RNA–Protein interactions for RNA: ENST00000396208.3

CCP110-202, Transcript of centriolar coiled-coil protein 110, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCP110, Length 5,151 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCP110-202ENST00000396208 SPG7Q9UQ90 795 aa9.48□□□□□ -0.89
CCP110-202ENST00000396208 SMC4Q9NTJ3 1288 aa9.48□□□□□ -0.89
CCP110-202ENST00000396208 DAPK1P53355 1430 aa9.47□□□□□ -0.89
CCP110-202ENST00000396208 KCNJ4P48050 445 aa9.47□□□□□ -0.89
CCP110-202ENST00000396208 LRRFIP1Q32MZ4 808 aaKnown RBP9.47□□□□□ -0.89
CCP110-202ENST00000396208 CTDP1Q9Y5B0 961 aaPredicted RBP9.47□□□□□ -0.89
CCP110-202ENST00000396208 PRXQ9BXM0 1461 aa9.46□□□□□ -0.89
CCP110-202ENST00000396208 HIRIP3Q9BW71 556 aaPredicted RBP9.46□□□□□ -0.89
CCP110-202ENST00000396208 C11orf95C9JLR9 678 aaPredicted RBP9.46□□□□□ -0.9
CCP110-202ENST00000396208 ZNF518AQ6AHZ1 1483 aa9.46□□□□□ -0.9
CCP110-202ENST00000396208 HMMRO75330 724 aa9.45□□□□□ -0.9
CCP110-202ENST00000396208 USP35Q9P2H5 1018 aa9.45□□□□□ -0.9
CCP110-202ENST00000396208 LRRC9Q6ZRR7 1453 aa9.44□□□□□ -0.9
CCP110-202ENST00000396208 RUSC2Q8N2Y8 1516 aa9.44□□□□□ -0.9
CCP110-202ENST00000396208 RTEL1-TNFRSF6BF6WH68 1400 aa9.44□□□□□ -0.9
CCP110-202ENST00000396208 ZNF644Q9H582 1327 aaPredicted RBP9.44□□□□□ -0.9
CCP110-202ENST00000396208 ABCC2Q92887 1545 aa9.43□□□□□ -0.9
CCP110-202ENST00000396208 NPHP3Q7Z494 1330 aa9.43□□□□□ -0.9
CCP110-202ENST00000396208 L3MBTL2Q969R5 705 aa9.43□□□□□ -0.9
CCP110-202ENST00000396208 ANP32BQ92688 251 aaKnown RBP9.43□□□□□ -0.9
CCP110-202ENST00000396208 LRRC59Q96AG4 307 aaKnown RBP9.43□□□□□ -0.9
CCP110-202ENST00000396208 DHX29Q7Z478 1369 aaKnown RBP9.42□□□□□ -0.9
CCP110-202ENST00000396208 DIAPH1O60610 1272 aaKnown RBP9.42□□□□□ -0.9
CCP110-202ENST00000396208 CEBPAP49715 358 aaPredicted RBP9.42□□□□□ -0.9
CCP110-202ENST00000396208 ZRSR1Q15695 479 aaKnown RBP9.42□□□□□ -0.9
CCP110-202ENST00000396208 NGEFQ8N5V2 710 aa9.42□□□□□ -0.9
CCP110-202ENST00000396208 GAS2L2Q8NHY3 880 aa9.42□□□□□ -0.9
CCP110-202ENST00000396208 ADAMTS2O95450 1211 aa9.42□□□□□ -0.9
CCP110-202ENST00000396208 CCDC136Q96JN2 1154 aa9.42□□□□□ -0.9
CCP110-202ENST00000396208 KIF6Q6ZMV9 814 aa9.42□□□□□ -0.9
CCP110-202ENST00000396208 VPS37DQ86XT2 251 aa9.42□□□□□ -0.9
CCP110-202ENST00000396208 UHRF1BP1LA0JNW5 1464 aa9.42□□□□□ -0.9
CCP110-202ENST00000396208 ATAD2Q6PL18 1390 aa9.41□□□□□ -0.9
CCP110-202ENST00000396208 ANP32AP39687 249 aaKnown RBP9.41□□□□□ -0.9
CCP110-202ENST00000396208 ABCC10Q5T3U5 1492 aa9.41□□□□□ -0.9
CCP110-202ENST00000396208 HSPA5P11021 654 aaKnown RBP9.41□□□□□ -0.9
CCP110-202ENST00000396208 NCLP19338 710 aaKnown RBP9.41□□□□□ -0.9
CCP110-202ENST00000396208 PRAM1Q96QH2 718 aa9.41□□□□□ -0.9
CCP110-202ENST00000396208 PLCH2O75038 1416 aa9.41□□□□□ -0.9
CCP110-202ENST00000396208 MCCP23508 829 aa9.41□□□□□ -0.9
CCP110-202ENST00000396208 AMOTL2Q9Y2J4 779 aa9.41□□□□□ -0.9
CCP110-202ENST00000396208 ARHGEF11O15085 1522 aa9.41□□□□□ -0.9
CCP110-202ENST00000396208 POLD1P28340 1107 aa9.4□□□□□ -0.9
CCP110-202ENST00000396208 PNISRQ8TF01 805 aaKnown RBP9.4□□□□□ -0.9
CCP110-202ENST00000396208 PHF8Q9UPP1 1060 aa9.4□□□□□ -0.9
CCP110-202ENST00000396208 FRAT1Q92837 279 aaPredicted RBP9.4□□□□□ -0.9
CCP110-202ENST00000396208 SUPT6HQ7KZ85 1726 aaKnown RBP9.4□□□□□ -0.91
CCP110-202ENST00000396208 EIF4G3O43432 1585 aaKnown RBP9.39□□□□□ -0.91
CCP110-202ENST00000396208 PMFBP1Q8TBY8 1022 aa9.39□□□□□ -0.91
CCP110-202ENST00000396208 RBM42Q9BTD8 480 aaKnown RBP9.38□□□□□ -0.91
CCP110-202ENST00000396208 ERBINQ96RT1 1412 aa9.38□□□□□ -0.91
CCP110-202ENST00000396208 EXOC5O00471 708 aa9.38□□□□□ -0.91
CCP110-202ENST00000396208 BCL11BQ9C0K0 894 aaPredicted RBP9.38□□□□□ -0.91
CCP110-202ENST00000396208 ZNF652Q9Y2D9 606 aa9.38□□□□□ -0.91
CCP110-202ENST00000396208 CABP4P57796 275 aa9.38□□□□□ -0.91
CCP110-202ENST00000396208 KIAA1211Q6ZU35 1233 aa9.38□□□□□ -0.91
CCP110-202ENST00000396208 C19orf44Q9H6X5 657 aa9.38□□□□□ -0.91
CCP110-202ENST00000396208 CCDC61Q9Y6R9 512 aa9.38□□□□□ -0.91
CCP110-202ENST00000396208 CHMP4CQ96CF2 233 aa9.37□□□□□ -0.91
CCP110-202ENST00000396208 CCAR1Q8IX12 1150 aaKnown RBP9.37□□□□□ -0.91
CCP110-202ENST00000396208 C16orf71Q8IYS4 520 aaPredicted RBP9.37□□□□□ -0.91
CCP110-202ENST00000396208 NUP160Q12769 1436 aa9.37□□□□□ -0.91
CCP110-202ENST00000396208 CDK19Q9BWU1 502 aa9.37□□□□□ -0.91
CCP110-202ENST00000396208 NEO1Q92859 1461 aa9.37□□□□□ -0.91
CCP110-202ENST00000396208 KIF21AQ7Z4S6 1674 aa9.37□□□□□ -0.91
CCP110-202ENST00000396208 FBXW7Q969H0 707 aa9.36□□□□□ -0.91
CCP110-202ENST00000396208 NUTM2GQ5VZR2 741 aa9.36□□□□□ -0.91
CCP110-202ENST00000396208 ADAMTS12P58397 1594 aa9.36□□□□□ -0.91
CCP110-202ENST00000396208 ATP10AO60312 1499 aa9.36□□□□□ -0.91
CCP110-202ENST00000396208 A2MP01023 1474 aa9.36□□□□□ -0.91
CCP110-202ENST00000396208 HSPA2P54652 639 aa9.35□□□□□ -0.91
CCP110-202ENST00000396208 TMEM132EQ6IEE7 984 aa9.35□□□□□ -0.91
CCP110-202ENST00000396208 KRT28Q7Z3Y7 464 aa9.35□□□□□ -0.91
CCP110-202ENST00000396208 DDX54Q8TDD1 881 aaKnown RBP9.35□□□□□ -0.91
CCP110-202ENST00000396208 CDCA7Q9BWT1 371 aaPredicted RBP9.35□□□□□ -0.91
CCP110-202ENST00000396208 ZNF772Q68DY9 489 aaPredicted RBP9.35□□□□□ -0.91
CCP110-202ENST00000396208 ST20-MTHFSA0A0A6YYL1 179 aa9.34□□□□□ -0.91
CCP110-202ENST00000396208 BAG6P46379 1132 aa9.34□□□□□ -0.91
CCP110-202ENST00000396208 STARD3NLO95772 234 aa9.34□□□□□ -0.91
CCP110-202ENST00000396208 KIAA1107Q9UPP5 1409 aa9.34□□□□□ -0.91
CCP110-202ENST00000396208 ZPR1O75312 459 aa9.34□□□□□ -0.91
CCP110-202ENST00000396208 NAP1L2Q9ULW6 460 aaPredicted RBP9.34□□□□□ -0.91
CCP110-202ENST00000396208 C9orf78Q9NZ63 289 aaPredicted RBP9.34□□□□□ -0.92
CCP110-202ENST00000396208 BIVM-ERCC5R4GMW8 1640 aa9.33□□□□□ -0.92
CCP110-202ENST00000396208 ANP32EQ9BTT0 268 aa9.33□□□□□ -0.92
CCP110-202ENST00000396208 CABP2Q9NPB3 220 aa9.33□□□□□ -0.92
CCP110-202ENST00000396208 CFAP70Q5T0N1 1121 aa9.33□□□□□ -0.92
CCP110-202ENST00000396208 C8orf37Q96NL8 207 aa9.33□□□□□ -0.92
CCP110-202ENST00000396208 SMARCC1Q92922 1105 aaPredicted RBP9.33□□□□□ -0.92
CCP110-202ENST00000396208 CFAP74Q9C0B2 1584 aa9.33□□□□□ -0.92
CCP110-202ENST00000396208 BECN1Q14457 450 aa9.33□□□□□ -0.92
CCP110-202ENST00000396208 A0A087WZG4 1122 aa9.32□□□□□ -0.92
CCP110-202ENST00000396208 CDK13Q14004 1512 aaKnown RBP9.32□□□□□ -0.92
CCP110-202ENST00000396208 PANK3Q9H999 370 aa9.32□□□□□ -0.92
CCP110-202ENST00000396208 NUDT16Q96DE0 195 aaKnown RBP9.32□□□□□ -0.92
CCP110-202ENST00000396208 CCDC34Q96HJ3 373 aa9.32□□□□□ -0.92
CCP110-202ENST00000396208 AK7Q96M32 723 aa9.32□□□□□ -0.92
CCP110-202ENST00000396208 UGGT2Q9NYU1 1516 aa9.31□□□□□ -0.92
CCP110-202ENST00000396208 RAPGEF6Q8TEU7 1601 aa9.31□□□□□ -0.92
CCP110-202ENST00000396208 SLC4A10Q6U841 1118 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms