RNA–Protein interactions for RNA: ENST00000398179.3

CCBE1-201, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 5 BASIC

Gene CCBE1, Length 5,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-201ENST00000398179 DBN1Q16643 649 aa15.58■□□□□ 0.08
CCBE1-201ENST00000398179 SPRYD3Q8NCJ5 442 aa15.58■□□□□ 0.08
CCBE1-201ENST00000398179 ZCRB1Q8TBF4 217 aaKnown RBP15.58■□□□□ 0.08
CCBE1-201ENST00000398179 ZCCHC6Q5VYS8 1495 aaKnown RBP15.58■□□□□ 0.08
CCBE1-201ENST00000398179 TTLL5Q6EMB2 1281 aa15.58■□□□□ 0.08
CCBE1-201ENST00000398179 SLMAPQ14BN4 828 aa15.57■□□□□ 0.08
CCBE1-201ENST00000398179 GOLGA6L9A6NEM1 432 aa15.57■□□□□ 0.08
CCBE1-201ENST00000398179 VGLL3A8MV65 326 aa15.57■□□□□ 0.08
CCBE1-201ENST00000398179 MNAT1P51948 309 aa15.57■□□□□ 0.08
CCBE1-201ENST00000398179 NAP1L4Q99733 375 aaKnown RBP15.57■□□□□ 0.08
CCBE1-201ENST00000398179 FOXD4L5Q5VV16 416 aaPredicted RBP15.56■□□□□ 0.08
CCBE1-201ENST00000398179 FOXD4L4Q8WXT5 416 aaPredicted RBP15.56■□□□□ 0.08
CCBE1-201ENST00000398179 CHGAP10645 457 aaKnown RBP15.56■□□□□ 0.08
CCBE1-201ENST00000398179 FAM160A1Q05DH4 1040 aa15.56■□□□□ 0.08
CCBE1-201ENST00000398179 KIAA0754O94854 1291 aa15.56■□□□□ 0.08
CCBE1-201ENST00000398179 CCDC181Q5TID7 509 aa15.56■□□□□ 0.08
CCBE1-201ENST00000398179 FOSBP53539 338 aa15.56■□□□□ 0.08
CCBE1-201ENST00000398179 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.55■□□□□ 0.08
CCBE1-201ENST00000398179 FAM114A1Q8IWE2 563 aa15.55■□□□□ 0.08
CCBE1-201ENST00000398179 KDM2AQ9Y2K7 1162 aa15.55■□□□□ 0.08
CCBE1-201ENST00000398179 PPP4R3BQ5MIZ7 849 aa15.55■□□□□ 0.08
CCBE1-201ENST00000398179 TPM1P09493 284 aa15.54■□□□□ 0.08
CCBE1-201ENST00000398179 IBSPP21815 317 aaPredicted RBP15.54■□□□□ 0.08
CCBE1-201ENST00000398179 BRPF3Q9ULD4 1205 aa15.54■□□□□ 0.08
CCBE1-201ENST00000398179 SEPT6Q14141 434 aa15.54■□□□□ 0.08
CCBE1-201ENST00000398179 BTN2A1Q7KYR7 527 aa15.53■□□□□ 0.08
CCBE1-201ENST00000398179 HSP90B2PQ58FF3 399 aa15.53■□□□□ 0.08
CCBE1-201ENST00000398179 DNAAF4Q8WXU2 420 aa15.53■□□□□ 0.08
CCBE1-201ENST00000398179 CHIC2Q9UKJ5 165 aa15.53■□□□□ 0.08
CCBE1-201ENST00000398179 APBB1O00213 710 aa15.52■□□□□ 0.08
CCBE1-201ENST00000398179 FMNL3Q8IVF7 1028 aa15.52■□□□□ 0.08
CCBE1-201ENST00000398179 CCDC27Q2M243 656 aa15.52■□□□□ 0.08
CCBE1-201ENST00000398179 TTC36A6NLP5 189 aa15.52■□□□□ 0.08
CCBE1-201ENST00000398179 GOLGA6L7A0A1B0GV03 622 aa15.52■□□□□ 0.07
CCBE1-201ENST00000398179 ZNF853P0CG23 659 aa15.52■□□□□ 0.07
CCBE1-201ENST00000398179 CCDC173Q0VFZ6 552 aa15.52■□□□□ 0.07
CCBE1-201ENST00000398179 EIF4G2P78344 907 aaKnown RBP eCLIP15.51■□□□□ 0.07
CCBE1-201ENST00000398179 RPAINQ86UA6 219 aa15.51■□□□□ 0.07
CCBE1-201ENST00000398179 NUCKS1Q9H1E3 243 aaKnown RBP15.51■□□□□ 0.07
CCBE1-201ENST00000398179 UQCRHLA0A096LP55 91 aa15.5■□□□□ 0.07
CCBE1-201ENST00000398179 UQCRHP07919 91 aa15.5■□□□□ 0.07
CCBE1-201ENST00000398179 NBPF1Q3BBV0 1214 aa15.5■□□□□ 0.07
CCBE1-201ENST00000398179 MRE11P49959 708 aa15.5■□□□□ 0.07
CCBE1-201ENST00000398179 TRIM63Q969Q1 353 aa15.5■□□□□ 0.07
CCBE1-201ENST00000398179 GZF1Q9H116 711 aaPredicted RBP15.49■□□□□ 0.07
CCBE1-201ENST00000398179 ANKRD20A12PQ8NF67 263 aa15.49■□□□□ 0.07
CCBE1-201ENST00000398179 ERCC4Q92889 916 aaPredicted RBP15.49■□□□□ 0.07
CCBE1-201ENST00000398179 CCDC39Q9UFE4 941 aa15.49■□□□□ 0.07
CCBE1-201ENST00000398179 GIGYF2Q6Y7W6 1299 aaKnown RBP15.49■□□□□ 0.07
CCBE1-201ENST00000398179 KIAA1211Q6ZU35 1233 aa15.49■□□□□ 0.07
CCBE1-201ENST00000398179 RMDN2Q96LZ7 410 aa15.48■□□□□ 0.07
CCBE1-201ENST00000398179 FBLN2P98095 1184 aa15.47■□□□□ 0.07
CCBE1-201ENST00000398179 RPUSD2Q8IZ73 545 aaKnown RBP15.47■□□□□ 0.07
CCBE1-201ENST00000398179 FOXD4L6Q3SYB3 417 aaPredicted RBP15.47■□□□□ 0.07
CCBE1-201ENST00000398179 FOXD4L3Q6VB84 417 aaPredicted RBP15.47■□□□□ 0.07
CCBE1-201ENST00000398179 CCDC70Q6NSX1 233 aa15.46■□□□□ 0.07
CCBE1-201ENST00000398179 MICALCLQ6ZW33 695 aa15.46■□□□□ 0.07
CCBE1-201ENST00000398179 SATB2Q9UPW6 733 aa15.45■□□□□ 0.06
CCBE1-201ENST00000398179 RNF214Q8ND24 703 aa15.45■□□□□ 0.06
CCBE1-201ENST00000398179 SESN3P58005 492 aa15.45■□□□□ 0.06
CCBE1-201ENST00000398179 CAVIN1Q6NZI2 390 aaKnown RBP15.45■□□□□ 0.06
CCBE1-201ENST00000398179 CASQ1P31415 396 aa15.45■□□□□ 0.06
CCBE1-201ENST00000398179 ZBTB17Q13105 803 aa15.45■□□□□ 0.06
CCBE1-201ENST00000398179 KIF5CO60282 957 aa15.44■□□□□ 0.06
CCBE1-201ENST00000398179 ANKRD13AQ8IZ07 590 aa15.44■□□□□ 0.06
CCBE1-201ENST00000398179 AEBP2Q6ZN18 517 aaPredicted RBP15.44■□□□□ 0.06
CCBE1-201ENST00000398179 RABEP1Q15276 862 aa15.44■□□□□ 0.06
CCBE1-201ENST00000398179 PPP4R4Q6NUP7 873 aa15.44■□□□□ 0.06
CCBE1-201ENST00000398179 IPO7O95373 1038 aaKnown RBP15.43■□□□□ 0.06
CCBE1-201ENST00000398179 ABCC9O60706 1549 aa15.43■□□□□ 0.06
CCBE1-201ENST00000398179 TTC31Q49AM3 519 aaPredicted RBP15.43■□□□□ 0.06
CCBE1-201ENST00000398179 CCDC92Q53HC0 331 aaPredicted RBP15.43■□□□□ 0.06
CCBE1-201ENST00000398179 RBBP5Q15291 538 aaKnown RBP15.42■□□□□ 0.06
CCBE1-201ENST00000398179 SYCP1Q15431 976 aa15.42■□□□□ 0.06
CCBE1-201ENST00000398179 CCDC152Q4G0S7 254 aa15.42■□□□□ 0.06
CCBE1-201ENST00000398179 CIZ1Q9ULV3 898 aaPredicted RBP15.42■□□□□ 0.06
CCBE1-201ENST00000398179 SPATA24Q86W54 205 aa15.42■□□□□ 0.06
CCBE1-201ENST00000398179 RASSF4Q9H2L5 321 aa15.42■□□□□ 0.06
CCBE1-201ENST00000398179 EIF3JO75822 258 aaKnown RBP15.42■□□□□ 0.06
CCBE1-201ENST00000398179 WDHD1O75717 1129 aaPredicted RBP15.41■□□□□ 0.06
CCBE1-201ENST00000398179 POLR3GO15318 223 aaPredicted RBP15.41■□□□□ 0.06
CCBE1-201ENST00000398179 SEPT7Q16181 437 aaKnown RBP15.41■□□□□ 0.06
CCBE1-201ENST00000398179 CAGE1Q8TC20 777 aa15.41■□□□□ 0.06
CCBE1-201ENST00000398179 GOPCQ9HD26 462 aa15.41■□□□□ 0.06
CCBE1-201ENST00000398179 FRAT1Q92837 279 aaPredicted RBP15.41■□□□□ 0.06
CCBE1-201ENST00000398179 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.41■□□□□ 0.06
CCBE1-201ENST00000398179 KIF1CO43896 1103 aaKnown RBP15.4■□□□□ 0.06
CCBE1-201ENST00000398179 ANAPC4Q9UJX5 808 aa15.4■□□□□ 0.06
CCBE1-201ENST00000398179 BLVRAP53004 296 aa15.4■□□□□ 0.06
CCBE1-201ENST00000398179 RNF20Q5VTR2 975 aa15.4■□□□□ 0.06
CCBE1-201ENST00000398179 MKL2Q9ULH7 1088 aa15.4■□□□□ 0.06
CCBE1-201ENST00000398179 FAM184BQ9ULE4 1060 aa15.39■□□□□ 0.05
CCBE1-201ENST00000398179 TXLNBQ8N3L3 684 aa15.39■□□□□ 0.05
CCBE1-201ENST00000398179 ZNF513Q8N8E2 541 aaPredicted RBP15.39■□□□□ 0.05
CCBE1-201ENST00000398179 A0A1B0GUA9 196 aa15.38■□□□□ 0.05
CCBE1-201ENST00000398179 A0A1B0GUL7 405 aa15.38■□□□□ 0.05
CCBE1-201ENST00000398179 SHTN1A0MZ66 631 aa15.38■□□□□ 0.05
CCBE1-201ENST00000398179 NUP133Q8WUM0 1156 aa15.38■□□□□ 0.05
CCBE1-201ENST00000398179 CBX1P83916 185 aa15.38■□□□□ 0.05
CCBE1-201ENST00000398179 STAG3Q9UJ98 1225 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms