RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 IFT172Q9UG01 1749 aa26.03■■□□□ 1.76
SHROOM1-202ENST00000378676 KIF1BO60333 1816 aa26.03■■□□□ 1.76
SHROOM1-202ENST00000378676 ABCA6Q8N139 1617 aa26.03■■□□□ 1.76
SHROOM1-202ENST00000378676 MROH2AA6NES4 1674 aa26.02■■□□□ 1.76
SHROOM1-202ENST00000378676 ASXL2Q76L83 1435 aa26.01■■□□□ 1.76
SHROOM1-202ENST00000378676 KDM5AP29375 1690 aaKnown RBP26.01■■□□□ 1.75
SHROOM1-202ENST00000378676 KANK1Q14678 1352 aa26.01■■□□□ 1.75
SHROOM1-202ENST00000378676 KIDINS220Q9ULH0 1771 aa26.01■■□□□ 1.75
SHROOM1-202ENST00000378676 NEURL4Q96JN8 1562 aa26.01■■□□□ 1.75
SHROOM1-202ENST00000378676 MAP3K4Q9Y6R4 1608 aa26■■□□□ 1.75
SHROOM1-202ENST00000378676 ERICH6Q7L0X2 663 aa26■■□□□ 1.75
SHROOM1-202ENST00000378676 KIF3BO15066 747 aa25.98■■□□□ 1.75
SHROOM1-202ENST00000378676 PPRC1Q5VV67 1664 aaKnown RBP25.98■■□□□ 1.75
SHROOM1-202ENST00000378676 EFCAB6Q5THR3 1501 aa25.97■■□□□ 1.75
SHROOM1-202ENST00000378676 ASXL1Q8IXJ9 1541 aa25.97■■□□□ 1.75
SHROOM1-202ENST00000378676 AMER1Q5JTC6 1135 aaPredicted RBP25.96■■□□□ 1.75
SHROOM1-202ENST00000378676 PPP2R1AP30153 589 aa25.95■■□□□ 1.74
SHROOM1-202ENST00000378676 KNSTRNQ9Y448 316 aa25.95■■□□□ 1.74
SHROOM1-202ENST00000378676 STAC3Q96MF2 364 aa25.95■■□□□ 1.74
SHROOM1-202ENST00000378676 MYT1LQ9UL68 1186 aa25.94■■□□□ 1.74
SHROOM1-202ENST00000378676 MYOM2P54296 1465 aa25.94■■□□□ 1.74
SHROOM1-202ENST00000378676 ADAMTS8Q9UP79 889 aa25.93■■□□□ 1.74
SHROOM1-202ENST00000378676 RIMBP3CA6NJZ7 1639 aa25.91■■□□□ 1.74
SHROOM1-202ENST00000378676 RIMBP3BA6NNM3 1639 aa25.91■■□□□ 1.74
SHROOM1-202ENST00000378676 RIMBP3Q9UFD9 1639 aa25.91■■□□□ 1.74
SHROOM1-202ENST00000378676 EIF3AQ14152 1382 aaKnown RBP25.91■■□□□ 1.74
SHROOM1-202ENST00000378676 CDCA8Q53HL2 280 aa25.9■■□□□ 1.74
SHROOM1-202ENST00000378676 PLIN1O60240 522 aa25.89■■□□□ 1.73
SHROOM1-202ENST00000378676 ERVK-7P63135 1459 aa25.88■■□□□ 1.73
SHROOM1-202ENST00000378676 PLEKHH1Q9ULM0 1364 aa25.88■■□□□ 1.73
SHROOM1-202ENST00000378676 ADGRF5Q8IZF2 1346 aa25.87■■□□□ 1.73
SHROOM1-202ENST00000378676 CFAP70Q5T0N1 1121 aa25.87■■□□□ 1.73
SHROOM1-202ENST00000378676 MYO3AQ8NEV4 1616 aa25.87■■□□□ 1.73
SHROOM1-202ENST00000378676 PIK3C2GO75747 1445 aa25.87■■□□□ 1.73
SHROOM1-202ENST00000378676 CFAP65Q6ZU64 1925 aaKnown RBP25.86■■□□□ 1.73
SHROOM1-202ENST00000378676 CYB5RLQ6IPT4 315 aa25.85■■□□□ 1.73
SHROOM1-202ENST00000378676 LMTK2Q8IWU2 1503 aa25.84■■□□□ 1.73
SHROOM1-202ENST00000378676 WDR43Q15061 677 aaKnown RBP eCLIP25.83■■□□□ 1.73
SHROOM1-202ENST00000378676 ADGRB3O60242 1522 aa25.83■■□□□ 1.72
SHROOM1-202ENST00000378676 NPC1L1Q9UHC9 1359 aa25.83■■□□□ 1.72
SHROOM1-202ENST00000378676 NRXN1Q9ULB1 1477 aa25.82■■□□□ 1.72
SHROOM1-202ENST00000378676 NOP58Q9Y2X3 529 aaKnown RBP25.82■■□□□ 1.72
SHROOM1-202ENST00000378676 ZNF518AQ6AHZ1 1483 aa25.82■■□□□ 1.72
SHROOM1-202ENST00000378676 PPLO60437 1756 aa25.81■■□□□ 1.72
SHROOM1-202ENST00000378676 PAK3O75914 559 aaPredicted RBP25.81■■□□□ 1.72
SHROOM1-202ENST00000378676 CRBNQ96SW2 442 aa25.81■■□□□ 1.72
SHROOM1-202ENST00000378676 ZC3H13Q5T200 1668 aaKnown RBP25.81■■□□□ 1.72
SHROOM1-202ENST00000378676 FRMPD1Q5SYB0 1578 aa25.8■■□□□ 1.72
SHROOM1-202ENST00000378676 ZNF521Q96K83 1311 aa25.79■■□□□ 1.72
SHROOM1-202ENST00000378676 NOS1P29475 1434 aa25.77■■□□□ 1.72
SHROOM1-202ENST00000378676 CFAP74Q9C0B2 1584 aa25.76■■□□□ 1.71
SHROOM1-202ENST00000378676 ANP32AP39687 249 aaKnown RBP25.76■■□□□ 1.71
SHROOM1-202ENST00000378676 DUSP27Q5VZP5 1158 aa25.76■■□□□ 1.71
SHROOM1-202ENST00000378676 SETBP1Q9Y6X0 1596 aa25.75■■□□□ 1.71
SHROOM1-202ENST00000378676 QRICH2Q9H0J4 1663 aa25.75■■□□□ 1.71
SHROOM1-202ENST00000378676 C20orf194Q5TEA3 1177 aa25.75■■□□□ 1.71
SHROOM1-202ENST00000378676 TCERG1O14776 1098 aaKnown RBP25.74■■□□□ 1.71
SHROOM1-202ENST00000378676 HECW2Q9P2P5 1572 aa25.73■■□□□ 1.71
SHROOM1-202ENST00000378676 CD109Q6YHK3 1445 aa25.73■■□□□ 1.71
SHROOM1-202ENST00000378676 POGZQ7Z3K3 1410 aa25.73■■□□□ 1.71
SHROOM1-202ENST00000378676 IPO9Q96P70 1041 aaKnown RBP25.73■■□□□ 1.71
SHROOM1-202ENST00000378676 CARD14Q9BXL6 1004 aa25.72■■□□□ 1.71
SHROOM1-202ENST00000378676 NPATQ14207 1427 aa25.72■■□□□ 1.71
SHROOM1-202ENST00000378676 CCDC146Q8IYE0 955 aa25.71■■□□□ 1.71
SHROOM1-202ENST00000378676 SBNO2Q9Y2G9 1366 aa25.69■■□□□ 1.7
SHROOM1-202ENST00000378676 GOLGA2Q08379 1002 aa25.69■■□□□ 1.7
SHROOM1-202ENST00000378676 SIGLEC1Q9BZZ2 1709 aa25.68■■□□□ 1.7
SHROOM1-202ENST00000378676 SKAP1Q86WV1 359 aa25.68■■□□□ 1.7
SHROOM1-202ENST00000378676 ADGRB1O14514 1584 aa25.67■■□□□ 1.7
SHROOM1-202ENST00000378676 MLH3Q9UHC1 1453 aa25.67■■□□□ 1.7
SHROOM1-202ENST00000378676 CHGAP10645 457 aaKnown RBP25.67■■□□□ 1.7
SHROOM1-202ENST00000378676 PDE4AP27815 886 aa25.67■■□□□ 1.7
SHROOM1-202ENST00000378676 CAMSAP1Q5T5Y3 1602 aa25.66■■□□□ 1.7
SHROOM1-202ENST00000378676 SHPRHQ149N8 1683 aa25.66■■□□□ 1.7
SHROOM1-202ENST00000378676 ABCC3O15438 1527 aa25.65■■□□□ 1.7
SHROOM1-202ENST00000378676 SLFN5Q08AF3 891 aa25.65■■□□□ 1.7
SHROOM1-202ENST00000378676 CENPJQ9HC77 1338 aaPredicted RBP25.64■■□□□ 1.7
SHROOM1-202ENST00000378676 SLC24A1O60721 1099 aa25.64■■□□□ 1.7
SHROOM1-202ENST00000378676 MS4A1P11836 297 aa25.64■■□□□ 1.7
SHROOM1-202ENST00000378676 BACH2Q9BYV9 841 aa25.63■■□□□ 1.69
SHROOM1-202ENST00000378676 APAF1O14727 1248 aa25.62■■□□□ 1.69
SHROOM1-202ENST00000378676 SPINK5Q9NQ38 1064 aaPredicted RBP25.62■■□□□ 1.69
SHROOM1-202ENST00000378676 GGT6Q6P531 493 aa25.61■■□□□ 1.69
SHROOM1-202ENST00000378676 NPM2Q86SE8 214 aaKnown RBP25.61■■□□□ 1.69
SHROOM1-202ENST00000378676 TRMT2AQ8IZ69 625 aaKnown RBP25.61■■□□□ 1.69
SHROOM1-202ENST00000378676 TRAK1Q9UPV9 953 aa25.6■■□□□ 1.69
SHROOM1-202ENST00000378676 NSD3Q9BZ95 1437 aa25.6■■□□□ 1.69
SHROOM1-202ENST00000378676 KDM2BQ8NHM5 1336 aa25.6■■□□□ 1.69
SHROOM1-202ENST00000378676 PIK3C2BO00750 1634 aa25.59■■□□□ 1.69
SHROOM1-202ENST00000378676 GLI2P10070 1586 aa25.59■■□□□ 1.69
SHROOM1-202ENST00000378676 ZBTB47Q9UFB7 747 aaPredicted RBP25.59■■□□□ 1.69
SHROOM1-202ENST00000378676 ARHGEF28Q8N1W1 1705 aaKnown RBP25.59■■□□□ 1.69
SHROOM1-202ENST00000378676 NKTRP30414 1462 aaKnown RBP25.58■■□□□ 1.69
SHROOM1-202ENST00000378676 NBR1Q14596 966 aa25.57■■□□□ 1.68
SHROOM1-202ENST00000378676 C14orf93Q9H972 538 aaKnown RBP25.57■■□□□ 1.68
SHROOM1-202ENST00000378676 USP32Q8NFA0 1604 aa25.57■■□□□ 1.68
SHROOM1-202ENST00000378676 DMRT2Q9Y5R5 561 aa25.56■■□□□ 1.68
SHROOM1-202ENST00000378676 POLR3AO14802 1390 aaPredicted RBP25.56■■□□□ 1.68
SHROOM1-202ENST00000378676 NEO1Q92859 1461 aa25.56■■□□□ 1.68
SHROOM1-202ENST00000378676 TMEM132EQ6IEE7 984 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms