RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 SHANK2Q9UPX8 1470 aa10.03□□□□□ -0.8
RTN4-205ENST00000394609 MYO5CQ9NQX4 1742 aa10.03□□□□□ -0.8
RTN4-205ENST00000394609 CABP2Q9NPB3 220 aa10.02□□□□□ -0.8
RTN4-205ENST00000394609 PLEKHH2Q8IVE3 1493 aa10.02□□□□□ -0.81
RTN4-205ENST00000394609 RIMBP3CA6NJZ7 1639 aa10.02□□□□□ -0.81
RTN4-205ENST00000394609 RIMBP3BA6NNM3 1639 aa10.02□□□□□ -0.81
RTN4-205ENST00000394609 RIMBP3Q9UFD9 1639 aa10.02□□□□□ -0.81
RTN4-205ENST00000394609 ARHGEF5Q12774 1597 aa10.02□□□□□ -0.81
RTN4-205ENST00000394609 TRAPPC8Q9Y2L5 1435 aa10.01□□□□□ -0.81
RTN4-205ENST00000394609 FANCAO15360 1455 aa10.01□□□□□ -0.81
RTN4-205ENST00000394609 DENND4BO75064 1496 aaPredicted RBP10.01□□□□□ -0.81
RTN4-205ENST00000394609 CROCC2H7BZ55 1655 aa10□□□□□ -0.81
RTN4-205ENST00000394609 CD109Q6YHK3 1445 aa10□□□□□ -0.81
RTN4-205ENST00000394609 CENPBP07199 599 aaPredicted RBP10□□□□□ -0.81
RTN4-205ENST00000394609 ABCA9Q8IUA7 1624 aa9.99□□□□□ -0.81
RTN4-205ENST00000394609 SPAG9O60271 1321 aaKnown RBP9.99□□□□□ -0.81
RTN4-205ENST00000394609 ZNF316A6NFI3 1004 aaPredicted RBP9.98□□□□□ -0.81
RTN4-205ENST00000394609 MYT1LQ9UL68 1186 aa9.98□□□□□ -0.81
RTN4-205ENST00000394609 NUP155O75694 1391 aa9.98□□□□□ -0.81
RTN4-205ENST00000394609 ADGBQ8N7X0 1667 aa9.98□□□□□ -0.81
RTN4-205ENST00000394609 SCAPERQ9BY12 1400 aa9.98□□□□□ -0.81
RTN4-205ENST00000394609 ABCC1P33527 1531 aa9.98□□□□□ -0.81
RTN4-205ENST00000394609 ARAP3Q8WWN8 1544 aa9.97□□□□□ -0.81
RTN4-205ENST00000394609 PKD2Q13563 968 aa9.97□□□□□ -0.81
RTN4-205ENST00000394609 ADGRL1O94910 1474 aa9.96□□□□□ -0.81
RTN4-205ENST00000394609 PZPP20742 1482 aa9.96□□□□□ -0.81
RTN4-205ENST00000394609 TONSLQ96HA7 1378 aa9.96□□□□□ -0.81
RTN4-205ENST00000394609 TIMELESSQ9UNS1 1208 aa9.96□□□□□ -0.81
RTN4-205ENST00000394609 BOLA1Q9Y3E2 137 aa9.96□□□□□ -0.81
RTN4-205ENST00000394609 FAM69CQ0P6D2 419 aa9.96□□□□□ -0.82
RTN4-205ENST00000394609 ANKRD30BQ9BXX2 1392 aa9.95□□□□□ -0.82
RTN4-205ENST00000394609 PPP1R15AO75807 674 aaPredicted RBP9.95□□□□□ -0.82
RTN4-205ENST00000394609 MAST1Q9Y2H9 1570 aa9.94□□□□□ -0.82
RTN4-205ENST00000394609 RAPGEF3O95398 923 aa9.92□□□□□ -0.82
RTN4-205ENST00000394609 DPY19L2Q6NUT2 758 aa9.92□□□□□ -0.82
RTN4-205ENST00000394609 RTEL1-TNFRSF6BF6WH68 1400 aa9.92□□□□□ -0.82
RTN4-205ENST00000394609 RIOK3O14730 519 aaKnown RBP9.91□□□□□ -0.82
RTN4-205ENST00000394609 DIEXFQ68CQ4 756 aaKnown RBP9.91□□□□□ -0.82
RTN4-205ENST00000394609 L3MBTL2Q969R5 705 aa9.91□□□□□ -0.82
RTN4-205ENST00000394609 DUOX2Q9NRD8 1548 aa9.9□□□□□ -0.82
RTN4-205ENST00000394609 EMP3P54852 163 aa9.9□□□□□ -0.82
RTN4-205ENST00000394609 ZFYVE16Q7Z3T8 1539 aa9.9□□□□□ -0.82
RTN4-205ENST00000394609 PLXNC1O60486 1568 aa9.9□□□□□ -0.83
RTN4-205ENST00000394609 EFCAB3Q8N7B9 438 aa9.89□□□□□ -0.83
RTN4-205ENST00000394609 KIF3BO15066 747 aa9.89□□□□□ -0.83
RTN4-205ENST00000394609 VGFO15240 615 aaPredicted RBP9.89□□□□□ -0.83
RTN4-205ENST00000394609 MARVELD3Q96A59 401 aa9.89□□□□□ -0.83
RTN4-205ENST00000394609 TAOK2Q9UL54 1235 aa9.89□□□□□ -0.83
RTN4-205ENST00000394609 ERBINQ96RT1 1412 aa9.89□□□□□ -0.83
RTN4-205ENST00000394609 ATP7AQ04656 1500 aa9.88□□□□□ -0.83
RTN4-205ENST00000394609 ZNF518AQ6AHZ1 1483 aa9.88□□□□□ -0.83
RTN4-205ENST00000394609 SOX12O15370 315 aa9.88□□□□□ -0.83
RTN4-205ENST00000394609 FAM135AQ9P2D6 1515 aa9.88□□□□□ -0.83
RTN4-205ENST00000394609 POGZQ7Z3K3 1410 aa9.87□□□□□ -0.83
RTN4-205ENST00000394609 KDM5DQ9BY66 1539 aa9.87□□□□□ -0.83
RTN4-205ENST00000394609 RPRD2Q5VT52 1461 aaKnown RBP9.87□□□□□ -0.83
RTN4-205ENST00000394609 NEO1Q92859 1461 aa9.87□□□□□ -0.83
RTN4-205ENST00000394609 HIRIP3Q9BW71 556 aaPredicted RBP9.87□□□□□ -0.83
RTN4-205ENST00000394609 DHX29Q7Z478 1369 aaKnown RBP9.86□□□□□ -0.83
RTN4-205ENST00000394609 GLI2P10070 1586 aa9.85□□□□□ -0.83
RTN4-205ENST00000394609 INO80Q9ULG1 1556 aaPredicted RBP9.85□□□□□ -0.83
RTN4-205ENST00000394609 DOK7Q18PE1 504 aa9.85□□□□□ -0.83
RTN4-205ENST00000394609 GTF3C3Q9Y5Q9 886 aa9.85□□□□□ -0.83
RTN4-205ENST00000394609 MAP3K4Q9Y6R4 1608 aa9.84□□□□□ -0.83
RTN4-205ENST00000394609 CFAP74Q9C0B2 1584 aa9.84□□□□□ -0.83
RTN4-205ENST00000394609 DIP2BQ9P265 1576 aa9.84□□□□□ -0.83
RTN4-205ENST00000394609 NBPF8Q3BBV2 869 aa9.83□□□□□ -0.84
RTN4-205ENST00000394609 UNC13BO14795 1591 aa9.83□□□□□ -0.84
RTN4-205ENST00000394609 MLH3Q9UHC1 1453 aa9.83□□□□□ -0.84
RTN4-205ENST00000394609 ZNF326Q5BKZ1 582 aaKnown RBP9.83□□□□□ -0.84
RTN4-205ENST00000394609 GGT6Q6P531 493 aa9.83□□□□□ -0.84
RTN4-205ENST00000394609 ZNF710Q8N1W2 664 aa9.83□□□□□ -0.84
RTN4-205ENST00000394609 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.82□□□□□ -0.84
RTN4-205ENST00000394609 RGL3Q3MIN7 710 aa9.82□□□□□ -0.84
RTN4-205ENST00000394609 ZFP91Q96JP5 570 aaPredicted RBP9.82□□□□□ -0.84
RTN4-205ENST00000394609 KDM2AQ9Y2K7 1162 aa9.82□□□□□ -0.84
RTN4-205ENST00000394609 KIDINS220Q9ULH0 1771 aa9.82□□□□□ -0.84
RTN4-205ENST00000394609 KANK1Q14678 1352 aa9.82□□□□□ -0.84
RTN4-205ENST00000394609 A2MP01023 1474 aa9.82□□□□□ -0.84
RTN4-205ENST00000394609 PLA2R1Q13018 1463 aa9.82□□□□□ -0.84
RTN4-205ENST00000394609 MAGI2Q86UL8 1455 aa9.82□□□□□ -0.84
RTN4-205ENST00000394609 TEX14Q8IWB6 1497 aa9.82□□□□□ -0.84
RTN4-205ENST00000394609 KDM5CP41229 1560 aa9.81□□□□□ -0.84
RTN4-205ENST00000394609 RIMBP2O15034 1052 aa9.81□□□□□ -0.84
RTN4-205ENST00000394609 SPNS2Q8IVW8 549 aa9.81□□□□□ -0.84
RTN4-205ENST00000394609 HS3ST6Q96QI5 342 aa9.81□□□□□ -0.84
RTN4-205ENST00000394609 CCDC144AA2RUR9 1427 aa9.8□□□□□ -0.84
RTN4-205ENST00000394609 IQGAP3Q86VI3 1631 aa9.8□□□□□ -0.84
RTN4-205ENST00000394609 HOXB3P14651 431 aaPredicted RBP9.8□□□□□ -0.84
RTN4-205ENST00000394609 DCAF11Q8TEB1 546 aa9.8□□□□□ -0.84
RTN4-205ENST00000394609 YEATS2Q9ULM3 1422 aa9.8□□□□□ -0.84
RTN4-205ENST00000394609 FAM205CA6NFA0 338 aa9.79□□□□□ -0.84
RTN4-205ENST00000394609 RNF25Q96BH1 459 aaPredicted RBP9.79□□□□□ -0.84
RTN4-205ENST00000394609 TSPOAP1O95153 1857 aa9.79□□□□□ -0.84
RTN4-205ENST00000394609 HECW2Q9P2P5 1572 aa9.79□□□□□ -0.84
RTN4-205ENST00000394609 MICALL2Q8IY33 904 aa9.79□□□□□ -0.84
RTN4-205ENST00000394609 HOXB1P14653 301 aaPredicted RBP9.78□□□□□ -0.84
RTN4-205ENST00000394609 MMRN1Q13201 1228 aa9.78□□□□□ -0.84
RTN4-205ENST00000394609 HSPA5P11021 654 aaKnown RBP9.77□□□□□ -0.85
RTN4-205ENST00000394609 FRMPD1Q5SYB0 1578 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms