RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 EIF4G3O43432 1585 aaKnown RBP15.53■□□□□ 0.08
GABPB1-203ENST00000380877 ELL2O00472 640 aaPredicted RBP15.53■□□□□ 0.08
GABPB1-203ENST00000380877 NOP58Q9Y2X3 529 aaKnown RBP15.52■□□□□ 0.08
GABPB1-203ENST00000380877 RUNDC1Q96C34 613 aa15.52■□□□□ 0.08
GABPB1-203ENST00000380877 ADAMTS8Q9UP79 889 aa15.52■□□□□ 0.08
GABPB1-203ENST00000380877 MTHFSP49914 203 aa15.52■□□□□ 0.07
GABPB1-203ENST00000380877 PPP2R1AP30153 589 aa15.52■□□□□ 0.07
GABPB1-203ENST00000380877 RPRD2Q5VT52 1461 aaKnown RBP15.51■□□□□ 0.07
GABPB1-203ENST00000380877 EXOC6Q8TAG9 804 aa15.5■□□□□ 0.07
GABPB1-203ENST00000380877 RIPK4P57078 832 aa15.5■□□□□ 0.07
GABPB1-203ENST00000380877 PSME1Q06323 249 aa15.5■□□□□ 0.07
GABPB1-203ENST00000380877 GOLGA6L22H0YM25 854 aa15.49■□□□□ 0.07
GABPB1-203ENST00000380877 SLC4A10Q6U841 1118 aa15.49■□□□□ 0.07
GABPB1-203ENST00000380877 NUP160Q12769 1436 aa15.48■□□□□ 0.07
GABPB1-203ENST00000380877 THEMISQ8N1K5 641 aaPredicted RBP15.48■□□□□ 0.07
GABPB1-203ENST00000380877 PLCH2O75038 1416 aa15.48■□□□□ 0.07
GABPB1-203ENST00000380877 TSHZ2Q9NRE2 1034 aa15.48■□□□□ 0.07
GABPB1-203ENST00000380877 C11orf95C9JLR9 678 aaPredicted RBP15.47■□□□□ 0.07
GABPB1-203ENST00000380877 NPHP1O15259 732 aa15.47■□□□□ 0.07
GABPB1-203ENST00000380877 ABCA5Q8WWZ7 1642 aa15.47■□□□□ 0.07
GABPB1-203ENST00000380877 ZKSCAN2Q63HK3 967 aa15.47■□□□□ 0.07
GABPB1-203ENST00000380877 CRBNQ96SW2 442 aa15.47■□□□□ 0.07
GABPB1-203ENST00000380877 ZNF330Q9Y3S2 320 aaPredicted RBP15.46■□□□□ 0.07
GABPB1-203ENST00000380877 DENND4BO75064 1496 aaPredicted RBP15.46■□□□□ 0.07
GABPB1-203ENST00000380877 DHX29Q7Z478 1369 aaKnown RBP15.46■□□□□ 0.07
GABPB1-203ENST00000380877 KCNJ4P48050 445 aa15.46■□□□□ 0.07
GABPB1-203ENST00000380877 HMOX1P09601 288 aa15.46■□□□□ 0.06
GABPB1-203ENST00000380877 ANP32EQ9BTT0 268 aa15.45■□□□□ 0.06
GABPB1-203ENST00000380877 HSP90AB1P08238 724 aaKnown RBP15.45■□□□□ 0.06
GABPB1-203ENST00000380877 PNISRQ8TF01 805 aaKnown RBP15.45■□□□□ 0.06
GABPB1-203ENST00000380877 CDK19Q9BWU1 502 aa15.45■□□□□ 0.06
GABPB1-203ENST00000380877 COG6Q9Y2V7 657 aa15.45■□□□□ 0.06
GABPB1-203ENST00000380877 CCDC184Q52MB2 194 aa15.45■□□□□ 0.06
GABPB1-203ENST00000380877 DISP1Q96F81 1524 aa15.45■□□□□ 0.06
GABPB1-203ENST00000380877 ASXL2Q76L83 1435 aa15.45■□□□□ 0.06
GABPB1-203ENST00000380877 SLC26A8Q96RN1 970 aa15.44■□□□□ 0.06
GABPB1-203ENST00000380877 CABP1Q9NZU7 370 aa15.44■□□□□ 0.06
GABPB1-203ENST00000380877 HMMRO75330 724 aa15.44■□□□□ 0.06
GABPB1-203ENST00000380877 CFAP44Q96MT7 982 aa15.44■□□□□ 0.06
GABPB1-203ENST00000380877 NCLP19338 710 aaKnown RBP15.43■□□□□ 0.06
GABPB1-203ENST00000380877 NLRP6P59044 892 aa15.43■□□□□ 0.06
GABPB1-203ENST00000380877 POGZQ7Z3K3 1410 aa15.43■□□□□ 0.06
GABPB1-203ENST00000380877 TCP11L2Q8N4U5 519 aa15.43■□□□□ 0.06
GABPB1-203ENST00000380877 CFAP43Q8NDM7 1665 aa15.43■□□□□ 0.06
GABPB1-203ENST00000380877 TEFQ10587 303 aa15.43■□□□□ 0.06
GABPB1-203ENST00000380877 TCOF1Q13428 1488 aaKnown RBP15.43■□□□□ 0.06
GABPB1-203ENST00000380877 IDI1Q13907 227 aa15.42■□□□□ 0.06
GABPB1-203ENST00000380877 HSCBQ8IWL3 235 aa15.42■□□□□ 0.06
GABPB1-203ENST00000380877 ADGRF5Q8IZF2 1346 aa15.42■□□□□ 0.06
GABPB1-203ENST00000380877 CENPQQ7L2Z9 268 aaPredicted RBP15.42■□□□□ 0.06
GABPB1-203ENST00000380877 MAPKBP1O60336 1514 aa15.42■□□□□ 0.06
GABPB1-203ENST00000380877 C1orf141Q5JVX7 400 aa15.42■□□□□ 0.06
GABPB1-203ENST00000380877 CDCA7LQ96GN5 454 aa15.42■□□□□ 0.06
GABPB1-203ENST00000380877 NUTM2GQ5VZR2 741 aa15.41■□□□□ 0.06
GABPB1-203ENST00000380877 CCDC9Q9Y3X0 531 aaKnown RBP15.41■□□□□ 0.06
GABPB1-203ENST00000380877 ITSN2Q9NZM3 1697 aa15.41■□□□□ 0.06
GABPB1-203ENST00000380877 FBXO31Q5XUX0 539 aaPredicted RBP15.41■□□□□ 0.06
GABPB1-203ENST00000380877 HDAC5Q9UQL6 1122 aa15.41■□□□□ 0.06
GABPB1-203ENST00000380877 SYCP2Q9BX26 1530 aa15.4■□□□□ 0.06
GABPB1-203ENST00000380877 ATF3P18847 181 aa15.4■□□□□ 0.06
GABPB1-203ENST00000380877 PBRM1Q86U86 1689 aa15.39■□□□□ 0.05
GABPB1-203ENST00000380877 FGD1P98174 961 aa15.39■□□□□ 0.05
GABPB1-203ENST00000380877 WDR7Q9Y4E6 1490 aa15.39■□□□□ 0.05
GABPB1-203ENST00000380877 MCCP23508 829 aa15.39■□□□□ 0.05
GABPB1-203ENST00000380877 RTEL1-TNFRSF6BF6WH68 1400 aa15.38■□□□□ 0.05
GABPB1-203ENST00000380877 ATAD2Q6PL18 1390 aa15.38■□□□□ 0.05
GABPB1-203ENST00000380877 GNAI1P63096 354 aa15.38■□□□□ 0.05
GABPB1-203ENST00000380877 TRAPPC8Q9Y2L5 1435 aa15.37■□□□□ 0.05
GABPB1-203ENST00000380877 DZIP1LQ8IYY4 767 aaKnown RBP15.37■□□□□ 0.05
GABPB1-203ENST00000380877 KDM5BQ9UGL1 1544 aa15.37■□□□□ 0.05
GABPB1-203ENST00000380877 ZNF692Q9BU19 519 aaPredicted RBP15.37■□□□□ 0.05
GABPB1-203ENST00000380877 PROSER2Q86WR7 435 aaPredicted RBP15.36■□□□□ 0.05
GABPB1-203ENST00000380877 ABTB2Q8N961 1025 aa15.36■□□□□ 0.05
GABPB1-203ENST00000380877 PRKAR2BP31323 418 aa15.36■□□□□ 0.05
GABPB1-203ENST00000380877 ANKLE2Q86XL3 938 aa15.35■□□□□ 0.05
GABPB1-203ENST00000380877 DDX19BQ9UMR2 479 aa15.35■□□□□ 0.05
GABPB1-203ENST00000380877 TARBP1Q13395 1621 aaKnown RBP15.35■□□□□ 0.05
GABPB1-203ENST00000380877 ESCO1Q5FWF5 840 aa15.35■□□□□ 0.05
GABPB1-203ENST00000380877 DUOX2Q9NRD8 1548 aa15.35■□□□□ 0.05
GABPB1-203ENST00000380877 MFAP1P55081 439 aaKnown RBP15.34■□□□□ 0.05
GABPB1-203ENST00000380877 SPRYD3Q8NCJ5 442 aa15.34■□□□□ 0.05
GABPB1-203ENST00000380877 EVA1CP58658 441 aa15.34■□□□□ 0.05
GABPB1-203ENST00000380877 API5Q9BZZ5 524 aaKnown RBP15.34■□□□□ 0.05
GABPB1-203ENST00000380877 GPRASP1Q5JY77 1395 aa15.34■□□□□ 0.05
GABPB1-203ENST00000380877 KIAA1211Q6ZU35 1233 aa15.34■□□□□ 0.05
GABPB1-203ENST00000380877 FAM135AQ9P2D6 1515 aa15.34■□□□□ 0.05
GABPB1-203ENST00000380877 SAMD9Q5K651 1589 aa15.34■□□□□ 0.05
GABPB1-203ENST00000380877 WAPLQ7Z5K2 1190 aa15.33■□□□□ 0.04
GABPB1-203ENST00000380877 CCDC61Q9Y6R9 512 aa15.33■□□□□ 0.04
GABPB1-203ENST00000380877 KIF16BQ96L93 1317 aa15.33■□□□□ 0.04
GABPB1-203ENST00000380877 NOS1P29475 1434 aa15.33■□□□□ 0.04
GABPB1-203ENST00000380877 EIF2S2P20042 333 aaKnown RBP15.33■□□□□ 0.04
GABPB1-203ENST00000380877 CHMP3Q9Y3E7 222 aa15.33■□□□□ 0.04
GABPB1-203ENST00000380877 NSD3Q9BZ95 1437 aa15.33■□□□□ 0.04
GABPB1-203ENST00000380877 PPP6R1Q9UPN7 881 aa15.32■□□□□ 0.04
GABPB1-203ENST00000380877 ABCC2Q92887 1545 aa15.32■□□□□ 0.04
GABPB1-203ENST00000380877 TSPYL4Q9UJ04 414 aa15.32■□□□□ 0.04
GABPB1-203ENST00000380877 TPRNQ4KMQ1 711 aa15.32■□□□□ 0.04
GABPB1-203ENST00000380877 NECTIN2Q92692 538 aa15.31■□□□□ 0.04
GABPB1-203ENST00000380877 A2MP01023 1474 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms