RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ZC3H6P61129 1189 aaKnown RBP4.84□□□□□ -1.63
XRN1-202ENST00000392981 RBM27Q9P2N5 1060 aaKnown RBP4.84□□□□□ -1.63
XRN1-202ENST00000392981 TFIP11Q9UBB9 837 aaKnown RBP4.84□□□□□ -1.63
XRN1-202ENST00000392981 MICAL1Q8TDZ2 1067 aa4.84□□□□□ -1.63
XRN1-202ENST00000392981 TMX4Q9H1E5 349 aaPredicted RBP4.84□□□□□ -1.63
XRN1-202ENST00000392981 ANO2Q9NQ90 1003 aa4.84□□□□□ -1.63
XRN1-202ENST00000392981 PALM3A6NDB9 673 aaPredicted RBP4.83□□□□□ -1.64
XRN1-202ENST00000392981 PEX14O75381 377 aa4.83□□□□□ -1.64
XRN1-202ENST00000392981 IGBP1P78318 339 aa4.83□□□□□ -1.64
XRN1-202ENST00000392981 PPP1R12CQ9BZL4 782 aa4.83□□□□□ -1.64
XRN1-202ENST00000392981 ZNF16P17020 682 aaPredicted RBP4.83□□□□□ -1.64
XRN1-202ENST00000392981 DNAJA1P31689 397 aaKnown RBP4.83□□□□□ -1.64
XRN1-202ENST00000392981 REPIN1Q9BWE0 567 aaKnown RBP4.83□□□□□ -1.64
XRN1-202ENST00000392981 HMGB1P1B2RPK0 211 aaPredicted RBP4.82□□□□□ -1.64
XRN1-202ENST00000392981 CREBZFQ9NS37 354 aa4.82□□□□□ -1.64
XRN1-202ENST00000392981 CAPN10Q9HC96 672 aa4.82□□□□□ -1.64
XRN1-202ENST00000392981 MYSM1Q5VVJ2 828 aa4.82□□□□□ -1.64
XRN1-202ENST00000392981 CHADLQ6NUI6 762 aa4.82□□□□□ -1.64
XRN1-202ENST00000392981 MAPK1P28482 360 aa4.82□□□□□ -1.64
XRN1-202ENST00000392981 SERPINB4P48594 390 aa4.82□□□□□ -1.64
XRN1-202ENST00000392981 TBC1D2Q9BYX2 928 aa4.82□□□□□ -1.64
XRN1-202ENST00000392981 ANKRD33BA6NCL7 494 aa4.81□□□□□ -1.64
XRN1-202ENST00000392981 PNMA1Q8ND90 353 aa4.81□□□□□ -1.64
XRN1-202ENST00000392981 FAM50AQ14320 339 aaKnown RBP4.81□□□□□ -1.64
XRN1-202ENST00000392981 CRISPLD2Q9H0B8 497 aa4.81□□□□□ -1.64
XRN1-202ENST00000392981 GLYCTKQ8IVS8 523 aa4.81□□□□□ -1.64
XRN1-202ENST00000392981 XPCQ01831 940 aaPredicted RBP4.81□□□□□ -1.64
XRN1-202ENST00000392981 PDIA6Q15084 440 aa4.81□□□□□ -1.64
XRN1-202ENST00000392981 DIXDC1Q155Q3 683 aa4.81□□□□□ -1.64
XRN1-202ENST00000392981 ZSWIM4Q9H7M6 989 aa4.8□□□□□ -1.64
XRN1-202ENST00000392981 NDUFB9Q9Y6M9 179 aa4.8□□□□□ -1.64
XRN1-202ENST00000392981 WASHC4Q2M389 1173 aa4.8□□□□□ -1.64
XRN1-202ENST00000392981 BANK1Q8NDB2 785 aa4.8□□□□□ -1.64
XRN1-202ENST00000392981 EMILIN3Q9NT22 766 aa4.8□□□□□ -1.64
XRN1-202ENST00000392981 ATP2B1P20020 1258 aa4.8□□□□□ -1.64
XRN1-202ENST00000392981 ARID4AP29374 1257 aaPredicted RBP4.8□□□□□ -1.64
XRN1-202ENST00000392981 GNL2Q13823 731 aaKnown RBP4.8□□□□□ -1.64
XRN1-202ENST00000392981 MTMR14Q8NCE2 650 aa4.8□□□□□ -1.64
XRN1-202ENST00000392981 DHX38Q92620 1227 aaKnown RBP4.8□□□□□ -1.64
XRN1-202ENST00000392981 CCSER2Q9H7U1 834 aa4.8□□□□□ -1.64
XRN1-202ENST00000392981 ZEB1P37275 1124 aaPredicted RBP4.8□□□□□ -1.64
XRN1-202ENST00000392981 DEPDC4Q8N2C3 294 aa4.8□□□□□ -1.64
XRN1-202ENST00000392981 KIAA1522Q9P206 1035 aaPredicted RBP4.8□□□□□ -1.64
XRN1-202ENST00000392981 PSME1Q06323 249 aa4.79□□□□□ -1.64
XRN1-202ENST00000392981 AXDND1Q5T1B0 1012 aaPredicted RBP4.79□□□□□ -1.64
XRN1-202ENST00000392981 DPH6Q7L8W6 267 aa4.79□□□□□ -1.64
XRN1-202ENST00000392981 RIC3Q7Z5B4 369 aa4.79□□□□□ -1.64
XRN1-202ENST00000392981 ZNF710Q8N1W2 664 aa4.79□□□□□ -1.64
XRN1-202ENST00000392981 VTI1AQ96AJ9 217 aa4.79□□□□□ -1.64
XRN1-202ENST00000392981 RBM47A0AV96 593 aaKnown RBP4.79□□□□□ -1.64
XRN1-202ENST00000392981 MFSD10Q14728 455 aa4.79□□□□□ -1.64
XRN1-202ENST00000392981 EXOC8Q8IYI6 725 aa4.79□□□□□ -1.64
XRN1-202ENST00000392981 PRPF38AQ8NAV1 312 aaKnown RBP4.79□□□□□ -1.64
XRN1-202ENST00000392981 FBXO22Q8NEZ5 403 aa4.79□□□□□ -1.64
XRN1-202ENST00000392981 G3BP2Q9UN86 482 aaKnown RBP4.79□□□□□ -1.64
XRN1-202ENST00000392981 ARIH1Q9Y4X5 557 aaPredicted RBP4.79□□□□□ -1.64
XRN1-202ENST00000392981 USP17L8P0C7I0 530 aa4.79□□□□□ -1.64
XRN1-202ENST00000392981 DSG2Q14126 1118 aa4.79□□□□□ -1.64
XRN1-202ENST00000392981 TPD52L2O43399 206 aaKnown RBP4.78□□□□□ -1.64
XRN1-202ENST00000392981 LARP1Q6PKG0 1096 aaKnown RBP4.78□□□□□ -1.64
XRN1-202ENST00000392981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.78□□□□□ -1.643e-7■■■□□ 17.9
XRN1-202ENST00000392981 LAS1LQ9Y4W2 734 aaKnown RBP4.78□□□□□ -1.64
XRN1-202ENST00000392981 ENOX2Q16206 610 aaKnown RBP4.78□□□□□ -1.64
XRN1-202ENST00000392981 IFNL1Q8IU54 200 aa4.78□□□□□ -1.64
XRN1-202ENST00000392981 RDH13Q8NBN7 331 aa4.78□□□□□ -1.64
XRN1-202ENST00000392981 DDX11L8A8MPP1 907 aa4.78□□□□□ -1.64
XRN1-202ENST00000392981 H3BRB1 525 aa4.78□□□□□ -1.64
XRN1-202ENST00000392981 PLPP6Q8IY26 295 aa4.78□□□□□ -1.64
XRN1-202ENST00000392981 SIRT1Q96EB6 747 aa4.78□□□□□ -1.64
XRN1-202ENST00000392981 TUT1Q9H6E5 874 aaKnown RBP4.78□□□□□ -1.64
XRN1-202ENST00000392981 TMEM87AQ8NBN3 555 aa4.78□□□□□ -1.64
XRN1-202ENST00000392981 CCDC85CA6NKD9 419 aa4.78□□□□□ -1.65
XRN1-202ENST00000392981 RAB11FIP3O75154 756 aa4.78□□□□□ -1.65
XRN1-202ENST00000392981 LIMD1Q9UGP4 676 aa4.77□□□□□ -1.65
XRN1-202ENST00000392981 LGR5O75473 907 aa4.77□□□□□ -1.65
XRN1-202ENST00000392981 GIMAP6Q6P9H5 292 aa4.77□□□□□ -1.65
XRN1-202ENST00000392981 CENPBP07199 599 aaPredicted RBP4.77□□□□□ -1.65
XRN1-202ENST00000392981 ZNF211Q13398 564 aaPredicted RBP4.77□□□□□ -1.65
XRN1-202ENST00000392981 ZNF579Q8NAF0 562 aaKnown RBP4.77□□□□□ -1.65
XRN1-202ENST00000392981 NOVA2Q9UNW9 492 aaKnown RBP4.77□□□□□ -1.65
XRN1-202ENST00000392981 ERCC3P19447 782 aa4.77□□□□□ -1.65
XRN1-202ENST00000392981 RNF187Q5TA31 235 aaPredicted RBP4.77□□□□□ -1.65
XRN1-202ENST00000392981 ZNF662Q6ZS27 426 aa4.77□□□□□ -1.65
XRN1-202ENST00000392981 HELBQ8NG08 1087 aaPredicted RBP4.77□□□□□ -1.65
XRN1-202ENST00000392981 PLCD4Q9BRC7 762 aa4.77□□□□□ -1.65
XRN1-202ENST00000392981 SKIP12755 728 aa4.76□□□□□ -1.65
XRN1-202ENST00000392981 HSP90AB2PQ58FF8 381 aa4.76□□□□□ -1.65
XRN1-202ENST00000392981 FAM9BQ8IZU0 186 aa4.76□□□□□ -1.65
XRN1-202ENST00000392981 TMED8Q6PL24 325 aaPredicted RBP4.76□□□□□ -1.65
XRN1-202ENST00000392981 MKNK1Q9BUB5 465 aa4.76□□□□□ -1.65
XRN1-202ENST00000392981 TMEM106CQ9BVX2 250 aa4.76□□□□□ -1.65
XRN1-202ENST00000392981 CAMK2BQ13554 666 aa4.76□□□□□ -1.65
XRN1-202ENST00000392981 BMS1Q14692 1282 aaKnown RBP4.76□□□□□ -1.65
XRN1-202ENST00000392981 ZNF594Q96JF6 807 aaPredicted RBP4.76□□□□□ -1.65
XRN1-202ENST00000392981 PPME1Q9Y570 386 aa4.76□□□□□ -1.65
XRN1-202ENST00000392981 WDR78Q5VTH9 848 aa4.76□□□□□ -1.65
XRN1-202ENST00000392981 ZSCAN29Q8IWY8 852 aaPredicted RBP4.76□□□□□ -1.65
XRN1-202ENST00000392981 CABLES1Q8TDN4 633 aa4.76□□□□□ -1.65
XRN1-202ENST00000392981 NAP1L5Q96NT1 182 aaPredicted RBP4.76□□□□□ -1.65
XRN1-202ENST00000392981 GPHNQ9NQX3 736 aaPredicted RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms