RNA–Protein interactions for RNA: ENST00000390436.2

TRAV13-1-201, Transcript of T cell receptor alpha variable 13-1, humanhuman

APPRIS P1 BASIC

Gene TRAV13-1, Length 360 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1-201ENST00000390436 SYNMO15061 1565 aa10.68□□□□□ -0.7
TRAV13-1-201ENST00000390436 LRRC9Q6ZRR7 1453 aa10.68□□□□□ -0.7
TRAV13-1-201ENST00000390436 CROCC2H7BZ55 1655 aa10.67□□□□□ -0.7
TRAV13-1-201ENST00000390436 VASPP50552 380 aaPredicted RBP10.67□□□□□ -0.7
TRAV13-1-201ENST00000390436 THEMISQ8N1K5 641 aaPredicted RBP10.67□□□□□ -0.7
TRAV13-1-201ENST00000390436 SLIT1O75093 1534 aa10.65□□□□□ -0.7
TRAV13-1-201ENST00000390436 MAP3K1Q13233 1512 aa10.65□□□□□ -0.7
TRAV13-1-201ENST00000390436 POTEAQ6S8J7 498 aa10.65□□□□□ -0.7
TRAV13-1-201ENST00000390436 TET3O43151 1660 aa10.64□□□□□ -0.71
TRAV13-1-201ENST00000390436 SCAF11Q99590 1463 aaKnown RBP10.64□□□□□ -0.71
TRAV13-1-201ENST00000390436 PRDM15P57071 1507 aaPredicted RBP10.63□□□□□ -0.71
TRAV13-1-201ENST00000390436 ROBO1Q9Y6N7 1651 aa10.63□□□□□ -0.71
TRAV13-1-201ENST00000390436 AMER1Q5JTC6 1135 aaPredicted RBP10.63□□□□□ -0.71
TRAV13-1-201ENST00000390436 RTN4Q9NQC3 1192 aaKnown RBP10.63□□□□□ -0.71
TRAV13-1-201ENST00000390436 ABCC5O15440 1437 aa10.63□□□□□ -0.71
TRAV13-1-201ENST00000390436 MYOM3Q5VTT5 1437 aa10.61□□□□□ -0.71
TRAV13-1-201ENST00000390436 TXNDC2Q86VQ3 553 aa10.61□□□□□ -0.71
TRAV13-1-201ENST00000390436 AKT1S1Q96B36 256 aa10.61□□□□□ -0.71
TRAV13-1-201ENST00000390436 DUOX2Q9NRD8 1548 aa10.61□□□□□ -0.71
TRAV13-1-201ENST00000390436 VPS8Q8N3P4 1428 aa10.6□□□□□ -0.71
TRAV13-1-201ENST00000390436 TSPY4P0CV99 314 aa10.6□□□□□ -0.71
TRAV13-1-201ENST00000390436 TSPY10P0CW01 314 aa10.6□□□□□ -0.71
TRAV13-1-201ENST00000390436 RRP7BPQ9NSQ0 103 aa10.6□□□□□ -0.71
TRAV13-1-201ENST00000390436 PTPN23Q9H3S7 1636 aa10.59□□□□□ -0.71
TRAV13-1-201ENST00000390436 CHD2O14647 1828 aaKnown RBP10.59□□□□□ -0.71
TRAV13-1-201ENST00000390436 IDI1Q13907 227 aa10.59□□□□□ -0.71
TRAV13-1-201ENST00000390436 RSPH4AQ5TD94 716 aa10.59□□□□□ -0.71
TRAV13-1-201ENST00000390436 SLC26A8Q96RN1 970 aa10.59□□□□□ -0.71
TRAV13-1-201ENST00000390436 TMEM94Q12767 1356 aa10.59□□□□□ -0.71
TRAV13-1-201ENST00000390436 ARHGAP31Q2M1Z3 1444 aa10.58□□□□□ -0.72
TRAV13-1-201ENST00000390436 KIF15Q9NS87 1388 aa10.58□□□□□ -0.72
TRAV13-1-201ENST00000390436 TMEM2Q9UHN6 1383 aa10.58□□□□□ -0.72
TRAV13-1-201ENST00000390436 STAG3Q9UJ98 1225 aa10.58□□□□□ -0.72
TRAV13-1-201ENST00000390436 NWD1Q149M9 1564 aa10.56□□□□□ -0.72
TRAV13-1-201ENST00000390436 LRP6O75581 1613 aa10.56□□□□□ -0.72
TRAV13-1-201ENST00000390436 CHIC2Q9UKJ5 165 aa10.56□□□□□ -0.72
TRAV13-1-201ENST00000390436 EFCAB6Q5THR3 1501 aa10.56□□□□□ -0.72
TRAV13-1-201ENST00000390436 DAPK1P53355 1430 aa10.56□□□□□ -0.72
TRAV13-1-201ENST00000390436 FAM135BQ49AJ0 1406 aa10.56□□□□□ -0.72
TRAV13-1-201ENST00000390436 GCC2Q8IWJ2 1684 aa10.56□□□□□ -0.72
TRAV13-1-201ENST00000390436 PHLPP1O60346 1717 aa10.55□□□□□ -0.72
TRAV13-1-201ENST00000390436 COL16A1Q07092 1604 aaPredicted RBP10.55□□□□□ -0.72
TRAV13-1-201ENST00000390436 KDM5AP29375 1690 aaKnown RBP10.55□□□□□ -0.72
TRAV13-1-201ENST00000390436 IFNLR1Q8IU57 520 aaPredicted RBP10.55□□□□□ -0.72
TRAV13-1-201ENST00000390436 NOS1P29475 1434 aa10.55□□□□□ -0.72
TRAV13-1-201ENST00000390436 LMTK2Q8IWU2 1503 aa10.54□□□□□ -0.72
TRAV13-1-201ENST00000390436 ERBINQ96RT1 1412 aa10.53□□□□□ -0.72
TRAV13-1-201ENST00000390436 ADGRB3O60242 1522 aa10.53□□□□□ -0.72
TRAV13-1-201ENST00000390436 ZFYVE9O95405 1425 aa10.52□□□□□ -0.73
TRAV13-1-201ENST00000390436 TMEM131LA2VDJ0 1609 aa10.52□□□□□ -0.73
TRAV13-1-201ENST00000390436 KCNA6P17658 529 aa10.52□□□□□ -0.73
TRAV13-1-201ENST00000390436 REM2Q8IYK8 340 aaPredicted RBP10.52□□□□□ -0.73
TRAV13-1-201ENST00000390436 FGD6Q6ZV73 1430 aa10.51□□□□□ -0.73
TRAV13-1-201ENST00000390436 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.51□□□□□ -0.73
TRAV13-1-201ENST00000390436 NUTM2DQ5VT03 806 aaPredicted RBP10.51□□□□□ -0.73
TRAV13-1-201ENST00000390436 PROSER2Q86WR7 435 aaPredicted RBP10.51□□□□□ -0.73
TRAV13-1-201ENST00000390436 E9PCH4 1651 aa10.5□□□□□ -0.73
TRAV13-1-201ENST00000390436 SPDYE1Q8NFV5 336 aaPredicted RBP10.5□□□□□ -0.73
TRAV13-1-201ENST00000390436 ADAMTS13Q76LX8 1427 aa10.49□□□□□ -0.73
TRAV13-1-201ENST00000390436 PTPRUQ92729 1446 aa10.49□□□□□ -0.73
TRAV13-1-201ENST00000390436 DIP2AQ14689 1571 aa10.48□□□□□ -0.73
TRAV13-1-201ENST00000390436 NRXN3Q9Y4C0 1643 aa10.47□□□□□ -0.73
TRAV13-1-201ENST00000390436 SLAIN2Q9P270 581 aa10.47□□□□□ -0.73
TRAV13-1-201ENST00000390436 EID1Q9Y6B2 187 aa10.47□□□□□ -0.73
TRAV13-1-201ENST00000390436 NKTRP30414 1462 aaKnown RBP10.47□□□□□ -0.73
TRAV13-1-201ENST00000390436 RIMS2Q9UQ26 1411 aa10.46□□□□□ -0.74
TRAV13-1-201ENST00000390436 ADGRL2O95490 1459 aa10.46□□□□□ -0.74
TRAV13-1-201ENST00000390436 SHPRHQ149N8 1683 aa10.44□□□□□ -0.74
TRAV13-1-201ENST00000390436 UNC13BO14795 1591 aa10.44□□□□□ -0.74
TRAV13-1-201ENST00000390436 PLEKHG1Q9ULL1 1385 aa10.44□□□□□ -0.74
TRAV13-1-201ENST00000390436 PLCD3Q8N3E9 789 aa10.44□□□□□ -0.74
TRAV13-1-201ENST00000390436 MIER1Q8N108 512 aa10.43□□□□□ -0.74
TRAV13-1-201ENST00000390436 DDX17Q92841 729 aaKnown RBP10.43□□□□□ -0.74
TRAV13-1-201ENST00000390436 CLEC11AQ9Y240 323 aa10.43□□□□□ -0.74
TRAV13-1-201ENST00000390436 AHDC1Q5TGY3 1603 aaPredicted RBP10.43□□□□□ -0.74
TRAV13-1-201ENST00000390436 ANKRD30AQ9BXX3 1397 aa10.42□□□□□ -0.74
TRAV13-1-201ENST00000390436 UPF1Q92900 1129 aaKnown RBP eCLIP10.42□□□□□ -0.74
TRAV13-1-201ENST00000390436 XRN1Q8IZH2 1706 aaKnown RBP10.41□□□□□ -0.74
TRAV13-1-201ENST00000390436 MSH6P52701 1360 aa10.41□□□□□ -0.74
TRAV13-1-201ENST00000390436 KANK1Q14678 1352 aa10.41□□□□□ -0.74
TRAV13-1-201ENST00000390436 JCADQ9P266 1359 aa10.41□□□□□ -0.74
TRAV13-1-201ENST00000390436 TRIM52Q96A61 297 aa10.41□□□□□ -0.74
TRAV13-1-201ENST00000390436 ANKRD50Q9ULJ7 1429 aa10.41□□□□□ -0.74
TRAV13-1-201ENST00000390436 NHSL1Q5SYE7 1610 aa10.4□□□□□ -0.74
TRAV13-1-201ENST00000390436 PITPNM1O00562 1244 aa10.4□□□□□ -0.74
TRAV13-1-201ENST00000390436 NALCNQ8IZF0 1738 aa10.39□□□□□ -0.75
TRAV13-1-201ENST00000390436 KLHL34Q8N239 644 aa10.39□□□□□ -0.75
TRAV13-1-201ENST00000390436 BCANQ96GW7 911 aa10.39□□□□□ -0.75
TRAV13-1-201ENST00000390436 TBX22Q9Y458 520 aa10.39□□□□□ -0.75
TRAV13-1-201ENST00000390436 IQGAP3Q86VI3 1631 aa10.39□□□□□ -0.75
TRAV13-1-201ENST00000390436 RPRD2Q5VT52 1461 aaKnown RBP10.38□□□□□ -0.75
TRAV13-1-201ENST00000390436 BRINP3Q76B58 766 aa10.38□□□□□ -0.75
TRAV13-1-201ENST00000390436 SLC52A1Q9NWF4 448 aa10.38□□□□□ -0.75
TRAV13-1-201ENST00000390436 CHGAP10645 457 aaKnown RBP10.37□□□□□ -0.75
TRAV13-1-201ENST00000390436 FAM50AQ14320 339 aaKnown RBP10.37□□□□□ -0.75
TRAV13-1-201ENST00000390436 ASXL1Q8IXJ9 1541 aa10.37□□□□□ -0.75
TRAV13-1-201ENST00000390436 METP08581 1390 aa10.37□□□□□ -0.75
TRAV13-1-201ENST00000390436 MST1RQ04912 1400 aa10.36□□□□□ -0.75
TRAV13-1-201ENST00000390436 NUTM2BA6NNL0 878 aaPredicted RBP10.36□□□□□ -0.75
TRAV13-1-201ENST00000390436 NUTM2EB1AL46 878 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms