RNA–Protein interactions for RNA: ENST00000393278.6

MBD4-202, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 1 (best) BASIC

Gene MBD4, Length 1,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-202ENST00000393278 SPATA31D1Q6ZQQ2 1576 aa24.49■■□□□ 1.51
MBD4-202ENST00000393278 FBXO31Q5XUX0 539 aaPredicted RBP24.49■■□□□ 1.51
MBD4-202ENST00000393278 PPLO60437 1756 aa24.48■■□□□ 1.51
MBD4-202ENST00000393278 ESF1Q9H501 851 aaKnown RBP24.46■■□□□ 1.51
MBD4-202ENST00000393278 ADGRF5Q8IZF2 1346 aa24.46■■□□□ 1.51
MBD4-202ENST00000393278 KIF7Q2M1P5 1343 aa24.45■■□□□ 1.5
MBD4-202ENST00000393278 ST20-MTHFSA0A0A6YYL1 179 aa24.45■■□□□ 1.5
MBD4-202ENST00000393278 ZMYM3Q14202 1370 aa24.44■■□□□ 1.5
MBD4-202ENST00000393278 TMEM131LA2VDJ0 1609 aa24.44■■□□□ 1.5
MBD4-202ENST00000393278 NEXMIFQ5QGS0 1516 aa24.43■■□□□ 1.5
MBD4-202ENST00000393278 IQGAP1P46940 1657 aa24.41■■□□□ 1.5
MBD4-202ENST00000393278 PIK3C2GO75747 1445 aa24.4■■□□□ 1.5
MBD4-202ENST00000393278 SCAF11Q99590 1463 aaKnown RBP24.38■■□□□ 1.49
MBD4-202ENST00000393278 MYO5BQ9ULV0 1848 aa24.38■■□□□ 1.49
MBD4-202ENST00000393278 CFAP70Q5T0N1 1121 aa24.37■■□□□ 1.49
MBD4-202ENST00000393278 ZFYVE9O95405 1425 aa24.36■■□□□ 1.49
MBD4-202ENST00000393278 VGFO15240 615 aaPredicted RBP24.35■■□□□ 1.49
MBD4-202ENST00000393278 SETBP1Q9Y6X0 1596 aa24.34■■□□□ 1.49
MBD4-202ENST00000393278 TESK2Q96S53 571 aa24.32■■□□□ 1.48
MBD4-202ENST00000393278 C14orf93Q9H972 538 aaKnown RBP24.32■■□□□ 1.48
MBD4-202ENST00000393278 A2ML1A8K2U0 1454 aa24.31■■□□□ 1.48
MBD4-202ENST00000393278 ANP32CO43423 234 aa24.3■■□□□ 1.48
MBD4-202ENST00000393278 TNRQ92752 1358 aa24.3■■□□□ 1.48
MBD4-202ENST00000393278 STAG3Q9UJ98 1225 aa24.3■■□□□ 1.48
MBD4-202ENST00000393278 EIF3AQ14152 1382 aaKnown RBP24.29■■□□□ 1.48
MBD4-202ENST00000393278 FER1L4A9Z1Z3 1794 aa24.29■■□□□ 1.48
MBD4-202ENST00000393278 ADGRB1O14514 1584 aa24.28■■□□□ 1.48
MBD4-202ENST00000393278 NUTM2DQ5VT03 806 aaPredicted RBP24.27■■□□□ 1.48
MBD4-202ENST00000393278 POLR3GLQ9BT43 218 aa24.25■■□□□ 1.47
MBD4-202ENST00000393278 C3P01024 1663 aa24.24■■□□□ 1.47
MBD4-202ENST00000393278 DISP3Q9P2K9 1392 aa24.24■■□□□ 1.47
MBD4-202ENST00000393278 KDM5AP29375 1690 aaKnown RBP24.23■■□□□ 1.47
MBD4-202ENST00000393278 TMF1P82094 1093 aa24.23■■□□□ 1.47
MBD4-202ENST00000393278 MYO3AQ8NEV4 1616 aa24.21■■□□□ 1.47
MBD4-202ENST00000393278 RIMS2Q9UQ26 1411 aa24.21■■□□□ 1.47
MBD4-202ENST00000393278 NLRP1Q9C000 1473 aa24.19■■□□□ 1.46
MBD4-202ENST00000393278 CEBPAP49715 358 aaPredicted RBP24.19■■□□□ 1.46
MBD4-202ENST00000393278 CCER2I3L3R5 266 aa24.18■■□□□ 1.46
MBD4-202ENST00000393278 TMEM132EQ6IEE7 984 aa24.17■■□□□ 1.46
MBD4-202ENST00000393278 UBR1Q8IWV7 1749 aa24.16■■□□□ 1.46
MBD4-202ENST00000393278 SBNO2Q9Y2G9 1366 aa24.15■■□□□ 1.46
MBD4-202ENST00000393278 SLC24A1O60721 1099 aa24.15■■□□□ 1.46
MBD4-202ENST00000393278 ASXL1Q8IXJ9 1541 aa24.15■■□□□ 1.46
MBD4-202ENST00000393278 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.14■■□□□ 1.45
MBD4-202ENST00000393278 TRAK1Q9UPV9 953 aa24.14■■□□□ 1.45
MBD4-202ENST00000393278 ALKQ9UM73 1620 aa24.13■■□□□ 1.45
MBD4-202ENST00000393278 CDCA8Q53HL2 280 aa24.12■■□□□ 1.45
MBD4-202ENST00000393278 CENPJQ9HC77 1338 aaPredicted RBP24.12■■□□□ 1.45
MBD4-202ENST00000393278 ADAMTSL3P82987 1691 aa24.11■■□□□ 1.45
MBD4-202ENST00000393278 TMEM2Q9UHN6 1383 aa24.1■■□□□ 1.45
MBD4-202ENST00000393278 PRKRIP1Q9H875 184 aaPredicted RBP24.1■■□□□ 1.45
MBD4-202ENST00000393278 ARHGEF28Q8N1W1 1705 aaKnown RBP24.1■■□□□ 1.45
MBD4-202ENST00000393278 RIMS1Q86UR5 1692 aaKnown RBP24.09■■□□□ 1.45
MBD4-202ENST00000393278 HDGFP51858 240 aaKnown RBP24.09■■□□□ 1.45
MBD4-202ENST00000393278 YTHDC1Q96MU7 727 aaKnown RBP24.09■■□□□ 1.45
MBD4-202ENST00000393278 QRICH2Q9H0J4 1663 aa24.08■■□□□ 1.45
MBD4-202ENST00000393278 SETD1AO15047 1707 aaKnown RBP24.06■■□□□ 1.44
MBD4-202ENST00000393278 NRXN3Q9Y4C0 1643 aa24.06■■□□□ 1.44
MBD4-202ENST00000393278 PTPRMP28827 1452 aa24.06■■□□□ 1.44
MBD4-202ENST00000393278 YTHDC2Q9H6S0 1430 aaKnown RBP24.06■■□□□ 1.44
MBD4-202ENST00000393278 SENP3Q9H4L4 574 aaPredicted RBP24.05■■□□□ 1.44
MBD4-202ENST00000393278 PLPPR3Q6T4P5 718 aa24.05■■□□□ 1.44
MBD4-202ENST00000393278 SLIT1O75093 1534 aa24.01■■□□□ 1.43
MBD4-202ENST00000393278 CENPBP07199 599 aaPredicted RBP24.01■■□□□ 1.43
MBD4-202ENST00000393278 MYOM1P52179 1685 aa24.01■■□□□ 1.43
MBD4-202ENST00000393278 ARHGAP23Q9P227 1491 aa24■■□□□ 1.43
MBD4-202ENST00000393278 STK26Q9P289 416 aa24■■□□□ 1.43
MBD4-202ENST00000393278 PER1O15534 1290 aaPredicted RBP23.99■■□□□ 1.43
MBD4-202ENST00000393278 PANK3Q9H999 370 aa23.99■■□□□ 1.43
MBD4-202ENST00000393278 LRPPRCP42704 1394 aaKnown RBP23.98■■□□□ 1.43
MBD4-202ENST00000393278 DLC1Q96QB1 1528 aa23.97■■□□□ 1.43
MBD4-202ENST00000393278 PLEKHG1Q9ULL1 1385 aa23.97■■□□□ 1.43
MBD4-202ENST00000393278 CEP170BQ9Y4F5 1589 aaPredicted RBP23.96■■□□□ 1.43
MBD4-202ENST00000393278 KTN1Q86UP2 1357 aaKnown RBP23.96■■□□□ 1.43
MBD4-202ENST00000393278 LTKP29376 864 aa23.95■■□□□ 1.43
MBD4-202ENST00000393278 THEMISQ8N1K5 641 aaPredicted RBP23.95■■□□□ 1.43
MBD4-202ENST00000393278 TULP4Q9NRJ4 1543 aa23.94■■□□□ 1.42
MBD4-202ENST00000393278 TXNDC2Q86VQ3 553 aa23.94■■□□□ 1.42
MBD4-202ENST00000393278 METP08581 1390 aa23.93■■□□□ 1.42
MBD4-202ENST00000393278 ABCC11Q96J66 1382 aa23.93■■□□□ 1.42
MBD4-202ENST00000393278 ADAMTS13Q76LX8 1427 aa23.93■■□□□ 1.42
MBD4-202ENST00000393278 PRAM1Q96QH2 718 aa23.93■■□□□ 1.42
MBD4-202ENST00000393278 EID1Q9Y6B2 187 aa23.93■■□□□ 1.42
MBD4-202ENST00000393278 PUS7Q96PZ0 661 aaKnown RBP23.92■■□□□ 1.42
MBD4-202ENST00000393278 EVC2Q86UK5 1308 aa23.92■■□□□ 1.42
MBD4-202ENST00000393278 RALBP1Q15311 655 aa23.91■■□□□ 1.42
MBD4-202ENST00000393278 POGKQ9P215 609 aa23.9■■□□□ 1.42
MBD4-202ENST00000393278 ZNF142P52746 1687 aaPredicted RBP23.9■■□□□ 1.42
MBD4-202ENST00000393278 KNDC1Q76NI1 1749 aa23.89■■□□□ 1.42
MBD4-202ENST00000393278 CNGB1Q14028 1251 aaPredicted RBP23.89■■□□□ 1.42
MBD4-202ENST00000393278 CCDC184Q52MB2 194 aa23.89■■□□□ 1.42
MBD4-202ENST00000393278 BCANQ96GW7 911 aa23.89■■□□□ 1.42
MBD4-202ENST00000393278 MED14O60244 1454 aa23.89■■□□□ 1.42
MBD4-202ENST00000393278 SAFB2Q14151 953 aaKnown RBP eCLIP23.89■■□□□ 1.41
MBD4-202ENST00000393278 PARD3Q8TEW0 1356 aa23.89■■□□□ 1.41
MBD4-202ENST00000393278 TECPR2O15040 1411 aa23.88■■□□□ 1.41
MBD4-202ENST00000393278 MRS2Q9HD23 443 aa23.86■■□□□ 1.41
MBD4-202ENST00000393278 SETD1BQ9UPS6 1966 aaKnown RBP23.86■■□□□ 1.41
MBD4-202ENST00000393278 KNSTRNQ9Y448 316 aa23.85■■□□□ 1.41
MBD4-202ENST00000393278 CPS1P31327 1500 aa23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms