RNA–Protein interactions for RNA: ENST00000395983.7

BDNF-206, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-206ENST00000395983 PPP2R1AP30153 589 aa10.74□□□□□ -0.69
BDNF-206ENST00000395983 ADAMTS8Q9UP79 889 aa10.74□□□□□ -0.69
BDNF-206ENST00000395983 ASXL1Q8IXJ9 1541 aa10.74□□□□□ -0.69
BDNF-206ENST00000395983 AAMPQ13685 434 aa10.72□□□□□ -0.69
BDNF-206ENST00000395983 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.72□□□□□ -0.69
BDNF-206ENST00000395983 E9PSI1 815 aa10.71□□□□□ -0.69
BDNF-206ENST00000395983 DUSP27Q5VZP5 1158 aa10.71□□□□□ -0.69
BDNF-206ENST00000395983 TTC37Q6PGP7 1564 aa10.71□□□□□ -0.69
BDNF-206ENST00000395983 KDM2BQ8NHM5 1336 aa10.71□□□□□ -0.7
BDNF-206ENST00000395983 ABCC2Q92887 1545 aa10.71□□□□□ -0.7
BDNF-206ENST00000395983 IQGAP1P46940 1657 aa10.7□□□□□ -0.7
BDNF-206ENST00000395983 CGNL1Q0VF96 1302 aa10.7□□□□□ -0.7
BDNF-206ENST00000395983 WDR7Q9Y4E6 1490 aa10.7□□□□□ -0.7
BDNF-206ENST00000395983 PLCH2O75038 1416 aa10.7□□□□□ -0.7
BDNF-206ENST00000395983 NKTRP30414 1462 aaKnown RBP10.7□□□□□ -0.7
BDNF-206ENST00000395983 RTEL1-TNFRSF6BF6WH68 1400 aa10.69□□□□□ -0.7
BDNF-206ENST00000395983 TRPM2O94759 1503 aa10.69□□□□□ -0.7
BDNF-206ENST00000395983 SLFN5Q08AF3 891 aa10.69□□□□□ -0.7
BDNF-206ENST00000395983 MADDQ8WXG6 1647 aa10.69□□□□□ -0.7
BDNF-206ENST00000395983 CANXP27824 592 aaKnown RBP10.69□□□□□ -0.7
BDNF-206ENST00000395983 BECN1Q14457 450 aa10.69□□□□□ -0.7
BDNF-206ENST00000395983 GSE1Q14687 1217 aa10.69□□□□□ -0.7
BDNF-206ENST00000395983 MAPK8IP3Q9UPT6 1336 aa10.69□□□□□ -0.7
BDNF-206ENST00000395983 AMER1Q5JTC6 1135 aaPredicted RBP10.69□□□□□ -0.7
BDNF-206ENST00000395983 SPAG9O60271 1321 aaKnown RBP10.68□□□□□ -0.7
BDNF-206ENST00000395983 KDM5AP29375 1690 aaKnown RBP10.68□□□□□ -0.7
BDNF-206ENST00000395983 SPHKAPQ2M3C7 1700 aa10.68□□□□□ -0.7
BDNF-206ENST00000395983 KIAA1210Q9ULL0 1709 aa10.68□□□□□ -0.7
BDNF-206ENST00000395983 SHROOM2Q13796 1616 aa10.68□□□□□ -0.7
BDNF-206ENST00000395983 ZNF521Q96K83 1311 aa10.68□□□□□ -0.7
BDNF-206ENST00000395983 UPF2Q9HAU5 1272 aaKnown RBP10.68□□□□□ -0.7
BDNF-206ENST00000395983 CEP152O94986 1710 aa10.67□□□□□ -0.7
BDNF-206ENST00000395983 PDE3AQ14432 1141 aa10.67□□□□□ -0.7
BDNF-206ENST00000395983 NEURL4Q96JN8 1562 aa10.67□□□□□ -0.7
BDNF-206ENST00000395983 PLEKHH1Q9ULM0 1364 aa10.66□□□□□ -0.7
BDNF-206ENST00000395983 NFKBIBQ15653 356 aa10.66□□□□□ -0.7
BDNF-206ENST00000395983 ABCC1P33527 1531 aa10.66□□□□□ -0.7
BDNF-206ENST00000395983 ARAP3Q8WWN8 1544 aa10.65□□□□□ -0.7
BDNF-206ENST00000395983 PTPRTO14522 1441 aa10.65□□□□□ -0.71
BDNF-206ENST00000395983 TET3O43151 1660 aa10.64□□□□□ -0.71
BDNF-206ENST00000395983 RGS3P49796 1198 aa10.64□□□□□ -0.71
BDNF-206ENST00000395983 C20orf194Q5TEA3 1177 aa10.64□□□□□ -0.71
BDNF-206ENST00000395983 PMFBP1Q8TBY8 1022 aa10.64□□□□□ -0.71
BDNF-206ENST00000395983 CENPJQ9HC77 1338 aaPredicted RBP10.64□□□□□ -0.71
BDNF-206ENST00000395983 TRMT2AQ8IZ69 625 aaKnown RBP10.64□□□□□ -0.71
BDNF-206ENST00000395983 APAF1O14727 1248 aa10.63□□□□□ -0.71
BDNF-206ENST00000395983 ZMYM3Q14202 1370 aa10.62□□□□□ -0.71
BDNF-206ENST00000395983 C8orf34Q49A92 452 aa10.62□□□□□ -0.71
BDNF-206ENST00000395983 CFAP53Q96M91 514 aa10.62□□□□□ -0.71
BDNF-206ENST00000395983 UHRF1BP1LA0JNW5 1464 aa10.62□□□□□ -0.71
BDNF-206ENST00000395983 MYOM2P54296 1465 aa10.62□□□□□ -0.71
BDNF-206ENST00000395983 CHD1O14646 1710 aa10.61□□□□□ -0.71
BDNF-206ENST00000395983 POLR3AO14802 1390 aaPredicted RBP10.61□□□□□ -0.71
BDNF-206ENST00000395983 SBNO2Q9Y2G9 1366 aa10.61□□□□□ -0.71
BDNF-206ENST00000395983 CLUAP1Q96AJ1 413 aa10.61□□□□□ -0.71
BDNF-206ENST00000395983 CCDC146Q8IYE0 955 aa10.6□□□□□ -0.71
BDNF-206ENST00000395983 DEPDC5O75140 1603 aa10.6□□□□□ -0.71
BDNF-206ENST00000395983 CLTCL1P53675 1640 aa10.59□□□□□ -0.71
BDNF-206ENST00000395983 TRAPPC8Q9Y2L5 1435 aa10.59□□□□□ -0.71
BDNF-206ENST00000395983 NCBP3Q53F19 620 aaKnown RBP10.59□□□□□ -0.71
BDNF-206ENST00000395983 MYOM1P52179 1685 aa10.59□□□□□ -0.71
BDNF-206ENST00000395983 ZCCHC11Q5TAX3 1644 aaKnown RBP10.59□□□□□ -0.71
BDNF-206ENST00000395983 ZFYVE16Q7Z3T8 1539 aa10.59□□□□□ -0.71
BDNF-206ENST00000395983 KIF1BO60333 1816 aa10.58□□□□□ -0.72
BDNF-206ENST00000395983 MORC1Q86VD1 984 aa10.58□□□□□ -0.72
BDNF-206ENST00000395983 RUNDC1Q96C34 613 aa10.58□□□□□ -0.72
BDNF-206ENST00000395983 MAP3K4Q9Y6R4 1608 aa10.58□□□□□ -0.72
BDNF-206ENST00000395983 VIRMAQ69YN4 1812 aaKnown RBP10.58□□□□□ -0.72
BDNF-206ENST00000395983 WDR63Q8IWG1 891 aa10.57□□□□□ -0.72
BDNF-206ENST00000395983 RWDD1Q9H446 243 aaPredicted RBP10.57□□□□□ -0.72
BDNF-206ENST00000395983 MYH16Q9H6N6 1097 aa10.57□□□□□ -0.72
BDNF-206ENST00000395983 L1TD1Q5T7N2 865 aaKnown RBP10.57□□□□□ -0.72
BDNF-206ENST00000395983 ATP7AQ04656 1500 aa10.57□□□□□ -0.72
BDNF-206ENST00000395983 KIF3BO15066 747 aa10.56□□□□□ -0.72
BDNF-206ENST00000395983 CT47B1P0C2W7 299 aaPredicted RBP10.56□□□□□ -0.72
BDNF-206ENST00000395983 BCAR3O75815 825 aa10.56□□□□□ -0.72
BDNF-206ENST00000395983 WWC1Q8IX03 1113 aa10.56□□□□□ -0.72
BDNF-206ENST00000395983 IL27Q8NEV9 243 aa10.56□□□□□ -0.72
BDNF-206ENST00000395983 SLC4A3P48751 1232 aa10.55□□□□□ -0.72
BDNF-206ENST00000395983 FRAT1Q92837 279 aaPredicted RBP10.55□□□□□ -0.72
BDNF-206ENST00000395983 ERVK-7P63135 1459 aa10.55□□□□□ -0.72
BDNF-206ENST00000395983 VWDEQ8N2E2 1590 aa10.55□□□□□ -0.72
BDNF-206ENST00000395983 MYO3AQ8NEV4 1616 aa10.54□□□□□ -0.72
BDNF-206ENST00000395983 NSD2O96028 1365 aa10.54□□□□□ -0.72
BDNF-206ENST00000395983 CCDC27Q2M243 656 aa10.54□□□□□ -0.72
BDNF-206ENST00000395983 SKAP1Q86WV1 359 aa10.54□□□□□ -0.72
BDNF-206ENST00000395983 SETBP1Q9Y6X0 1596 aa10.54□□□□□ -0.72
BDNF-206ENST00000395983 CFAP70Q5T0N1 1121 aa10.54□□□□□ -0.72
BDNF-206ENST00000395983 PUS7Q96PZ0 661 aaKnown RBP10.54□□□□□ -0.72
BDNF-206ENST00000395983 AFAP1Q8N556 730 aa10.53□□□□□ -0.72
BDNF-206ENST00000395983 COG6Q9Y2V7 657 aa10.53□□□□□ -0.72
BDNF-206ENST00000395983 INO80Q9ULG1 1556 aaPredicted RBP10.53□□□□□ -0.72
BDNF-206ENST00000395983 ABCA6Q8N139 1617 aa10.53□□□□□ -0.72
BDNF-206ENST00000395983 RPGRIP1LQ68CZ1 1315 aa10.53□□□□□ -0.72
BDNF-206ENST00000395983 FANCAO15360 1455 aa10.52□□□□□ -0.72
BDNF-206ENST00000395983 FRAT2O75474 233 aaPredicted RBP10.52□□□□□ -0.73
BDNF-206ENST00000395983 NSD3Q9BZ95 1437 aa10.52□□□□□ -0.73
BDNF-206ENST00000395983 FTSJ3Q8IY81 847 aaKnown RBP10.52□□□□□ -0.73
BDNF-206ENST00000395983 RTN4Q9NQC3 1192 aaKnown RBP10.52□□□□□ -0.73
BDNF-206ENST00000395983 RARSP54136 660 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms