□ 1.69
COL13A1-205ENST00000398978 CHGAP10645 457 aaKnown RBP25.6■■□□□ 1.69
COL13A1-205ENST00000398978 DMRT2Q9Y5R5 561 aa25.6■■□□□ 1.69
COL13A1-205ENST00000398978 SCAF11Q99590 1463 aaKnown RBP25.6■■□□□ 1.69
COL13A1-205ENST00000398978 UGGT1Q9NYU2 1555 aa25.6■■□□□ 1.69
COL13A1-205ENST00000398978 RGS3P49796 1198 aa25.6■■□□□ 1.69
COL13A1-205ENST00000398978 BCAR3O75815 825 aa25.59■■□□□ 1.69
COL13A1-205ENST00000398978 CLTCL1P53675 1640 aa25.59■■□□□ 1.69
COL13A1-205ENST00000398978 SENP3Q9H4L4 574 aaPredicted RBP25.59■■□□□ 1.69
COL13A1-205ENST00000398978 NEFMP07197 916 aa25.58■■□□□ 1.69
COL13A1-205ENST00000398978 CDCA8Q53HL2 280 aa25.57■■□□□ 1.68
COL13A1-205ENST00000398978 CARD14Q9BXL6 1004 aa25.57■■□□□ 1.68
COL13A1-205ENST00000398978 ZNF521Q96K83 1311 aa25.56■■□□□ 1.68
COL13A1-205ENST00000398978 SCAPERQ9BY12 1400 aa25.56■■□□□ 1.68
COL13A1-205ENST00000398978 IQGAP1P46940 1657 aa25.56■■□□□ 1.68
COL13A1-205ENST00000398978 SLFN5Q08AF3 891 aa25.55■■□□□ 1.68
COL13A1-205ENST00000398978 NEUROD2Q15784 382 aa25.55■■□□□ 1.68
COL13A1-205ENST00000398978 KDM2BQ8NHM5 1336 aa25.54■■□□□ 1.68
COL13A1-205ENST00000398978 ASXL1Q8IXJ9 1541 aa25.54■■□□□ 1.68
COL13A1-205ENST00000398978 TRPM2O94759 1503 aa25.52■■□□□ 1.68
COL13A1-205ENST00000398978 INSRP06213 1382 aa25.52■■□□□ 1.68
COL13A1-205ENST00000398978 ZFYVE16Q7Z3T8 1539 aa25.51■■□□□ 1.67
COL13A1-205ENST00000398978 SPHKAPQ2M3C7 1700 aa25.5■■□□□ 1.67
COL13A1-205ENST00000398978 RRP7AQ9Y3A4 280 aaKnown RBP25.5■■□□□ 1.67
COL13A1-205ENST00000398978 PTPRTO14522 1441 aa25.49■■□□□ 1.67
COL13A1-205ENST00000398978 KANK1Q14678 1352 aa25.49■■□□□ 1.67
COL13A1-205ENST00000398978 TRAK1Q9UPV9 953 aa25.48■■□□□ 1.67
COL13A1-205ENST00000398978 SYNMO15061 1565 aa25.48■■□□□ 1.67
COL13A1-205ENST00000398978 CENPQQ7L2Z9 268 aaPredicted RBP25.48■■□□□ 1.67
COL13A1-205ENST00000398978 CEP152O94986 1710 aa25.47■■□□□ 1.67
COL13A1-205ENST00000398978 NUTM2DQ5VT03 806 aaPredicted RBP25.47■■□□□ 1.67
COL13A1-205ENST00000398978 EIF3AQ14152 1382 aaKnown RBP25.46■■□□□ 1.67
COL13A1-205ENST00000398978 MYOM1P52179 1685 aa25.46■■□□□ 1.67
COL13A1-205ENST00000398978 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.45■■□□□ 1.67
COL13A1-205ENST00000398978 TMEM132EQ6IEE7 984 aa25.45■■□□□ 1.66
COL13A1-205ENST00000398978 CFAP65Q6ZU64 1925 aaKnown RBP25.44■■□□□ 1.66
COL13A1-205ENST00000398978 FANCAO15360 1455 aa25.44■■□□□ 1.66
COL13A1-205ENST00000398978 PIK3C2GO75747 1445 aa25.44■■□□□ 1.66
COL13A1-205ENST00000398978 ERVK-7P63135 1459 aa25.43■■□□□ 1.66
COL13A1-205ENST00000398978 SLC12A5Q9H2X9 1139 aa25.43■■□□□ 1.66
COL13A1-205ENST00000398978 C8orf34Q49A92 452 aa25.42■■□□□ 1.66
COL13A1-205ENST00000398978 RTEL1-TNFRSF6BF6WH68 1400 aa25.42■■□□□ 1.66
COL13A1-205ENST00000398978 ATP7AQ04656 1500 aa25.41■■□□□ 1.66
COL13A1-205ENST00000398978 PANK1Q8TE04 598 aa25.41■■□□□ 1.66
COL13A1-205ENST00000398978 TRMT2AQ8IZ69 625 aaKnown RBP25.4■■□□□ 1.66
COL13A1-205ENST00000398978 IGHDP01880 384 aa25.4■■□□□ 1.66
COL13A1-205ENST00000398978 FRAT1Q92837 279 aaPredicted RBP25.4■■□□□ 1.66
COL13A1-205ENST00000398978 GGT6Q6P531 493 aa25.39■■□□□ 1.66
COL13A1-205ENST00000398978 CANXP27824 592 aaKnown RBP25.38■■□□□ 1.65
COL13A1-205ENST00000398978 COG6Q9Y2V7 657 aa25.38■■□□□ 1.65
COL13A1-205ENST00000398978 KDM5AP29375 1690 aaKnown RBP25.38■■□□□ 1.65
COL13A1-205ENST00000398978 FAM161AQ3B820 660 aa25.38■■□□□ 1.65
COL13A1-205ENST00000398978 TET3O43151 1660 aa25.38■■□□□ 1.65
COL13A1-205ENST00000398978 ADGRL1O94910 1474 aa25.38■■□□□ 1.65
COL13A1-205ENST00000398978 BCL2L13Q9BXK5 485 aa25.37■■□□□ 1.65
COL13A1-205ENST00000398978 UHRF1BP1LA0JNW5 1464 aa25.36■■□□□ 1.65
COL13A1-205ENST00000398978 NKTRP30414 1462 aaKnown RBP25.36■■□□□ 1.65
COL13A1-205ENST00000398978 ABCA6Q8N139 1617 aa25.36■■□□□ 1.65
COL13A1-205ENST00000398978 E9PSI1 815 aa25.36■■□□□ 1.65
COL13A1-205ENST00000398978 MORC1Q86VD1 984 aa25.36■■□□□ 1.65
COL13A1-205ENST00000398978 TNNQ9UQP3 1299 aa25.35■■□□□ 1.65
COL13A1-205ENST00000398978 NOS1P29475 1434 aa25.35■■□□□ 1.65
COL13A1-205ENST00000398978 DDRGK1Q96HY6 314 aa25.35■■□□□ 1.65
COL13A1-205ENST00000398978 DAXXQ9UER7 740 aaPredicted RBP25.35■■□□□ 1.65
COL13A1-205ENST00000398978 WWC1Q8IX03 1113 aa25.34■■□□□ 1.65
COL13A1-205ENST00000398978 STAC3Q96MF2 364 aa25.34■■□□□ 1.65
COL13A1-205ENST00000398978 RTN4Q9NQC3 1192 aaKnown RBP25.34■■□□□ 1.65
COL13A1-205ENST00000398978 CENPJQ9HC77 1338 aaPredicted RBP25.34■■□□□ 1.65
COL13A1-205ENST00000398978 SAFB2Q14151 953 aaKnown RBP eCLIP25.33■■□□□ 1.65
COL13A1-205ENST00000398978 IL27Q8NEV9 243 aa25.33■■□□□ 1.65
COL13A1-205ENST00000398978 DEPDC5O75140 1603 aa25.33■■□□□ 1.65
COL13A1-205ENST00000398978 CLASP1Q7Z460 1538 aa25.33■■□□□ 1.65
COL13A1-205ENST00000398978 NPC1L1Q9UHC9 1359 aa25.32■■□□□ 1.64
COL13A1-205ENST00000398978 NSD3Q9BZ95 1437 aa25.32■■□□□ 1.64
COL13A1-205ENST00000398978 MAP3K4Q9Y6R4 1608 aa25.31■■□□□ 1.64
COL13A1-205ENST00000398978 PPM1GO15355 546 aaPredicted RBP25.31■■□□□ 1.64
COL13A1-205ENST00000398978 MROH2AA6NES4 1674 aa25.29■■□□□ 1.64
COL13A1-205ENST00000398978 NFKBIBQ15653 356 aa25.28■■□□□ 1.64
COL13A1-205ENST00000398978 INO80Q9ULG1 1556 aaPredicted RBP25.28■■□□□ 1.64
COL13A1-205ENST00000398978 CLUAP1Q96AJ1 413 aa25.28■■□□□ 1.64
COL13A1-205ENST00000398978 MROH1Q8NDA8 1641 aa25.27■■□□□ 1.64
COL13A1-205ENST00000398978 TCP11L2Q8N4U5 519 aa25.27■■□□□ 1.64
COL13A1-205ENST00000398978 VWDEQ8N2E2 1590 aa25.26■■□□□ 1.64
COL13A1-205ENST00000398978 MTHFSP49914 203 aa25.26■■□□□ 1.63
COL13A1-205ENST00000398978 SEC24BO95487 1268 aa25.25■■□□□ 1.63
COL13A1-205ENST00000398978 KIF1BO60333 1816 aa25.24■■□□□ 1.63
COL13A1-205ENST00000398978 RLBP1P12271 317 aa25.23■■□□□ 1.63
COL13A1-205ENST00000398978 PPRC1Q5VV67 1664 aaKnown RBP25.22■■□□□ 1.63
COL13A1-205ENST00000398978 ABCA9Q8IUA7 1624 aa25.22■■□□□ 1.63
COL13A1-205ENST00000398978 MYOM2P54296 1465 aa25.22■■□□□ 1.63
COL13A1-205ENST00000398978 ASXL2Q76L83 1435 aa25.22■■□□□ 1.63
COL13A1-205ENST00000398978 USP35Q9P2H5 1018 aa25.21■■□□□ 1.63
COL13A1-205ENST00000398978 CABP2Q9NPB3 220 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms