RNA–Protein interactions for RNA: ENST00000398844.6

SEC24A-202, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SEC24A, Length 6,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-202ENST00000398844 NCOA1Q15788 1441 aa11.57□□□□□ -0.56
SEC24A-202ENST00000398844 RAPGEF3O95398 923 aa11.57□□□□□ -0.56
SEC24A-202ENST00000398844 ITSN2Q9NZM3 1697 aa11.57□□□□□ -0.56
SEC24A-202ENST00000398844 BCAR3O75815 825 aa11.56□□□□□ -0.56
SEC24A-202ENST00000398844 RPRD2Q5VT52 1461 aaKnown RBP11.56□□□□□ -0.56
SEC24A-202ENST00000398844 HAP1P54257 671 aaPredicted RBP11.56□□□□□ -0.56
SEC24A-202ENST00000398844 DISP3Q9P2K9 1392 aa11.55□□□□□ -0.56
SEC24A-202ENST00000398844 CASC1Q6TDU7 716 aa11.55□□□□□ -0.56
SEC24A-202ENST00000398844 SLC4A10Q6U841 1118 aa11.55□□□□□ -0.56
SEC24A-202ENST00000398844 RTF1Q92541 710 aaKnown RBP11.55□□□□□ -0.56
SEC24A-202ENST00000398844 NECTIN2Q92692 538 aa11.55□□□□□ -0.56
SEC24A-202ENST00000398844 SLC12A5Q9H2X9 1139 aa11.55□□□□□ -0.56
SEC24A-202ENST00000398844 RWDD1Q9H446 243 aaPredicted RBP11.55□□□□□ -0.56
SEC24A-202ENST00000398844 E9PSI1 815 aa11.54□□□□□ -0.56
SEC24A-202ENST00000398844 OS9Q13438 667 aaPredicted RBP11.54□□□□□ -0.56
SEC24A-202ENST00000398844 SYCP2Q9BX26 1530 aa11.54□□□□□ -0.56
SEC24A-202ENST00000398844 HSCBQ8IWL3 235 aa11.54□□□□□ -0.56
SEC24A-202ENST00000398844 PLEKHH2Q8IVE3 1493 aa11.53□□□□□ -0.56
SEC24A-202ENST00000398844 VGFO15240 615 aaPredicted RBP11.53□□□□□ -0.56
SEC24A-202ENST00000398844 PMFBP1Q8TBY8 1022 aa11.53□□□□□ -0.56
SEC24A-202ENST00000398844 SAMD9Q5K651 1589 aa11.53□□□□□ -0.56
SEC24A-202ENST00000398844 ATP10BO94823 1461 aa11.53□□□□□ -0.56
SEC24A-202ENST00000398844 CENPQQ7L2Z9 268 aaPredicted RBP11.53□□□□□ -0.56
SEC24A-202ENST00000398844 RIPK4P57078 832 aa11.52□□□□□ -0.56
SEC24A-202ENST00000398844 NUTM2GQ5VZR2 741 aa11.52□□□□□ -0.56
SEC24A-202ENST00000398844 MTHFSP49914 203 aa11.52□□□□□ -0.57
SEC24A-202ENST00000398844 SMG6Q86US8 1419 aaKnown RBP11.52□□□□□ -0.57
SEC24A-202ENST00000398844 TCOF1Q13428 1488 aaKnown RBP11.52□□□□□ -0.57
SEC24A-202ENST00000398844 MS4A1P11836 297 aa11.51□□□□□ -0.57
SEC24A-202ENST00000398844 NOL8Q76FK4 1167 aaKnown RBP11.51□□□□□ -0.57
SEC24A-202ENST00000398844 C20orf194Q5TEA3 1177 aa11.51□□□□□ -0.57
SEC24A-202ENST00000398844 CEP170Q5SW79 1584 aa11.51□□□□□ -0.57
SEC24A-202ENST00000398844 MSH5O43196 834 aa11.5□□□□□ -0.57
SEC24A-202ENST00000398844 HDGFP51858 240 aaKnown RBP11.5□□□□□ -0.57
SEC24A-202ENST00000398844 TSR2Q969E8 191 aaKnown RBP11.5□□□□□ -0.57
SEC24A-202ENST00000398844 NGDNQ8NEJ9 315 aaKnown RBP11.5□□□□□ -0.57
SEC24A-202ENST00000398844 FANCIQ9NVI1 1328 aa11.5□□□□□ -0.57
SEC24A-202ENST00000398844 DISP1Q96F81 1524 aa11.5□□□□□ -0.57
SEC24A-202ENST00000398844 RUNDC1Q96C34 613 aa11.5□□□□□ -0.57
SEC24A-202ENST00000398844 PRAM1Q96QH2 718 aa11.5□□□□□ -0.57
SEC24A-202ENST00000398844 DNMT1P26358 1616 aaKnown RBP11.5□□□□□ -0.57
SEC24A-202ENST00000398844 IPO8O15397 1037 aaKnown RBP11.49□□□□□ -0.57
SEC24A-202ENST00000398844 FAM161AQ3B820 660 aa11.49□□□□□ -0.57
SEC24A-202ENST00000398844 FOXD4L5Q5VV16 416 aaPredicted RBP11.48□□□□□ -0.57
SEC24A-202ENST00000398844 FOXD4L4Q8WXT5 416 aaPredicted RBP11.48□□□□□ -0.57
SEC24A-202ENST00000398844 DIAPH1O60610 1272 aaKnown RBP11.48□□□□□ -0.57
SEC24A-202ENST00000398844 TARBP1Q13395 1621 aaKnown RBP11.48□□□□□ -0.57
SEC24A-202ENST00000398844 FAM135AQ9P2D6 1515 aa11.48□□□□□ -0.57
SEC24A-202ENST00000398844 ADGRF5Q8IZF2 1346 aa11.48□□□□□ -0.57
SEC24A-202ENST00000398844 ANKRD45Q5TZF3 282 aa11.48□□□□□ -0.57
SEC24A-202ENST00000398844 COG3Q96JB2 828 aa11.48□□□□□ -0.57
SEC24A-202ENST00000398844 AMPHP49418 695 aa11.48□□□□□ -0.57
SEC24A-202ENST00000398844 ZNF428Q96B54 188 aa11.47□□□□□ -0.57
SEC24A-202ENST00000398844 C1orf115Q9H7X2 142 aa11.47□□□□□ -0.57
SEC24A-202ENST00000398844 ZKSCAN2Q63HK3 967 aa11.46□□□□□ -0.57
SEC24A-202ENST00000398844 GCC2Q8IWJ2 1684 aa11.46□□□□□ -0.57
SEC24A-202ENST00000398844 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.46□□□□□ -0.57
SEC24A-202ENST00000398844 TCP11L2Q8N4U5 519 aa11.46□□□□□ -0.57
SEC24A-202ENST00000398844 TXNDC2Q86VQ3 553 aa11.46□□□□□ -0.58
SEC24A-202ENST00000398844 TRIM44Q96DX7 344 aaPredicted RBP11.45□□□□□ -0.58
SEC24A-202ENST00000398844 PZPP20742 1482 aa11.45□□□□□ -0.58
SEC24A-202ENST00000398844 NSD3Q9BZ95 1437 aa11.45□□□□□ -0.58
SEC24A-202ENST00000398844 ADGRL1O94910 1474 aa11.45□□□□□ -0.58
SEC24A-202ENST00000398844 CDK19Q9BWU1 502 aa11.45□□□□□ -0.58
SEC24A-202ENST00000398844 GOLGA6L22H0YM25 854 aa11.44□□□□□ -0.58
SEC24A-202ENST00000398844 EID1Q9Y6B2 187 aa11.44□□□□□ -0.58
SEC24A-202ENST00000398844 NAP1L2Q9ULW6 460 aaPredicted RBP11.44□□□□□ -0.58
SEC24A-202ENST00000398844 ZNF330Q9Y3S2 320 aaPredicted RBP11.44□□□□□ -0.58
SEC24A-202ENST00000398844 TRIM6-TRIM34B2RNG4 842 aa11.43□□□□□ -0.58
SEC24A-202ENST00000398844 CCDC9Q9Y3X0 531 aaKnown RBP11.43□□□□□ -0.58
SEC24A-202ENST00000398844 CABP1Q9NZU7 370 aa11.43□□□□□ -0.58
SEC24A-202ENST00000398844 ADGBQ8N7X0 1667 aa11.43□□□□□ -0.58
SEC24A-202ENST00000398844 PLCB2Q00722 1185 aa11.43□□□□□ -0.58
SEC24A-202ENST00000398844 DZIP1LQ8IYY4 767 aaKnown RBP11.43□□□□□ -0.58
SEC24A-202ENST00000398844 EXOSC9Q06265 439 aaKnown RBP11.42□□□□□ -0.58
SEC24A-202ENST00000398844 NOB1Q9ULX3 412 aaKnown RBP11.42□□□□□ -0.58
SEC24A-202ENST00000398844 LRRIQ1Q96JM4 1722 aa11.41□□□□□ -0.58
SEC24A-202ENST00000398844 CSB-PGBD3P0DP91 1061 aa11.41□□□□□ -0.58
SEC24A-202ENST00000398844 FANCAO15360 1455 aa11.41□□□□□ -0.58
SEC24A-202ENST00000398844 FBLN1P23142 703 aa11.41□□□□□ -0.58
SEC24A-202ENST00000398844 CALD1Q05682 793 aaKnown RBP11.41□□□□□ -0.58
SEC24A-202ENST00000398844 WAPLQ7Z5K2 1190 aa11.41□□□□□ -0.58
SEC24A-202ENST00000398844 NAP1L5Q96NT1 182 aaPredicted RBP11.41□□□□□ -0.58
SEC24A-202ENST00000398844 RRS1Q15050 365 aaKnown RBP11.41□□□□□ -0.58
SEC24A-202ENST00000398844 KCNJ4P48050 445 aa11.4□□□□□ -0.58
SEC24A-202ENST00000398844 NOS1P29475 1434 aa11.4□□□□□ -0.58
SEC24A-202ENST00000398844 EIF2S2P20042 333 aaKnown RBP11.4□□□□□ -0.58
SEC24A-202ENST00000398844 FBXO31Q5XUX0 539 aaPredicted RBP11.4□□□□□ -0.58
SEC24A-202ENST00000398844 CHMP4BQ9H444 224 aaKnown RBP11.4□□□□□ -0.58
SEC24A-202ENST00000398844 LNPKQ9C0E8 428 aa11.4□□□□□ -0.58
SEC24A-202ENST00000398844 TRAPPC8Q9Y2L5 1435 aa11.4□□□□□ -0.58
SEC24A-202ENST00000398844 RALGAPBQ86X10 1494 aa11.4□□□□□ -0.58
SEC24A-202ENST00000398844 FOXD4L6Q3SYB3 417 aaPredicted RBP11.4□□□□□ -0.59
SEC24A-202ENST00000398844 FOXD4L3Q6VB84 417 aaPredicted RBP11.4□□□□□ -0.59
SEC24A-202ENST00000398844 PRKAR2BP31323 418 aa11.39□□□□□ -0.59
SEC24A-202ENST00000398844 NGEFQ8N5V2 710 aa11.39□□□□□ -0.59
SEC24A-202ENST00000398844 STK31Q9BXU1 1019 aa11.38□□□□□ -0.59
SEC24A-202ENST00000398844 RILPL2Q969X0 211 aa11.38□□□□□ -0.59
SEC24A-202ENST00000398844 PTMAP06454 111 aaKnown RBP11.38□□□□□ -0.59
SEC24A-202ENST00000398844 CD109Q6YHK3 1445 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms