RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 ABCC3O15438 1527 aa13.89□□□□□ -0.19
LTN1-203ENST00000389195 CFAP74Q9C0B2 1584 aa13.89□□□□□ -0.19
LTN1-203ENST00000389195 FKBP8Q14318 412 aa13.88□□□□□ -0.19
LTN1-203ENST00000389195 SUPT16HQ9Y5B9 1047 aaKnown RBP13.88□□□□□ -0.19
LTN1-203ENST00000389195 GPRASP1Q5JY77 1395 aa13.88□□□□□ -0.19
LTN1-203ENST00000389195 PER1O15534 1290 aaPredicted RBP13.88□□□□□ -0.19
LTN1-203ENST00000389195 TMC1Q8TDI8 760 aa13.88□□□□□ -0.19
LTN1-203ENST00000389195 MADDQ8WXG6 1647 aa13.88□□□□□ -0.19
LTN1-203ENST00000389195 STAG3Q9UJ98 1225 aa13.87□□□□□ -0.19
LTN1-203ENST00000389195 EIF2AK4Q9P2K8 1649 aaKnown RBP13.87□□□□□ -0.19
LTN1-203ENST00000389195 CEBPAP49715 358 aaPredicted RBP13.87□□□□□ -0.19
LTN1-203ENST00000389195 POLR1AO95602 1720 aaPredicted RBP13.84□□□□□ -0.19
LTN1-203ENST00000389195 TNNT2P45379 298 aaPredicted RBP13.84□□□□□ -0.19
LTN1-203ENST00000389195 KIF1BO60333 1816 aa13.83□□□□□ -0.2
LTN1-203ENST00000389195 GLI2P10070 1586 aa13.83□□□□□ -0.2
LTN1-203ENST00000389195 KIF13AQ9H1H9 1805 aa13.82□□□□□ -0.2
LTN1-203ENST00000389195 SYNMO15061 1565 aa13.81□□□□□ -0.2
LTN1-203ENST00000389195 SLC12A5Q9H2X9 1139 aa13.81□□□□□ -0.2
LTN1-203ENST00000389195 CAMSAP1Q5T5Y3 1602 aa13.81□□□□□ -0.2
LTN1-203ENST00000389195 PNISRQ8TF01 805 aaKnown RBP13.81□□□□□ -0.2
LTN1-203ENST00000389195 SCAF11Q99590 1463 aaKnown RBP13.8□□□□□ -0.2
LTN1-203ENST00000389195 C14orf93Q9H972 538 aaKnown RBP13.8□□□□□ -0.2
LTN1-203ENST00000389195 ESF1Q9H501 851 aaKnown RBP13.79□□□□□ -0.2
LTN1-203ENST00000389195 LMTK2Q8IWU2 1503 aa13.79□□□□□ -0.2
LTN1-203ENST00000389195 CARD14Q9BXL6 1004 aa13.79□□□□□ -0.2
LTN1-203ENST00000389195 CABP2Q9NPB3 220 aa13.79□□□□□ -0.2
LTN1-203ENST00000389195 KNSTRNQ9Y448 316 aa13.78□□□□□ -0.2
LTN1-203ENST00000389195 MYO5BQ9ULV0 1848 aa13.78□□□□□ -0.2
LTN1-203ENST00000389195 ADGRB3O60242 1522 aa13.77□□□□□ -0.21
LTN1-203ENST00000389195 VGFO15240 615 aaPredicted RBP13.77□□□□□ -0.21
LTN1-203ENST00000389195 MINK1Q8N4C8 1332 aaPredicted RBP13.76□□□□□ -0.21
LTN1-203ENST00000389195 CENPJQ9HC77 1338 aaPredicted RBP13.76□□□□□ -0.21
LTN1-203ENST00000389195 KTN1Q86UP2 1357 aaKnown RBP13.76□□□□□ -0.21
LTN1-203ENST00000389195 MYBBP1AQ9BQG0 1328 aaKnown RBP13.76□□□□□ -0.21
LTN1-203ENST00000389195 WAPLQ7Z5K2 1190 aa13.76□□□□□ -0.21
LTN1-203ENST00000389195 PIK3C2GO75747 1445 aa13.75□□□□□ -0.21
LTN1-203ENST00000389195 SLC52A1Q9NWF4 448 aa13.75□□□□□ -0.21
LTN1-203ENST00000389195 AMER1Q5JTC6 1135 aaPredicted RBP13.74□□□□□ -0.21
LTN1-203ENST00000389195 IQGAP1P46940 1657 aa13.74□□□□□ -0.21
LTN1-203ENST00000389195 CLTCQ00610 1675 aaKnown RBP13.74□□□□□ -0.21
LTN1-203ENST00000389195 PRAM1Q96QH2 718 aa13.73□□□□□ -0.21
LTN1-203ENST00000389195 RALBP1Q15311 655 aa13.73□□□□□ -0.21
LTN1-203ENST00000389195 ZMYM3Q14202 1370 aa13.73□□□□□ -0.21
LTN1-203ENST00000389195 ERVK-7P63135 1459 aa13.72□□□□□ -0.21
LTN1-203ENST00000389195 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
LTN1-203ENST00000389195 MYOM2P54296 1465 aa13.71□□□□□ -0.21
LTN1-203ENST00000389195 PARD3Q8TEW0 1356 aa13.71□□□□□ -0.21
LTN1-203ENST00000389195 NLRP13Q86W25 1043 aa13.71□□□□□ -0.21
LTN1-203ENST00000389195 PPLO60437 1756 aa13.71□□□□□ -0.21
LTN1-203ENST00000389195 IFT172Q9UG01 1749 aa13.71□□□□□ -0.21
LTN1-203ENST00000389195 EIF3AQ14152 1382 aaKnown RBP13.71□□□□□ -0.22
LTN1-203ENST00000389195 NUTM2FA1L443 756 aa13.7□□□□□ -0.22
LTN1-203ENST00000389195 SRPK2P78362 688 aaKnown RBP13.7□□□□□ -0.22
LTN1-203ENST00000389195 CDCA7LQ96GN5 454 aa13.7□□□□□ -0.22
LTN1-203ENST00000389195 ADAMTS8Q9UP79 889 aa13.7□□□□□ -0.22
LTN1-203ENST00000389195 ZMYM4Q5VZL5 1548 aa13.7□□□□□ -0.22
LTN1-203ENST00000389195 PPP2R1AP30153 589 aa13.7□□□□□ -0.22
LTN1-203ENST00000389195 CCDC146Q8IYE0 955 aa13.7□□□□□ -0.22
LTN1-203ENST00000389195 STAC3Q96MF2 364 aa13.7□□□□□ -0.22
LTN1-203ENST00000389195 POGKQ9P215 609 aa13.7□□□□□ -0.22
LTN1-203ENST00000389195 NEXMIFQ5QGS0 1516 aa13.7□□□□□ -0.22
LTN1-203ENST00000389195 PREX1Q8TCU6 1659 aa13.7□□□□□ -0.22
LTN1-203ENST00000389195 NCKAP5LQ9HCH0 1330 aa13.7□□□□□ -0.22
LTN1-203ENST00000389195 FBLN1P23142 703 aa13.7□□□□□ -0.22
LTN1-203ENST00000389195 NRXN1Q9ULB1 1477 aa13.69□□□□□ -0.22
LTN1-203ENST00000389195 TXNDC2Q86VQ3 553 aa13.69□□□□□ -0.22
LTN1-203ENST00000389195 RPGRIP1LQ68CZ1 1315 aa13.68□□□□□ -0.22
LTN1-203ENST00000389195 LAMC1P11047 1609 aa13.68□□□□□ -0.22
LTN1-203ENST00000389195 ARHGAP31Q2M1Z3 1444 aa13.68□□□□□ -0.22
LTN1-203ENST00000389195 ZBED9Q6R2W3 1325 aa13.68□□□□□ -0.22
LTN1-203ENST00000389195 ADGRB1O14514 1584 aa13.68□□□□□ -0.22
LTN1-203ENST00000389195 NEFLP07196 543 aa13.68□□□□□ -0.22
LTN1-203ENST00000389195 CDCA8Q53HL2 280 aa13.67□□□□□ -0.22
LTN1-203ENST00000389195 SLC26A8Q96RN1 970 aa13.67□□□□□ -0.22
LTN1-203ENST00000389195 PLEKHH1Q9ULM0 1364 aa13.67□□□□□ -0.22
LTN1-203ENST00000389195 TMEM131LA2VDJ0 1609 aa13.66□□□□□ -0.22
LTN1-203ENST00000389195 BRD4O60885 1362 aaPredicted RBP13.65□□□□□ -0.22
LTN1-203ENST00000389195 LTKP29376 864 aa13.64□□□□□ -0.23
LTN1-203ENST00000389195 RBM33Q96EV2 1170 aaKnown RBP13.63□□□□□ -0.23
LTN1-203ENST00000389195 ASXL1Q8IXJ9 1541 aa13.63□□□□□ -0.23
LTN1-203ENST00000389195 MYOM1P52179 1685 aa13.63□□□□□ -0.23
LTN1-203ENST00000389195 GGNBP2Q9H3C7 697 aa13.63□□□□□ -0.23
LTN1-203ENST00000389195 METP08581 1390 aa13.62□□□□□ -0.23
LTN1-203ENST00000389195 NSD3Q9BZ95 1437 aa13.62□□□□□ -0.23
LTN1-203ENST00000389195 A2ML1A8K2U0 1454 aa13.62□□□□□ -0.23
LTN1-203ENST00000389195 RIMS2Q9UQ26 1411 aa13.62□□□□□ -0.23
LTN1-203ENST00000389195 NEUROD2Q15784 382 aa13.62□□□□□ -0.23
LTN1-203ENST00000389195 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.62□□□□□ -0.232e-6■■■□□ 17.9
LTN1-203ENST00000389195 CDK19Q9BWU1 502 aa13.62□□□□□ -0.23
LTN1-203ENST00000389195 CABP1Q9NZU7 370 aa13.62□□□□□ -0.23
LTN1-203ENST00000389195 ARHGEF40Q8TER5 1519 aa13.61□□□□□ -0.23
LTN1-203ENST00000389195 LRPPRCP42704 1394 aaKnown RBP13.61□□□□□ -0.23
LTN1-203ENST00000389195 MORC1Q86VD1 984 aa13.61□□□□□ -0.23
LTN1-203ENST00000389195 EVC2Q86UK5 1308 aa13.61□□□□□ -0.23
LTN1-203ENST00000389195 QRICH2Q9H0J4 1663 aa13.61□□□□□ -0.23
LTN1-203ENST00000389195 KIAA1210Q9ULL0 1709 aa13.6□□□□□ -0.23
LTN1-203ENST00000389195 KDM5AP29375 1690 aaKnown RBP13.6□□□□□ -0.23
LTN1-203ENST00000389195 ZC3H13Q5T200 1668 aaKnown RBP13.6□□□□□ -0.23
LTN1-203ENST00000389195 YTHDC2Q9H6S0 1430 aaKnown RBP13.6□□□□□ -0.23
LTN1-203ENST00000389195 B4GALNT3Q6L9W6 998 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms