RNA–Protein interactions for RNA: ENST00000393879.3

NKIRAS2-203, Transcript of NFKB inhibitor interacting Ras like 2, humanhuman

TSL 1 (best)

Gene NKIRAS2, Length 4,213 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKIRAS2-203ENST00000393879 POLR1AO95602 1720 aaPredicted RBP12.82□□□□□ -0.36
NKIRAS2-203ENST00000393879 SPATA31E1Q6ZUB1 1445 aa12.82□□□□□ -0.36
NKIRAS2-203ENST00000393879 FTSJ3Q8IY81 847 aaKnown RBP12.81□□□□□ -0.36
NKIRAS2-203ENST00000393879 RAPGEF3O95398 923 aa12.81□□□□□ -0.36
NKIRAS2-203ENST00000393879 TERF2IPQ9NYB0 399 aa12.81□□□□□ -0.36
NKIRAS2-203ENST00000393879 CGNL1Q0VF96 1302 aa12.81□□□□□ -0.36
NKIRAS2-203ENST00000393879 DDRGK1Q96HY6 314 aa12.8□□□□□ -0.36
NKIRAS2-203ENST00000393879 DISP3Q9P2K9 1392 aa12.8□□□□□ -0.36
NKIRAS2-203ENST00000393879 DHX29Q7Z478 1369 aaKnown RBP12.8□□□□□ -0.36
NKIRAS2-203ENST00000393879 CD109Q6YHK3 1445 aa12.8□□□□□ -0.36
NKIRAS2-203ENST00000393879 HDGFP51858 240 aaKnown RBP12.8□□□□□ -0.36
NKIRAS2-203ENST00000393879 PNNQ9H307 717 aaKnown RBP12.8□□□□□ -0.36
NKIRAS2-203ENST00000393879 CRBNQ96SW2 442 aa12.79□□□□□ -0.36
NKIRAS2-203ENST00000393879 FAM69CQ0P6D2 419 aa12.79□□□□□ -0.36
NKIRAS2-203ENST00000393879 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.78□□□□□ -0.36
NKIRAS2-203ENST00000393879 WDR7Q9Y4E6 1490 aa12.78□□□□□ -0.36
NKIRAS2-203ENST00000393879 LAS1LQ9Y4W2 734 aaKnown RBP12.78□□□□□ -0.36
NKIRAS2-203ENST00000393879 SAMD9LQ8IVG5 1584 aa12.78□□□□□ -0.36
NKIRAS2-203ENST00000393879 RRP7AQ9Y3A4 280 aaKnown RBP12.77□□□□□ -0.36
NKIRAS2-203ENST00000393879 FANCIQ9NVI1 1328 aa12.77□□□□□ -0.36
NKIRAS2-203ENST00000393879 E9PSI1 815 aa12.77□□□□□ -0.36
NKIRAS2-203ENST00000393879 MINK1Q8N4C8 1332 aaPredicted RBP12.77□□□□□ -0.37
NKIRAS2-203ENST00000393879 PLXNC1O60486 1568 aa12.76□□□□□ -0.37
NKIRAS2-203ENST00000393879 ASXL2Q76L83 1435 aa12.76□□□□□ -0.37
NKIRAS2-203ENST00000393879 MYH16Q9H6N6 1097 aa12.76□□□□□ -0.37
NKIRAS2-203ENST00000393879 ADGRF5Q8IZF2 1346 aa12.76□□□□□ -0.37
NKIRAS2-203ENST00000393879 TESK2Q96S53 571 aa12.76□□□□□ -0.37
NKIRAS2-203ENST00000393879 SCAF11Q99590 1463 aaKnown RBP12.76□□□□□ -0.37
NKIRAS2-203ENST00000393879 MS4A1P11836 297 aa12.75□□□□□ -0.37
NKIRAS2-203ENST00000393879 NGEFQ8N5V2 710 aa12.75□□□□□ -0.37
NKIRAS2-203ENST00000393879 ZCCHC11Q5TAX3 1644 aaKnown RBP12.75□□□□□ -0.37
NKIRAS2-203ENST00000393879 A2MP01023 1474 aa12.75□□□□□ -0.37
NKIRAS2-203ENST00000393879 ABCA9Q8IUA7 1624 aa12.75□□□□□ -0.37
NKIRAS2-203ENST00000393879 RTEL1-TNFRSF6BF6WH68 1400 aa12.75□□□□□ -0.37
NKIRAS2-203ENST00000393879 SLC12A5Q9H2X9 1139 aa12.74□□□□□ -0.37
NKIRAS2-203ENST00000393879 DEPDC5O75140 1603 aa12.74□□□□□ -0.37
NKIRAS2-203ENST00000393879 MYO5CQ9NQX4 1742 aa12.74□□□□□ -0.37
NKIRAS2-203ENST00000393879 RPGRIP1LQ68CZ1 1315 aa12.73□□□□□ -0.37
NKIRAS2-203ENST00000393879 TTC37Q6PGP7 1564 aa12.73□□□□□ -0.37
NKIRAS2-203ENST00000393879 CABP2Q9NPB3 220 aa12.73□□□□□ -0.37
NKIRAS2-203ENST00000393879 UNC13BO14795 1591 aa12.73□□□□□ -0.37
NKIRAS2-203ENST00000393879 EIF2AK4Q9P2K8 1649 aaKnown RBP12.73□□□□□ -0.37
NKIRAS2-203ENST00000393879 PARD3Q8TEW0 1356 aa12.72□□□□□ -0.37
NKIRAS2-203ENST00000393879 MAGI2Q86UL8 1455 aa12.71□□□□□ -0.37
NKIRAS2-203ENST00000393879 IPO9Q96P70 1041 aaKnown RBP12.71□□□□□ -0.37
NKIRAS2-203ENST00000393879 SLC52A1Q9NWF4 448 aa12.71□□□□□ -0.37
NKIRAS2-203ENST00000393879 ERCC6L2Q5T890 1561 aa12.71□□□□□ -0.37
NKIRAS2-203ENST00000393879 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.71□□□□□ -0.38
NKIRAS2-203ENST00000393879 RUNDC1Q96C34 613 aa12.71□□□□□ -0.38
NKIRAS2-203ENST00000393879 PDE4AP27815 886 aa12.7□□□□□ -0.38
NKIRAS2-203ENST00000393879 CENPQQ7L2Z9 268 aaPredicted RBP12.7□□□□□ -0.38
NKIRAS2-203ENST00000393879 PER1O15534 1290 aaPredicted RBP12.7□□□□□ -0.38
NKIRAS2-203ENST00000393879 MTHFSP49914 203 aa12.7□□□□□ -0.38
NKIRAS2-203ENST00000393879 KDM5CP41229 1560 aa12.7□□□□□ -0.38
NKIRAS2-203ENST00000393879 CLUAP1Q96AJ1 413 aa12.69□□□□□ -0.38
NKIRAS2-203ENST00000393879 GPRASP1Q5JY77 1395 aa12.68□□□□□ -0.38
NKIRAS2-203ENST00000393879 ZNF518AQ6AHZ1 1483 aa12.68□□□□□ -0.38
NKIRAS2-203ENST00000393879 COL17A1Q9UMD9 1497 aaPredicted RBP12.68□□□□□ -0.38
NKIRAS2-203ENST00000393879 NOS1P29475 1434 aa12.68□□□□□ -0.38
NKIRAS2-203ENST00000393879 NEURL4Q96JN8 1562 aa12.68□□□□□ -0.38
NKIRAS2-203ENST00000393879 BECN1Q14457 450 aa12.68□□□□□ -0.38
NKIRAS2-203ENST00000393879 C14orf37Q86TY3 774 aa12.68□□□□□ -0.38
NKIRAS2-203ENST00000393879 GGNBP2Q9H3C7 697 aa12.68□□□□□ -0.38
NKIRAS2-203ENST00000393879 BCL2L13Q9BXK5 485 aa12.67□□□□□ -0.38
NKIRAS2-203ENST00000393879 SMC4Q9NTJ3 1288 aa12.67□□□□□ -0.38
NKIRAS2-203ENST00000393879 ATP7AQ04656 1500 aa12.66□□□□□ -0.38
NKIRAS2-203ENST00000393879 SOX12O15370 315 aa12.66□□□□□ -0.38
NKIRAS2-203ENST00000393879 AMER1Q5JTC6 1135 aaPredicted RBP12.66□□□□□ -0.38
NKIRAS2-203ENST00000393879 TCP11L2Q8N4U5 519 aa12.66□□□□□ -0.38
NKIRAS2-203ENST00000393879 COG6Q9Y2V7 657 aa12.66□□□□□ -0.38
NKIRAS2-203ENST00000393879 NSD3Q9BZ95 1437 aa12.66□□□□□ -0.38
NKIRAS2-203ENST00000393879 IPO8O15397 1037 aaKnown RBP12.65□□□□□ -0.38
NKIRAS2-203ENST00000393879 PMFBP1Q8TBY8 1022 aa12.65□□□□□ -0.38
NKIRAS2-203ENST00000393879 PRAM1Q96QH2 718 aa12.65□□□□□ -0.38
NKIRAS2-203ENST00000393879 RWDD1Q9H446 243 aaPredicted RBP12.65□□□□□ -0.38
NKIRAS2-203ENST00000393879 C14orf93Q9H972 538 aaKnown RBP12.64□□□□□ -0.39
NKIRAS2-203ENST00000393879 HSP90AA1P07900 732 aaKnown RBP12.64□□□□□ -0.39
NKIRAS2-203ENST00000393879 CALD1Q05682 793 aaKnown RBP12.64□□□□□ -0.39
NKIRAS2-203ENST00000393879 IDI1Q13907 227 aa12.64□□□□□ -0.39
NKIRAS2-203ENST00000393879 CHMP4BQ9H444 224 aaKnown RBP12.64□□□□□ -0.39
NKIRAS2-203ENST00000393879 DIAPH1O60610 1272 aaKnown RBP12.64□□□□□ -0.39
NKIRAS2-203ENST00000393879 ITPRIPQ8IWB1 547 aa12.64□□□□□ -0.39
NKIRAS2-203ENST00000393879 LRPPRCP42704 1394 aaKnown RBP12.63□□□□□ -0.39
NKIRAS2-203ENST00000393879 ABCC1P33527 1531 aa12.63□□□□□ -0.39
NKIRAS2-203ENST00000393879 VWDEQ8N2E2 1590 aa12.63□□□□□ -0.39
NKIRAS2-203ENST00000393879 PLA2R1Q13018 1463 aa12.63□□□□□ -0.39
NKIRAS2-203ENST00000393879 SLFN5Q08AF3 891 aa12.62□□□□□ -0.39
NKIRAS2-203ENST00000393879 INO80Q9ULG1 1556 aaPredicted RBP12.62□□□□□ -0.39
NKIRAS2-203ENST00000393879 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.62□□□□□ -0.39
NKIRAS2-203ENST00000393879 NUTM2FA1L443 756 aa12.61□□□□□ -0.39
NKIRAS2-203ENST00000393879 ASXL1Q8IXJ9 1541 aa12.61□□□□□ -0.39
NKIRAS2-203ENST00000393879 ZBTB7CA1YPR0 619 aa12.61□□□□□ -0.39
NKIRAS2-203ENST00000393879 EID1Q9Y6B2 187 aa12.61□□□□□ -0.39
NKIRAS2-203ENST00000393879 FAM161AQ3B820 660 aa12.61□□□□□ -0.39
NKIRAS2-203ENST00000393879 BCAR3O75815 825 aa12.6□□□□□ -0.39
NKIRAS2-203ENST00000393879 PLEKHG5O94827 1062 aa12.6□□□□□ -0.39
NKIRAS2-203ENST00000393879 TRHP20396 242 aaPredicted RBP12.6□□□□□ -0.39
NKIRAS2-203ENST00000393879 ZKSCAN2Q63HK3 967 aa12.6□□□□□ -0.39
NKIRAS2-203ENST00000393879 IQGAP3Q86VI3 1631 aa12.6□□□□□ -0.39
NKIRAS2-203ENST00000393879 RIPK4P57078 832 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms