RNA–Protein interactions for RNA: ENST00000382100.7

VLDLR-203, Transcript of very low density lipoprotein receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VLDLR, Length 9,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-203ENST00000382100 SAFBQ15424 915 aaKnown RBP eCLIP11.92□□□□□ -0.5
VLDLR-203ENST00000382100 SCRIBQ14160 1630 aa11.92□□□□□ -0.5
VLDLR-203ENST00000382100 TXLNAP40222 546 aa11.92□□□□□ -0.5
VLDLR-203ENST00000382100 CFAP57Q96MR6 1250 aa11.92□□□□□ -0.5
VLDLR-203ENST00000382100 CFDP1Q9UEE9 299 aaPredicted RBP11.92□□□□□ -0.5
VLDLR-203ENST00000382100 TRIM21P19474 475 aaKnown RBP11.91□□□□□ -0.5
VLDLR-203ENST00000382100 CCDC73Q6ZRK6 1079 aa11.91□□□□□ -0.5
VLDLR-203ENST00000382100 H3BQV1 296 aa11.91□□□□□ -0.5
VLDLR-203ENST00000382100 TRIM29Q14134 588 aa11.91□□□□□ -0.5
VLDLR-203ENST00000382100 IFFO2Q5TF58 517 aa11.91□□□□□ -0.5
VLDLR-203ENST00000382100 ODF2Q5BJF6 829 aa11.91□□□□□ -0.5
VLDLR-203ENST00000382100 BRMS1Q9HCU9 246 aa11.91□□□□□ -0.5
VLDLR-203ENST00000382100 FAM13BQ9NYF5 915 aa11.91□□□□□ -0.5
VLDLR-203ENST00000382100 CCDC18Q5T9S5 1454 aa11.91□□□□□ -0.5
VLDLR-203ENST00000382100 TUBBP07437 444 aa11.91□□□□□ -0.5
VLDLR-203ENST00000382100 HOMER1Q86YM7 354 aa11.91□□□□□ -0.5
VLDLR-203ENST00000382100 POGKQ9P215 609 aa11.9□□□□□ -0.5
VLDLR-203ENST00000382100 ATRXP46100 2492 aa11.9□□□□□ -0.5
VLDLR-203ENST00000382100 MCM5P33992 734 aa11.9□□□□□ -0.5
VLDLR-203ENST00000382100 CALCOCO1Q9P1Z2 691 aa11.9□□□□□ -0.5
VLDLR-203ENST00000382100 MICALCLQ6ZW33 695 aa11.9□□□□□ -0.5
VLDLR-203ENST00000382100 TCEAL9Q9UHQ7 104 aa11.9□□□□□ -0.5
VLDLR-203ENST00000382100 A6NNZ2 444 aa11.9□□□□□ -0.51
VLDLR-203ENST00000382100 TUBB8Q3ZCM7 444 aa11.9□□□□□ -0.51
VLDLR-203ENST00000382100 DDX49Q9Y6V7 483 aaKnown RBP11.9□□□□□ -0.51
VLDLR-203ENST00000382100 FAM114A2Q9NRY5 505 aa11.89□□□□□ -0.51
VLDLR-203ENST00000382100 PRM3Q9NNZ6 103 aa11.89□□□□□ -0.51
VLDLR-203ENST00000382100 HIP1O00291 1037 aa11.89□□□□□ -0.51
VLDLR-203ENST00000382100 POTEB2H3BUK9 544 aa11.89□□□□□ -0.51
VLDLR-203ENST00000382100 SSR1P43307 286 aaKnown RBP11.89□□□□□ -0.51
VLDLR-203ENST00000382100 HOOK3Q86VS8 718 aa11.89□□□□□ -0.51
VLDLR-203ENST00000382100 DACH1Q9UI36 760 aa11.89□□□□□ -0.51
VLDLR-203ENST00000382100 CT47A1Q5JQC4 288 aaPredicted RBP11.88□□□□□ -0.51
VLDLR-203ENST00000382100 CIZ1Q9ULV3 898 aaPredicted RBP11.88□□□□□ -0.51
VLDLR-203ENST00000382100 C14orf37Q86TY3 774 aa11.88□□□□□ -0.51
VLDLR-203ENST00000382100 FRAT1Q92837 279 aaPredicted RBP11.88□□□□□ -0.51
VLDLR-203ENST00000382100 CNTRLQ7Z7A1 2325 aa11.87□□□□□ -0.51
VLDLR-203ENST00000382100 CNTLNQ9NXG0 1405 aa11.87□□□□□ -0.51
VLDLR-203ENST00000382100 CT47B1P0C2W7 299 aaPredicted RBP11.87□□□□□ -0.51
VLDLR-203ENST00000382100 DHX37Q8IY37 1157 aaKnown RBP11.87□□□□□ -0.51
VLDLR-203ENST00000382100 ZNHIT6Q9NWK9 470 aaKnown RBP11.87□□□□□ -0.51
VLDLR-203ENST00000382100 GORABQ5T7V8 394 aa11.87□□□□□ -0.51
VLDLR-203ENST00000382100 DZIP1LQ8IYY4 767 aaKnown RBP11.87□□□□□ -0.51
VLDLR-203ENST00000382100 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.87□□□□□ -0.51
VLDLR-203ENST00000382100 DDX19BQ9UMR2 479 aa11.86□□□□□ -0.51
VLDLR-203ENST00000382100 NOL10Q9BSC4 688 aaKnown RBP11.86□□□□□ -0.51
VLDLR-203ENST00000382100 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.86□□□□□ -0.51
VLDLR-203ENST00000382100 WASHC2CQ9Y4E1 1318 aa11.86□□□□□ -0.51
VLDLR-203ENST00000382100 CREBRFQ8IUR6 639 aa11.86□□□□□ -0.51
VLDLR-203ENST00000382100 VSIG10Q8N0Z9 540 aa11.86□□□□□ -0.51
VLDLR-203ENST00000382100 OLFM4Q6UX06 510 aa11.86□□□□□ -0.51
VLDLR-203ENST00000382100 CARMIL2Q6F5E8 1435 aa11.86□□□□□ -0.51
VLDLR-203ENST00000382100 CCDC91Q7Z6B0 441 aa11.86□□□□□ -0.51
VLDLR-203ENST00000382100 DNAAF4Q8WXU2 420 aa11.86□□□□□ -0.51
VLDLR-203ENST00000382100 STAMBPO95630 424 aa11.85□□□□□ -0.51
VLDLR-203ENST00000382100 FAM114A1Q8IWE2 563 aa11.85□□□□□ -0.51
VLDLR-203ENST00000382100 TTLL5Q6EMB2 1281 aa11.85□□□□□ -0.51
VLDLR-203ENST00000382100 CCDC144AA2RUR9 1427 aa11.85□□□□□ -0.51
VLDLR-203ENST00000382100 SLKQ9H2G2 1235 aaPredicted RBP11.85□□□□□ -0.51
VLDLR-203ENST00000382100 STIM1Q13586 685 aa11.85□□□□□ -0.51
VLDLR-203ENST00000382100 RNF214Q8ND24 703 aa11.85□□□□□ -0.51
VLDLR-203ENST00000382100 GOLGA6L9A6NEM1 432 aa11.85□□□□□ -0.51
VLDLR-203ENST00000382100 NEMFO60524 1076 aa11.85□□□□□ -0.51
VLDLR-203ENST00000382100 MORC1Q86VD1 984 aa11.85□□□□□ -0.51
VLDLR-203ENST00000382100 CUX1P39880 1505 aa11.84□□□□□ -0.51
VLDLR-203ENST00000382100 PSMA5P28066 241 aa11.84□□□□□ -0.51
VLDLR-203ENST00000382100 SASS6Q6UVJ0 657 aa11.84□□□□□ -0.51
VLDLR-203ENST00000382100 ERC2O15083 957 aa11.84□□□□□ -0.51
VLDLR-203ENST00000382100 TRDNQ13061 729 aa11.84□□□□□ -0.51
VLDLR-203ENST00000382100 SMARCA2P51531 1590 aa11.84□□□□□ -0.51
VLDLR-203ENST00000382100 OFD1O75665 1012 aa11.84□□□□□ -0.51
VLDLR-203ENST00000382100 FILIP1LQ4L180 1135 aa11.84□□□□□ -0.51
VLDLR-203ENST00000382100 ANKRD18BA2A2Z9 1011 aa11.83□□□□□ -0.51
VLDLR-203ENST00000382100 ZBTB7CA1YPR0 619 aa11.83□□□□□ -0.52
VLDLR-203ENST00000382100 R3HCC1Q9Y3T6 440 aaKnown RBP11.83□□□□□ -0.52
VLDLR-203ENST00000382100 CETN2P41208 172 aa11.83□□□□□ -0.52
VLDLR-203ENST00000382100 CBFA2T2O43439 604 aa11.83□□□□□ -0.52
VLDLR-203ENST00000382100 CPLX1O14810 134 aa11.82□□□□□ -0.52
VLDLR-203ENST00000382100 KIAA1328Q86T90 577 aa11.82□□□□□ -0.52
VLDLR-203ENST00000382100 NASPP49321 788 aaPredicted RBP11.82□□□□□ -0.52
VLDLR-203ENST00000382100 KINO60870 393 aaKnown RBP11.82□□□□□ -0.52
VLDLR-203ENST00000382100 ZNF428Q96B54 188 aa11.82□□□□□ -0.52
VLDLR-203ENST00000382100 CWC22Q9HCG8 908 aaKnown RBP11.82□□□□□ -0.52
VLDLR-203ENST00000382100 PLEKHH1Q9ULM0 1364 aa11.82□□□□□ -0.52
VLDLR-203ENST00000382100 DHX29Q7Z478 1369 aaKnown RBP11.82□□□□□ -0.52
VLDLR-203ENST00000382100 ATAD2Q6PL18 1390 aa11.82□□□□□ -0.52
VLDLR-203ENST00000382100 PLEKHH2Q8IVE3 1493 aa11.81□□□□□ -0.52
VLDLR-203ENST00000382100 PLEKHG5O94827 1062 aa11.81□□□□□ -0.52
VLDLR-203ENST00000382100 IMMTQ16891 758 aaKnown RBP11.81□□□□□ -0.52
VLDLR-203ENST00000382100 GTPBP4Q9BZE4 634 aaKnown RBP11.81□□□□□ -0.52
VLDLR-203ENST00000382100 SEPT11Q9NVA2 429 aaKnown RBP11.81□□□□□ -0.52
VLDLR-203ENST00000382100 MARCH6O60337 910 aa11.81□□□□□ -0.52
VLDLR-203ENST00000382100 ANKRD1Q15327 319 aa11.81□□□□□ -0.52
VLDLR-203ENST00000382100 CCDC83Q8IWF9 413 aa11.81□□□□□ -0.52
VLDLR-203ENST00000382100 CCDC43Q96MW1 224 aaKnown RBP11.81□□□□□ -0.52
VLDLR-203ENST00000382100 EPS15P42566 896 aa11.8□□□□□ -0.52
VLDLR-203ENST00000382100 SWAP70Q9UH65 585 aa11.8□□□□□ -0.52
VLDLR-203ENST00000382100 SART3Q15020 963 aaKnown RBP11.8□□□□□ -0.52
VLDLR-203ENST00000382100 CHMP7Q8WUX9 453 aaPredicted RBP11.8□□□□□ -0.52
VLDLR-203ENST00000382100 CCAR2Q8N163 923 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms