RNA–Protein interactions for RNA: ENST00000395757.5

SREBF1-205, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SREBF1, Length 3,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-205ENST00000395757 COG6Q9Y2V7 657 aa18.76■□□□□ 0.59
SREBF1-205ENST00000395757 ADGRL2O95490 1459 aa18.76■□□□□ 0.59
SREBF1-205ENST00000395757 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.75■□□□□ 0.59
SREBF1-205ENST00000395757 A2MP01023 1474 aa18.74■□□□□ 0.59
SREBF1-205ENST00000395757 PDE3BQ13370 1112 aa18.74■□□□□ 0.59
SREBF1-205ENST00000395757 DEKP35659 375 aaKnown RBP18.73■□□□□ 0.59
SREBF1-205ENST00000395757 GGNBP2Q9H3C7 697 aa18.73■□□□□ 0.59
SREBF1-205ENST00000395757 PANK1Q8TE04 598 aa18.73■□□□□ 0.59
SREBF1-205ENST00000395757 IPO9Q96P70 1041 aaKnown RBP18.73■□□□□ 0.59
SREBF1-205ENST00000395757 CFAP65Q6ZU64 1925 aaKnown RBP18.72■□□□□ 0.59
SREBF1-205ENST00000395757 NEFMP07197 916 aa18.72■□□□□ 0.59
SREBF1-205ENST00000395757 CENPJQ9HC77 1338 aaPredicted RBP18.72■□□□□ 0.59
SREBF1-205ENST00000395757 ABCA8O94911 1581 aa18.72■□□□□ 0.59
SREBF1-205ENST00000395757 CFAP53Q96M91 514 aa18.71■□□□□ 0.59
SREBF1-205ENST00000395757 MTHFSP49914 203 aa18.7■□□□□ 0.58
SREBF1-205ENST00000395757 CDC42BPAQ5VT25 1732 aa18.69■□□□□ 0.58
SREBF1-205ENST00000395757 SAMD9LQ8IVG5 1584 aa18.69■□□□□ 0.58
SREBF1-205ENST00000395757 TCERG1O14776 1098 aaKnown RBP18.69■□□□□ 0.58
SREBF1-205ENST00000395757 FBLN1P23142 703 aa18.69■□□□□ 0.58
SREBF1-205ENST00000395757 EIF3AQ14152 1382 aaKnown RBP18.68■□□□□ 0.58
SREBF1-205ENST00000395757 PLA2R1Q13018 1463 aa18.68■□□□□ 0.58
SREBF1-205ENST00000395757 SPRYD3Q8NCJ5 442 aa18.68■□□□□ 0.58
SREBF1-205ENST00000395757 SPINK5Q9NQ38 1064 aaPredicted RBP18.68■□□□□ 0.58
SREBF1-205ENST00000395757 PLCH2O75038 1416 aa18.68■□□□□ 0.58
SREBF1-205ENST00000395757 TTC37Q6PGP7 1564 aa18.67■□□□□ 0.58
SREBF1-205ENST00000395757 AMER1Q5JTC6 1135 aaPredicted RBP18.67■□□□□ 0.58
SREBF1-205ENST00000395757 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.67■□□□□ 0.583e-8■□□□□ 10.1
SREBF1-205ENST00000395757 ARHGEF12Q9NZN5 1544 aa18.67■□□□□ 0.58
SREBF1-205ENST00000395757 ELL2O00472 640 aaPredicted RBP18.67■□□□□ 0.58
SREBF1-205ENST00000395757 FTSJ3Q8IY81 847 aaKnown RBP18.65■□□□□ 0.58
SREBF1-205ENST00000395757 UHRF1BP1Q6BDS2 1440 aa18.65■□□□□ 0.58
SREBF1-205ENST00000395757 DMRT2Q9Y5R5 561 aa18.65■□□□□ 0.58
SREBF1-205ENST00000395757 FANCAO15360 1455 aa18.64■□□□□ 0.58
SREBF1-205ENST00000395757 CARD14Q9BXL6 1004 aa18.64■□□□□ 0.58
SREBF1-205ENST00000395757 PARD3Q8TEW0 1356 aa18.64■□□□□ 0.57
SREBF1-205ENST00000395757 KDM5CP41229 1560 aa18.64■□□□□ 0.57
SREBF1-205ENST00000395757 ADGRL1O94910 1474 aa18.64■□□□□ 0.57
SREBF1-205ENST00000395757 SHANK2Q9UPX8 1470 aa18.63■□□□□ 0.57
SREBF1-205ENST00000395757 MAPK8IP3Q9UPT6 1336 aa18.63■□□□□ 0.57
SREBF1-205ENST00000395757 TCP11L2Q8N4U5 519 aa18.63■□□□□ 0.57
SREBF1-205ENST00000395757 ADGBQ8N7X0 1667 aa18.63■□□□□ 0.57
SREBF1-205ENST00000395757 FBXO31Q5XUX0 539 aaPredicted RBP18.62■□□□□ 0.57
SREBF1-205ENST00000395757 PLEKHH1Q9ULM0 1364 aa18.61■□□□□ 0.57
SREBF1-205ENST00000395757 TSR2Q969E8 191 aaKnown RBP18.61■□□□□ 0.57
SREBF1-205ENST00000395757 DUSP27Q5VZP5 1158 aa18.6■□□□□ 0.57
SREBF1-205ENST00000395757 FAM69CQ0P6D2 419 aa18.6■□□□□ 0.57
SREBF1-205ENST00000395757 NOS1P29475 1434 aa18.59■□□□□ 0.57
SREBF1-205ENST00000395757 TNNQ9UQP3 1299 aa18.59■□□□□ 0.57
SREBF1-205ENST00000395757 UGGT1Q9NYU2 1555 aa18.58■□□□□ 0.56
SREBF1-205ENST00000395757 LRPPRCP42704 1394 aaKnown RBP18.58■□□□□ 0.56
SREBF1-205ENST00000395757 CHD1O14646 1710 aa18.57■□□□□ 0.56
SREBF1-205ENST00000395757 ABCC2Q92887 1545 aa18.57■□□□□ 0.56
SREBF1-205ENST00000395757 ZBTB7CA1YPR0 619 aa18.57■□□□□ 0.56
SREBF1-205ENST00000395757 IDI1Q13907 227 aa18.57■□□□□ 0.56
SREBF1-205ENST00000395757 PRAM1Q96QH2 718 aa18.57■□□□□ 0.56
SREBF1-205ENST00000395757 VGFO15240 615 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-205ENST00000395757 SLKQ9H2G2 1235 aaPredicted RBP18.56■□□□□ 0.56
SREBF1-205ENST00000395757 HMOX1P09601 288 aa18.56■□□□□ 0.56
SREBF1-205ENST00000395757 E9PSI1 815 aa18.55■□□□□ 0.56
SREBF1-205ENST00000395757 SMC4Q9NTJ3 1288 aa18.55■□□□□ 0.56
SREBF1-205ENST00000395757 NSD3Q9BZ95 1437 aa18.55■□□□□ 0.56
SREBF1-205ENST00000395757 CGNL1Q0VF96 1302 aa18.55■□□□□ 0.56
SREBF1-205ENST00000395757 SLFN5Q08AF3 891 aa18.54■□□□□ 0.56
SREBF1-205ENST00000395757 ASXL2Q76L83 1435 aa18.54■□□□□ 0.56
SREBF1-205ENST00000395757 DUOX2Q9NRD8 1548 aa18.54■□□□□ 0.56
SREBF1-205ENST00000395757 ITPRIPQ8IWB1 547 aa18.54■□□□□ 0.56
SREBF1-205ENST00000395757 EVC2Q86UK5 1308 aa18.54■□□□□ 0.56
SREBF1-205ENST00000395757 BACH2Q9BYV9 841 aa18.54■□□□□ 0.56
SREBF1-205ENST00000395757 COL17A1Q9UMD9 1497 aaPredicted RBP18.53■□□□□ 0.56
SREBF1-205ENST00000395757 WAPLQ7Z5K2 1190 aa18.53■□□□□ 0.56
SREBF1-205ENST00000395757 C14orf37Q86TY3 774 aa18.53■□□□□ 0.56
SREBF1-205ENST00000395757 CD109Q6YHK3 1445 aa18.52■□□□□ 0.56
SREBF1-205ENST00000395757 MAGI2Q86UL8 1455 aa18.52■□□□□ 0.56
SREBF1-205ENST00000395757 WWC1Q8IX03 1113 aa18.52■□□□□ 0.55
SREBF1-205ENST00000395757 CDC42BPBQ9Y5S2 1711 aa18.51■□□□□ 0.55
SREBF1-205ENST00000395757 APBB1O00213 710 aa18.51■□□□□ 0.55
SREBF1-205ENST00000395757 SCAF11Q99590 1463 aaKnown RBP18.51■□□□□ 0.55
SREBF1-205ENST00000395757 CENPQQ7L2Z9 268 aaPredicted RBP18.5■□□□□ 0.55
SREBF1-205ENST00000395757 CABP1Q9NZU7 370 aa18.5■□□□□ 0.55
SREBF1-205ENST00000395757 A0A0U1RQG5 324 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-205ENST00000395757 RUNDC1Q96C34 613 aa18.49■□□□□ 0.55
SREBF1-205ENST00000395757 KDM5DQ9BY66 1539 aa18.49■□□□□ 0.55
SREBF1-205ENST00000395757 THUMPD2Q9BTF0 503 aaKnown RBP18.49■□□□□ 0.55
SREBF1-205ENST00000395757 HDGFL2Q7Z4V5 671 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-205ENST00000395757 UPF2Q9HAU5 1272 aaKnown RBP18.47■□□□□ 0.55
SREBF1-205ENST00000395757 RNF123Q5XPI4 1314 aa18.47■□□□□ 0.55
SREBF1-205ENST00000395757 RIPK4P57078 832 aa18.46■□□□□ 0.55
SREBF1-205ENST00000395757 ARHGEF5Q12774 1597 aa18.46■□□□□ 0.55
SREBF1-205ENST00000395757 IGHDP01880 384 aa18.46■□□□□ 0.55
SREBF1-205ENST00000395757 DDRGK1Q96HY6 314 aa18.46■□□□□ 0.55
SREBF1-205ENST00000395757 EXOSC9Q06265 439 aaKnown RBP18.45■□□□□ 0.54
SREBF1-205ENST00000395757 TERF2IPQ9NYB0 399 aa18.45■□□□□ 0.54
SREBF1-205ENST00000395757 PREX2Q70Z35 1606 aa18.45■□□□□ 0.54
SREBF1-205ENST00000395757 WDR7Q9Y4E6 1490 aa18.45■□□□□ 0.54
SREBF1-205ENST00000395757 TXNDC2Q86VQ3 553 aa18.45■□□□□ 0.54
SREBF1-205ENST00000395757 GPRASP1Q5JY77 1395 aa18.45■□□□□ 0.54
SREBF1-205ENST00000395757 ADCY10Q96PN6 1610 aa18.45■□□□□ 0.54
SREBF1-205ENST00000395757 CROCC2H7BZ55 1655 aa18.44■□□□□ 0.54
SREBF1-205ENST00000395757 FAM161AQ3B820 660 aa18.44■□□□□ 0.54
SREBF1-205ENST00000395757 AEBP2Q6ZN18 517 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms