RNA–Protein interactions for RNA: ENST00000391052.1

RNU6-1242P-201, Transcript of RNA, U6 small nuclear 1242, pseudogene, humanhuman

BASIC

Gene RNU6-1242P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1242P-201ENST00000391052 SOWAHBA6NEL2 793 aa10.32□□□□□ -0.76
RNU6-1242P-201ENST00000391052 CLCN1P35523 988 aa10.32□□□□□ -0.76
RNU6-1242P-201ENST00000391052 SWT1Q5T5J6 900 aaKnown RBP10.32□□□□□ -0.76
RNU6-1242P-201ENST00000391052 SLC24A3Q9HC58 644 aa10.32□□□□□ -0.76
RNU6-1242P-201ENST00000391052 HCSTQ9UBK5 93 aa10.32□□□□□ -0.76
RNU6-1242P-201ENST00000391052 PPP4CP60510 307 aa10.31□□□□□ -0.76
RNU6-1242P-201ENST00000391052 TTLL12Q14166 644 aaPredicted RBP10.31□□□□□ -0.76
RNU6-1242P-201ENST00000391052 C3orf80F5H4A9 247 aa10.3□□□□□ -0.76
RNU6-1242P-201ENST00000391052 THSD4Q6ZMP0 1018 aa10.3□□□□□ -0.76
RNU6-1242P-201ENST00000391052 NYAP1Q6ZVC0 841 aa10.3□□□□□ -0.76
RNU6-1242P-201ENST00000391052 PRR14Q9BWN1 585 aa10.3□□□□□ -0.76
RNU6-1242P-201ENST00000391052 PLSCR2Q9NRY7 297 aa10.3□□□□□ -0.76
RNU6-1242P-201ENST00000391052 DAXXQ9UER7 740 aaPredicted RBP10.3□□□□□ -0.76
RNU6-1242P-201ENST00000391052 TSR3Q9UJK0 312 aaKnown RBP10.3□□□□□ -0.76
RNU6-1242P-201ENST00000391052 PTPN5P54829 565 aa10.29□□□□□ -0.76
RNU6-1242P-201ENST00000391052 HPS5Q9UPZ3 1129 aa10.29□□□□□ -0.76
RNU6-1242P-201ENST00000391052 BCAMP50895 628 aa10.28□□□□□ -0.76
RNU6-1242P-201ENST00000391052 GPCPD1Q9NPB8 672 aa10.28□□□□□ -0.76
RNU6-1242P-201ENST00000391052 MDM2Q00987 491 aaPredicted RBP10.27□□□□□ -0.77
RNU6-1242P-201ENST00000391052 RDH13Q8NBN7 331 aa10.26□□□□□ -0.77
RNU6-1242P-201ENST00000391052 DDX11L8A8MPP1 907 aa10.25□□□□□ -0.77
RNU6-1242P-201ENST00000391052 TRIM66O15016 1216 aa10.25□□□□□ -0.77
RNU6-1242P-201ENST00000391052 AMHR2Q16671 573 aa10.25□□□□□ -0.77
RNU6-1242P-201ENST00000391052 KMT5BQ4FZB7 885 aa10.25□□□□□ -0.77
RNU6-1242P-201ENST00000391052 PHOX2BQ99453 314 aa10.22□□□□□ -0.77
RNU6-1242P-201ENST00000391052 PDE4DQ08499 809 aa10.21□□□□□ -0.77
RNU6-1242P-201ENST00000391052 NLRP7Q8WX94 980 aa10.21□□□□□ -0.77
RNU6-1242P-201ENST00000391052 WBP1LQ9NX94 342 aa10.2□□□□□ -0.78
RNU6-1242P-201ENST00000391052 CFHP08603 1231 aa10.18□□□□□ -0.78
RNU6-1242P-201ENST00000391052 GRIPAP1Q4V328 841 aa10.18□□□□□ -0.78
RNU6-1242P-201ENST00000391052 GIGYF2Q6Y7W6 1299 aaKnown RBP10.17□□□□□ -0.78
RNU6-1242P-201ENST00000391052 SSTR3P32745 418 aaPredicted RBP10.16□□□□□ -0.78
RNU6-1242P-201ENST00000391052 FAM217BQ9NTX9 383 aaPredicted RBP10.16□□□□□ -0.78
RNU6-1242P-201ENST00000391052 DIXDC1Q155Q3 683 aa10.15□□□□□ -0.78
RNU6-1242P-201ENST00000391052 NUTM1Q86Y26 1132 aa10.15□□□□□ -0.78
RNU6-1242P-201ENST00000391052 PARP9Q8IXQ6 854 aa10.15□□□□□ -0.78
RNU6-1242P-201ENST00000391052 PRKCSHP14314 528 aaPredicted RBP10.14□□□□□ -0.79
RNU6-1242P-201ENST00000391052 NEUROD2Q15784 382 aa10.14□□□□□ -0.79
RNU6-1242P-201ENST00000391052 PCDHB3Q9Y5E6 796 aa10.13□□□□□ -0.79
RNU6-1242P-201ENST00000391052 ACTN4O43707 911 aaKnown RBP10.12□□□□□ -0.79
RNU6-1242P-201ENST00000391052 SLC10A3P09131 477 aa10.12□□□□□ -0.79
RNU6-1242P-201ENST00000391052 CD46P15529 392 aa10.12□□□□□ -0.79
RNU6-1242P-201ENST00000391052 GCGRP47871 477 aa10.12□□□□□ -0.79
RNU6-1242P-201ENST00000391052 TMUB1Q9BVT8 246 aa10.12□□□□□ -0.79
RNU6-1242P-201ENST00000391052 USP46P62068 366 aa10.11□□□□□ -0.79
RNU6-1242P-201ENST00000391052 KDM4AO75164 1064 aa10.1□□□□□ -0.79
RNU6-1242P-201ENST00000391052 APLP1P51693 650 aa10.1□□□□□ -0.79
RNU6-1242P-201ENST00000391052 NR1I2O75469 434 aa10.09□□□□□ -0.79
RNU6-1242P-201ENST00000391052 DDRGK1Q96HY6 314 aa10.09□□□□□ -0.79
RNU6-1242P-201ENST00000391052 BEGAINQ9BUH8 593 aa10.09□□□□□ -0.79
RNU6-1242P-201ENST00000391052 ATP6V1AP38606 617 aa10.08□□□□□ -0.8
RNU6-1242P-201ENST00000391052 REPIN1Q9BWE0 567 aaKnown RBP10.08□□□□□ -0.8
RNU6-1242P-201ENST00000391052 KDM4CQ9H3R0 1056 aa10.08□□□□□ -0.8
RNU6-1242P-201ENST00000391052 IL21Q9HBE4 155 aa10.08□□□□□ -0.8
RNU6-1242P-201ENST00000391052 KCNC4Q03721 635 aa10.07□□□□□ -0.8
RNU6-1242P-201ENST00000391052 RSPH6AQ9H0K4 717 aa10.06□□□□□ -0.8
RNU6-1242P-201ENST00000391052 FUT2Q10981 343 aa10.05□□□□□ -0.8
RNU6-1242P-201ENST00000391052 COPS2P61201 443 aa10.04□□□□□ -0.8
RNU6-1242P-201ENST00000391052 MTRQ99707 1265 aa10.04□□□□□ -0.8
RNU6-1242P-201ENST00000391052 GPBP1L1Q9HC44 474 aaPredicted RBP10.04□□□□□ -0.8
RNU6-1242P-201ENST00000391052 ATP1B4Q9UN42 357 aaPredicted RBP10.04□□□□□ -0.8
RNU6-1242P-201ENST00000391052 MS4A1P11836 297 aa10.03□□□□□ -0.8
RNU6-1242P-201ENST00000391052 Q3C1V9 767 aa10.03□□□□□ -0.8
RNU6-1242P-201ENST00000391052 PLA2G2EQ9NZK7 142 aa10.03□□□□□ -0.8
RNU6-1242P-201ENST00000391052 ITGBL1O95965 494 aaPredicted RBP10.01□□□□□ -0.81
RNU6-1242P-201ENST00000391052 BLOC1S3Q6QNY0 202 aa10.01□□□□□ -0.81
RNU6-1242P-201ENST00000391052 BRPF1P55201 1214 aaPredicted RBP10□□□□□ -0.81
RNU6-1242P-201ENST00000391052 PUS10Q3MIT2 529 aaKnown RBP10□□□□□ -0.81
RNU6-1242P-201ENST00000391052 SPIRE2Q8WWL2 714 aa10□□□□□ -0.81
RNU6-1242P-201ENST00000391052 HOXA2O43364 376 aa9.99□□□□□ -0.81
RNU6-1242P-201ENST00000391052 ZPR1O75312 459 aa9.99□□□□□ -0.81
RNU6-1242P-201ENST00000391052 GGCXP38435 758 aa9.99□□□□□ -0.81
RNU6-1242P-201ENST00000391052 TJAP1Q5JTD0 557 aa9.99□□□□□ -0.81
RNU6-1242P-201ENST00000391052 MORN1Q5T089 497 aa9.99□□□□□ -0.81
RNU6-1242P-201ENST00000391052 TBC1D2Q9BYX2 928 aa9.99□□□□□ -0.81
RNU6-1242P-201ENST00000391052 FMNL1O95466 1100 aaPredicted RBP9.98□□□□□ -0.81
RNU6-1242P-201ENST00000391052 SCUBE3Q8IX30 993 aa9.98□□□□□ -0.81
RNU6-1242P-201ENST00000391052 FDX1P10109 184 aa9.97□□□□□ -0.81
RNU6-1242P-201ENST00000391052 GJA5P36382 358 aa9.96□□□□□ -0.82
RNU6-1242P-201ENST00000391052 IFFO2Q5TF58 517 aa9.96□□□□□ -0.82
RNU6-1242P-201ENST00000391052 FAM117AQ9C073 453 aa9.95□□□□□ -0.82
RNU6-1242P-201ENST00000391052 SLC27A5Q9Y2P5 690 aa9.95□□□□□ -0.82
RNU6-1242P-201ENST00000391052 SALL2Q9Y467 1007 aaPredicted RBP9.95□□□□□ -0.82
RNU6-1242P-201ENST00000391052 RIC3Q7Z5B4 369 aa9.94□□□□□ -0.82
RNU6-1242P-201ENST00000391052 SPSB2Q99619 263 aa9.94□□□□□ -0.82
RNU6-1242P-201ENST00000391052 C6orf229H3BNL8 230 aa9.93□□□□□ -0.82
RNU6-1242P-201ENST00000391052 IL27Q8NEV9 243 aa9.93□□□□□ -0.82
RNU6-1242P-201ENST00000391052 MOXD2PA6NHM9 499 aa9.92□□□□□ -0.82
RNU6-1242P-201ENST00000391052 SPDYE5A6NIY4 337 aa9.92□□□□□ -0.82
RNU6-1242P-201ENST00000391052 ADH1BP00325 375 aa9.92□□□□□ -0.82
RNU6-1242P-201ENST00000391052 ZNF516Q92618 1163 aa9.92□□□□□ -0.82
RNU6-1242P-201ENST00000391052 SPTLC1O15269 473 aa9.91□□□□□ -0.82
RNU6-1242P-201ENST00000391052 CLK2P49760 499 aaKnown RBP9.91□□□□□ -0.82
RNU6-1242P-201ENST00000391052 SKIV2LQ15477 1246 aaKnown RBP9.91□□□□□ -0.82
RNU6-1242P-201ENST00000391052 MYSM1Q5VVJ2 828 aa9.91□□□□□ -0.82
RNU6-1242P-201ENST00000391052 RSBN1LQ6PCB5 846 aaPredicted RBP9.91□□□□□ -0.82
RNU6-1242P-201ENST00000391052 PCMTD1Q96MG8 357 aaPredicted RBP9.91□□□□□ -0.82
RNU6-1242P-201ENST00000391052 NUTM2BA6NNL0 878 aaPredicted RBP9.9□□□□□ -0.82
RNU6-1242P-201ENST00000391052 NUTM2EB1AL46 878 aaPredicted RBP9.9□□□□□ -0.82
RNU6-1242P-201ENST00000391052 NDUFV2P19404 249 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms