RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 GPRASP1Q5JY77 1395 aa24.53■■□□□ 1.52
PCDHA1-202ENST00000394633 NBPF1Q3BBV0 1214 aa24.53■■□□□ 1.52
PCDHA1-202ENST00000394633 TET3O43151 1660 aa24.53■■□□□ 1.52
PCDHA1-202ENST00000394633 PAK3O75914 559 aaPredicted RBP24.53■■□□□ 1.52
PCDHA1-202ENST00000394633 CEP152O94986 1710 aa24.52■■□□□ 1.52
PCDHA1-202ENST00000394633 PER1O15534 1290 aaPredicted RBP24.51■■□□□ 1.51
PCDHA1-202ENST00000394633 GGT6Q6P531 493 aa24.51■■□□□ 1.51
PCDHA1-202ENST00000394633 KANK1Q14678 1352 aa24.51■■□□□ 1.51
PCDHA1-202ENST00000394633 RGL3Q3MIN7 710 aa24.5■■□□□ 1.51
PCDHA1-202ENST00000394633 RCAN3Q9UKA8 241 aa24.49■■□□□ 1.51
PCDHA1-202ENST00000394633 ATP10AO60312 1499 aa24.48■■□□□ 1.51
PCDHA1-202ENST00000394633 TRHP20396 242 aaPredicted RBP24.47■■□□□ 1.51
PCDHA1-202ENST00000394633 EXOC6Q8TAG9 804 aa24.47■■□□□ 1.51
PCDHA1-202ENST00000394633 SIGLEC1Q9BZZ2 1709 aa24.47■■□□□ 1.51
PCDHA1-202ENST00000394633 SALL2Q9Y467 1007 aaPredicted RBP24.47■■□□□ 1.51
PCDHA1-202ENST00000394633 DISP3Q9P2K9 1392 aa24.46■■□□□ 1.51
PCDHA1-202ENST00000394633 EFCAB6Q5THR3 1501 aa24.46■■□□□ 1.51
PCDHA1-202ENST00000394633 ANP32AP39687 249 aaKnown RBP24.46■■□□□ 1.51
PCDHA1-202ENST00000394633 PDE3BQ13370 1112 aa24.46■■□□□ 1.51
PCDHA1-202ENST00000394633 SPHKAPQ2M3C7 1700 aa24.45■■□□□ 1.5
PCDHA1-202ENST00000394633 IPO9Q96P70 1041 aaKnown RBP24.45■■□□□ 1.5
PCDHA1-202ENST00000394633 TESK2Q96S53 571 aa24.45■■□□□ 1.5
PCDHA1-202ENST00000394633 LMTK2Q8IWU2 1503 aa24.43■■□□□ 1.5
PCDHA1-202ENST00000394633 ABCC3O15438 1527 aa24.41■■□□□ 1.5
PCDHA1-202ENST00000394633 ARHGEF40Q8TER5 1519 aa24.41■■□□□ 1.5
PCDHA1-202ENST00000394633 WASHC2CQ9Y4E1 1318 aa24.41■■□□□ 1.5
PCDHA1-202ENST00000394633 BLMP54132 1417 aaPredicted RBP24.41■■□□□ 1.5
PCDHA1-202ENST00000394633 TRPM2O94759 1503 aa24.41■■□□□ 1.5
PCDHA1-202ENST00000394633 PTPRTO14522 1441 aa24.4■■□□□ 1.5
PCDHA1-202ENST00000394633 CC2D1BQ5T0F9 858 aaKnown RBP24.39■■□□□ 1.5
PCDHA1-202ENST00000394633 CDCA7LQ96GN5 454 aa24.39■■□□□ 1.5
PCDHA1-202ENST00000394633 CFAP65Q6ZU64 1925 aaKnown RBP24.39■■□□□ 1.5
PCDHA1-202ENST00000394633 INSRP06213 1382 aa24.39■■□□□ 1.49
PCDHA1-202ENST00000394633 CLTCL1P53675 1640 aa24.38■■□□□ 1.49
PCDHA1-202ENST00000394633 UGGT1Q9NYU2 1555 aa24.38■■□□□ 1.49
PCDHA1-202ENST00000394633 DEKP35659 375 aaKnown RBP24.38■■□□□ 1.49
PCDHA1-202ENST00000394633 NPATQ14207 1427 aa24.37■■□□□ 1.49
PCDHA1-202ENST00000394633 REREQ9P2R6 1566 aa24.37■■□□□ 1.49
PCDHA1-202ENST00000394633 PANK3Q9H999 370 aa24.37■■□□□ 1.49
PCDHA1-202ENST00000394633 NBR1Q14596 966 aa24.37■■□□□ 1.49
PCDHA1-202ENST00000394633 CAMSAP1Q5T5Y3 1602 aa24.36■■□□□ 1.49
PCDHA1-202ENST00000394633 TCERG1O14776 1098 aaKnown RBP24.34■■□□□ 1.49
PCDHA1-202ENST00000394633 ZBTB47Q9UFB7 747 aaPredicted RBP24.34■■□□□ 1.49
PCDHA1-202ENST00000394633 TMF1P82094 1093 aa24.33■■□□□ 1.48
PCDHA1-202ENST00000394633 AGLP35573 1532 aa24.31■■□□□ 1.48
PCDHA1-202ENST00000394633 ZC3H13Q5T200 1668 aaKnown RBP24.3■■□□□ 1.48
PCDHA1-202ENST00000394633 IQGAP1P46940 1657 aa24.29■■□□□ 1.48
PCDHA1-202ENST00000394633 MADDQ8WXG6 1647 aa24.28■■□□□ 1.48
PCDHA1-202ENST00000394633 PLIN1O60240 522 aa24.27■■□□□ 1.48
PCDHA1-202ENST00000394633 PDE4AP27815 886 aa24.26■■□□□ 1.47
PCDHA1-202ENST00000394633 MLECQ14165 292 aa24.26■■□□□ 1.47
PCDHA1-202ENST00000394633 MS4A1P11836 297 aa24.25■■□□□ 1.47
PCDHA1-202ENST00000394633 BACH2Q9BYV9 841 aa24.24■■□□□ 1.47
PCDHA1-202ENST00000394633 CRBNQ96SW2 442 aa24.23■■□□□ 1.47
PCDHA1-202ENST00000394633 NPM2Q86SE8 214 aaKnown RBP24.22■■□□□ 1.47
PCDHA1-202ENST00000394633 MROH2AA6NES4 1674 aa24.22■■□□□ 1.47
PCDHA1-202ENST00000394633 SYNMO15061 1565 aa24.21■■□□□ 1.47
PCDHA1-202ENST00000394633 CLTCQ00610 1675 aaKnown RBP24.21■■□□□ 1.47
PCDHA1-202ENST00000394633 NOS1P29475 1434 aa24.21■■□□□ 1.47
PCDHA1-202ENST00000394633 ARHGAP31Q2M1Z3 1444 aa24.21■■□□□ 1.47
PCDHA1-202ENST00000394633 ADAMTS8Q9UP79 889 aa24.2■■□□□ 1.47
PCDHA1-202ENST00000394633 KIF1BO60333 1816 aa24.19■■□□□ 1.46
PCDHA1-202ENST00000394633 PREX1Q8TCU6 1659 aa24.16■■□□□ 1.46
PCDHA1-202ENST00000394633 PPP2R1AP30153 589 aa24.16■■□□□ 1.46
PCDHA1-202ENST00000394633 MYOM1P52179 1685 aa24.16■■□□□ 1.46
PCDHA1-202ENST00000394633 PIK3C2BO00750 1634 aa24.15■■□□□ 1.46
PCDHA1-202ENST00000394633 FBXO31Q5XUX0 539 aaPredicted RBP24.15■■□□□ 1.46
PCDHA1-202ENST00000394633 PLEKHH1Q9ULM0 1364 aa24.14■■□□□ 1.46
PCDHA1-202ENST00000394633 KNSTRNQ9Y448 316 aa24.14■■□□□ 1.46
PCDHA1-202ENST00000394633 ADGRB3O60242 1522 aa24.14■■□□□ 1.46
PCDHA1-202ENST00000394633 RTL5Q5HYW3 569 aaPredicted RBP24.14■■□□□ 1.45
PCDHA1-202ENST00000394633 AMER1Q5JTC6 1135 aaPredicted RBP24.14■■□□□ 1.45
PCDHA1-202ENST00000394633 C20orf194Q5TEA3 1177 aa24.14■■□□□ 1.45
PCDHA1-202ENST00000394633 SKAP1Q86WV1 359 aa24.13■■□□□ 1.45
PCDHA1-202ENST00000394633 NEURL4Q96JN8 1562 aa24.13■■□□□ 1.45
PCDHA1-202ENST00000394633 SCAF11Q99590 1463 aaKnown RBP24.12■■□□□ 1.45
PCDHA1-202ENST00000394633 ASXL1Q8IXJ9 1541 aa24.11■■□□□ 1.45
PCDHA1-202ENST00000394633 CHGAP10645 457 aaKnown RBP24.1■■□□□ 1.45
PCDHA1-202ENST00000394633 WDR43Q15061 677 aaKnown RBP eCLIP24.1■■□□□ 1.45
PCDHA1-202ENST00000394633 DUSP27Q5VZP5 1158 aa24.1■■□□□ 1.45
PCDHA1-202ENST00000394633 ZNF521Q96K83 1311 aa24.1■■□□□ 1.45
PCDHA1-202ENST00000394633 PPP6R1Q9UPN7 881 aa24.1■■□□□ 1.45
PCDHA1-202ENST00000394633 IFT172Q9UG01 1749 aa24.1■■□□□ 1.45
PCDHA1-202ENST00000394633 ERVK-7P63135 1459 aa24.09■■□□□ 1.45
PCDHA1-202ENST00000394633 KDM2BQ8NHM5 1336 aa24.07■■□□□ 1.44
PCDHA1-202ENST00000394633 PIK3C2GO75747 1445 aa24.07■■□□□ 1.44
PCDHA1-202ENST00000394633 IDI1Q13907 227 aa24.07■■□□□ 1.44
PCDHA1-202ENST00000394633 KIAA1210Q9ULL0 1709 aa24.07■■□□□ 1.44
PCDHA1-202ENST00000394633 CDCA8Q53HL2 280 aa24.06■■□□□ 1.44
PCDHA1-202ENST00000394633 KDM5AP29375 1690 aaKnown RBP24.06■■□□□ 1.44
PCDHA1-202ENST00000394633 MYO5BQ9ULV0 1848 aa24.04■■□□□ 1.44
PCDHA1-202ENST00000394633 GOLGA2Q08379 1002 aa24.03■■□□□ 1.44
PCDHA1-202ENST00000394633 STAC3Q96MF2 364 aa24.03■■□□□ 1.44
PCDHA1-202ENST00000394633 ADGRF5Q8IZF2 1346 aa24.03■■□□□ 1.44
PCDHA1-202ENST00000394633 ZMYM3Q14202 1370 aa24.02■■□□□ 1.44
PCDHA1-202ENST00000394633 NPC1L1Q9UHC9 1359 aa24.02■■□□□ 1.44
PCDHA1-202ENST00000394633 LAS1LQ9Y4W2 734 aaKnown RBP24.02■■□□□ 1.44
PCDHA1-202ENST00000394633 PPLO60437 1756 aa24.02■■□□□ 1.44
PCDHA1-202ENST00000394633 SPATA31D1Q6ZQQ2 1576 aa24.02■■□□□ 1.44
PCDHA1-202ENST00000394633 MYOM2P54296 1465 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms