RNA–Protein interactions for RNA: ENST00000381018.7

TRIM23-203, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-203ENST00000381018 KDM5AP29375 1690 aaKnown RBP15.9■□□□□ 0.14
TRIM23-203ENST00000381018 CDCA8Q53HL2 280 aa15.9■□□□□ 0.14
TRIM23-203ENST00000381018 SALL2Q9Y467 1007 aaPredicted RBP15.89■□□□□ 0.13
TRIM23-203ENST00000381018 EIF3AQ14152 1382 aaKnown RBP15.89■□□□□ 0.13
TRIM23-203ENST00000381018 IFT172Q9UG01 1749 aa15.89■□□□□ 0.13
TRIM23-203ENST00000381018 MAP3K4Q9Y6R4 1608 aa15.88■□□□□ 0.13
TRIM23-203ENST00000381018 ERICH6Q7L0X2 663 aa15.88■□□□□ 0.13
TRIM23-203ENST00000381018 KIDINS220Q9ULH0 1771 aa15.87■□□□□ 0.13
TRIM23-203ENST00000381018 KIF3BO15066 747 aa15.87■□□□□ 0.13
TRIM23-203ENST00000381018 KNSTRNQ9Y448 316 aa15.87■□□□□ 0.13
TRIM23-203ENST00000381018 EFCAB6Q5THR3 1501 aa15.87■□□□□ 0.13
TRIM23-203ENST00000381018 ABCA6Q8N139 1617 aa15.87■□□□□ 0.13
TRIM23-203ENST00000381018 MYOM2P54296 1465 aa15.86■□□□□ 0.13
TRIM23-203ENST00000381018 ASXL1Q8IXJ9 1541 aa15.86■□□□□ 0.13
TRIM23-203ENST00000381018 MYT1LQ9UL68 1186 aa15.86■□□□□ 0.13
TRIM23-203ENST00000381018 ASXL2Q76L83 1435 aa15.85■□□□□ 0.13
TRIM23-203ENST00000381018 PPRC1Q5VV67 1664 aaKnown RBP15.85■□□□□ 0.13
TRIM23-203ENST00000381018 MROH2AA6NES4 1674 aa15.84■□□□□ 0.13
TRIM23-203ENST00000381018 UGGT1Q9NYU2 1555 aa15.83■□□□□ 0.12
TRIM23-203ENST00000381018 CDCA7LQ96GN5 454 aa15.83■□□□□ 0.12
TRIM23-203ENST00000381018 CFAP74Q9C0B2 1584 aa15.83■□□□□ 0.12
TRIM23-203ENST00000381018 PPP2R1AP30153 589 aa15.82■□□□□ 0.12
TRIM23-203ENST00000381018 AMER1Q5JTC6 1135 aaPredicted RBP15.82■□□□□ 0.12
TRIM23-203ENST00000381018 ZNF518AQ6AHZ1 1483 aa15.82■□□□□ 0.12
TRIM23-203ENST00000381018 EXOC6Q8TAG9 804 aa15.82■□□□□ 0.12
TRIM23-203ENST00000381018 LMTK2Q8IWU2 1503 aa15.82■□□□□ 0.12
TRIM23-203ENST00000381018 NPC1L1Q9UHC9 1359 aa15.81■□□□□ 0.12
TRIM23-203ENST00000381018 MYO3AQ8NEV4 1616 aa15.81■□□□□ 0.12
TRIM23-203ENST00000381018 PIK3C2GO75747 1445 aa15.81■□□□□ 0.12
TRIM23-203ENST00000381018 SLC24A1O60721 1099 aa15.8■□□□□ 0.12
TRIM23-203ENST00000381018 WDR43Q15061 677 aaKnown RBP eCLIP15.8■□□□□ 0.12
TRIM23-203ENST00000381018 POTEDQ86YR6 584 aa15.8■□□□□ 0.12
TRIM23-203ENST00000381018 ADAMTS8Q9UP79 889 aa15.8■□□□□ 0.12
TRIM23-203ENST00000381018 ERVK-7P63135 1459 aa15.78■□□□□ 0.12
TRIM23-203ENST00000381018 NRXN1Q9ULB1 1477 aa15.78■□□□□ 0.12
TRIM23-203ENST00000381018 ADGRB3O60242 1522 aa15.77■□□□□ 0.12
TRIM23-203ENST00000381018 CFAP65Q6ZU64 1925 aaKnown RBP15.76■□□□□ 0.11
TRIM23-203ENST00000381018 PPLO60437 1756 aa15.76■□□□□ 0.11
TRIM23-203ENST00000381018 SETBP1Q9Y6X0 1596 aa15.76■□□□□ 0.11
TRIM23-203ENST00000381018 ADGRF5Q8IZF2 1346 aa15.76■□□□□ 0.11
TRIM23-203ENST00000381018 CFAP70Q5T0N1 1121 aa15.76■□□□□ 0.11
TRIM23-203ENST00000381018 ZC3H13Q5T200 1668 aaKnown RBP15.75■□□□□ 0.11
TRIM23-203ENST00000381018 HECW2Q9P2P5 1572 aa15.74■□□□□ 0.11
TRIM23-203ENST00000381018 ANP32AP39687 249 aaKnown RBP15.74■□□□□ 0.11
TRIM23-203ENST00000381018 PLEKHH1Q9ULM0 1364 aa15.73■□□□□ 0.11
TRIM23-203ENST00000381018 SBNO2Q9Y2G9 1366 aa15.73■□□□□ 0.11
TRIM23-203ENST00000381018 TCERG1O14776 1098 aaKnown RBP15.73■□□□□ 0.11
TRIM23-203ENST00000381018 NOP58Q9Y2X3 529 aaKnown RBP15.73■□□□□ 0.11
TRIM23-203ENST00000381018 POGZQ7Z3K3 1410 aa15.73■□□□□ 0.11
TRIM23-203ENST00000381018 FRMPD1Q5SYB0 1578 aa15.72■□□□□ 0.11
TRIM23-203ENST00000381018 MLH3Q9UHC1 1453 aa15.72■□□□□ 0.11
TRIM23-203ENST00000381018 NPM1P06748 294 aaKnown RBP eCLIP15.71■□□□□ 0.11
TRIM23-203ENST00000381018 QRICH2Q9H0J4 1663 aa15.71■□□□□ 0.11
TRIM23-203ENST00000381018 ZNF521Q96K83 1311 aa15.71■□□□□ 0.11
TRIM23-203ENST00000381018 NOS1P29475 1434 aa15.71■□□□□ 0.11
TRIM23-203ENST00000381018 PLIN1O60240 522 aa15.71■□□□□ 0.11
TRIM23-203ENST00000381018 CD109Q6YHK3 1445 aa15.7■□□□□ 0.1
TRIM23-203ENST00000381018 GOLGA2Q08379 1002 aa15.69■□□□□ 0.1
TRIM23-203ENST00000381018 CRBNQ96SW2 442 aa15.69■□□□□ 0.1
TRIM23-203ENST00000381018 NPATQ14207 1427 aa15.69■□□□□ 0.1
TRIM23-203ENST00000381018 DUSP27Q5VZP5 1158 aa15.69■□□□□ 0.1
TRIM23-203ENST00000381018 MS4A1P11836 297 aa15.68■□□□□ 0.1
TRIM23-203ENST00000381018 IPO9Q96P70 1041 aaKnown RBP15.68■□□□□ 0.1
TRIM23-203ENST00000381018 CAMSAP1Q5T5Y3 1602 aa15.68■□□□□ 0.1
TRIM23-203ENST00000381018 CENPJQ9HC77 1338 aaPredicted RBP15.67■□□□□ 0.1
TRIM23-203ENST00000381018 ABCC3O15438 1527 aa15.67■□□□□ 0.1
TRIM23-203ENST00000381018 CHGAP10645 457 aaKnown RBP15.66■□□□□ 0.1
TRIM23-203ENST00000381018 CARD14Q9BXL6 1004 aa15.65■□□□□ 0.1
TRIM23-203ENST00000381018 ADGRB1O14514 1584 aa15.65■□□□□ 0.1
TRIM23-203ENST00000381018 SLFN5Q08AF3 891 aa15.65■□□□□ 0.1
TRIM23-203ENST00000381018 SIGLEC1Q9BZZ2 1709 aa15.65■□□□□ 0.1
TRIM23-203ENST00000381018 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.64■□□□□ 0.09
TRIM23-203ENST00000381018 PIK3C2BO00750 1634 aa15.64■□□□□ 0.09
TRIM23-203ENST00000381018 USP32Q8NFA0 1604 aa15.64■□□□□ 0.09
TRIM23-203ENST00000381018 PAK3O75914 559 aaPredicted RBP15.63■□□□□ 0.09
TRIM23-203ENST00000381018 GGT6Q6P531 493 aa15.63■□□□□ 0.09
TRIM23-203ENST00000381018 CCDC146Q8IYE0 955 aa15.63■□□□□ 0.09
TRIM23-203ENST00000381018 RPGRIP1LQ68CZ1 1315 aa15.63■□□□□ 0.09
TRIM23-203ENST00000381018 PDE4AP27815 886 aa15.63■□□□□ 0.09
TRIM23-203ENST00000381018 NGEFQ8N5V2 710 aa15.63■□□□□ 0.09
TRIM23-203ENST00000381018 C14orf93Q9H972 538 aaKnown RBP15.63■□□□□ 0.09
TRIM23-203ENST00000381018 C20orf194Q5TEA3 1177 aa15.62■□□□□ 0.09
TRIM23-203ENST00000381018 OSCARQ8IYS5 282 aa15.62■□□□□ 0.09
TRIM23-203ENST00000381018 TRMT2AQ8IZ69 625 aaKnown RBP15.62■□□□□ 0.09
TRIM23-203ENST00000381018 POLR3AO14802 1390 aaPredicted RBP15.62■□□□□ 0.09
TRIM23-203ENST00000381018 NKTRP30414 1462 aaKnown RBP15.62■□□□□ 0.09
TRIM23-203ENST00000381018 NEO1Q92859 1461 aa15.62■□□□□ 0.09
TRIM23-203ENST00000381018 GLI2P10070 1586 aa15.62■□□□□ 0.09
TRIM23-203ENST00000381018 SHPRHQ149N8 1683 aa15.62■□□□□ 0.09
TRIM23-203ENST00000381018 APAF1O14727 1248 aa15.61■□□□□ 0.09
TRIM23-203ENST00000381018 BACH2Q9BYV9 841 aa15.61■□□□□ 0.09
TRIM23-203ENST00000381018 ZBTB47Q9UFB7 747 aaPredicted RBP15.61■□□□□ 0.09
TRIM23-203ENST00000381018 ARHGEF28Q8N1W1 1705 aaKnown RBP15.61■□□□□ 0.09
TRIM23-203ENST00000381018 NSD3Q9BZ95 1437 aa15.61■□□□□ 0.09
TRIM23-203ENST00000381018 TRAK1Q9UPV9 953 aa15.61■□□□□ 0.09
TRIM23-203ENST00000381018 DIP2CQ9Y2E4 1556 aa15.6■□□□□ 0.09
TRIM23-203ENST00000381018 KDM2BQ8NHM5 1336 aa15.59■□□□□ 0.09
TRIM23-203ENST00000381018 RICTORQ6R327 1708 aa15.59■□□□□ 0.09
TRIM23-203ENST00000381018 E9PSI1 815 aa15.59■□□□□ 0.09
TRIM23-203ENST00000381018 NEXMIFQ5QGS0 1516 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms