RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 GPRASP1Q5JY77 1395 aa20.31■□□□□ 0.84
FXN-201ENST00000377270 TMC1Q8TDI8 760 aa20.3■□□□□ 0.84
FXN-201ENST00000377270 FANCAO15360 1455 aa20.3■□□□□ 0.84
FXN-201ENST00000377270 ZFYVE16Q7Z3T8 1539 aa20.29■□□□□ 0.84
FXN-201ENST00000377270 NPM2Q86SE8 214 aaKnown RBP20.27■□□□□ 0.84
FXN-201ENST00000377270 PNISRQ8TF01 805 aaKnown RBP20.26■□□□□ 0.83
FXN-201ENST00000377270 SMG6Q86US8 1419 aaKnown RBP20.26■□□□□ 0.83
FXN-201ENST00000377270 RALBP1Q15311 655 aa20.25■□□□□ 0.83
FXN-201ENST00000377270 RNF123Q5XPI4 1314 aa20.25■□□□□ 0.83
FXN-201ENST00000377270 EIF2AK4Q9P2K8 1649 aaKnown RBP20.24■□□□□ 0.83
FXN-201ENST00000377270 TESK2Q96S53 571 aa20.24■□□□□ 0.83
FXN-201ENST00000377270 PNNQ9H307 717 aaKnown RBP20.24■□□□□ 0.83
FXN-201ENST00000377270 ASXL2Q76L83 1435 aa20.24■□□□□ 0.83
FXN-201ENST00000377270 SCAPERQ9BY12 1400 aa20.24■□□□□ 0.83
FXN-201ENST00000377270 ABCA9Q8IUA7 1624 aa20.24■□□□□ 0.83
FXN-201ENST00000377270 PRDM15P57071 1507 aaPredicted RBP20.24■□□□□ 0.83
FXN-201ENST00000377270 E9PCH4 1651 aa20.23■□□□□ 0.83
FXN-201ENST00000377270 MYBBP1AQ9BQG0 1328 aaKnown RBP20.23■□□□□ 0.83
FXN-201ENST00000377270 KIF3BO15066 747 aa20.23■□□□□ 0.83
FXN-201ENST00000377270 ADGRL1O94910 1474 aa20.23■□□□□ 0.83
FXN-201ENST00000377270 ATP7AQ04656 1500 aa20.23■□□□□ 0.83
FXN-201ENST00000377270 KTN1Q86UP2 1357 aaKnown RBP20.23■□□□□ 0.83
FXN-201ENST00000377270 LAMC1P11047 1609 aa20.22■□□□□ 0.83
FXN-201ENST00000377270 NFKBIBQ15653 356 aa20.22■□□□□ 0.83
FXN-201ENST00000377270 CENPJQ9HC77 1338 aaPredicted RBP20.21■□□□□ 0.83
FXN-201ENST00000377270 IPO4Q8TEX9 1081 aaKnown RBP20.21■□□□□ 0.83
FXN-201ENST00000377270 STAC3Q96MF2 364 aa20.21■□□□□ 0.83
FXN-201ENST00000377270 KANK1Q14678 1352 aa20.21■□□□□ 0.83
FXN-201ENST00000377270 DISP3Q9P2K9 1392 aa20.21■□□□□ 0.83
FXN-201ENST00000377270 SENP3-EIF4A1A0A087X0R7 540 aa20.21■□□□□ 0.83
FXN-201ENST00000377270 DHX37Q8IY37 1157 aaKnown RBP20.2■□□□□ 0.82
FXN-201ENST00000377270 CANXP27824 592 aaKnown RBP20.2■□□□□ 0.82
FXN-201ENST00000377270 BRD4O60885 1362 aaPredicted RBP20.2■□□□□ 0.82
FXN-201ENST00000377270 COL17A1Q9UMD9 1497 aaPredicted RBP20.19■□□□□ 0.82
FXN-201ENST00000377270 INO80Q9ULG1 1556 aaPredicted RBP20.19■□□□□ 0.82
FXN-201ENST00000377270 NPM1P06748 294 aaKnown RBP eCLIP20.19■□□□□ 0.82
FXN-201ENST00000377270 TMF1P82094 1093 aa20.19■□□□□ 0.82
FXN-201ENST00000377270 TRPM2O94759 1503 aa20.18■□□□□ 0.82
FXN-201ENST00000377270 PTPRTO14522 1441 aa20.18■□□□□ 0.82
FXN-201ENST00000377270 PER1O15534 1290 aaPredicted RBP20.18■□□□□ 0.82
FXN-201ENST00000377270 OSCARQ8IYS5 282 aa20.18■□□□□ 0.82
FXN-201ENST00000377270 NUDCQ9Y266 331 aa20.18■□□□□ 0.82
FXN-201ENST00000377270 DEPDC5O75140 1603 aa20.18■□□□□ 0.82
FXN-201ENST00000377270 PDCL3Q9H2J4 239 aa20.17■□□□□ 0.82
FXN-201ENST00000377270 SPHKAPQ2M3C7 1700 aa20.15■□□□□ 0.82
FXN-201ENST00000377270 PANK3Q9H999 370 aa20.15■□□□□ 0.82
FXN-201ENST00000377270 TET3O43151 1660 aa20.14■□□□□ 0.82
FXN-201ENST00000377270 NLRP13Q86W25 1043 aa20.14■□□□□ 0.81
FXN-201ENST00000377270 LRPPRCP42704 1394 aaKnown RBP20.14■□□□□ 0.81
FXN-201ENST00000377270 PARD3Q8TEW0 1356 aa20.14■□□□□ 0.81
FXN-201ENST00000377270 CLTCL1P53675 1640 aa20.13■□□□□ 0.81
FXN-201ENST00000377270 TCERG1O14776 1098 aaKnown RBP20.13■□□□□ 0.81
FXN-201ENST00000377270 CC2D1BQ5T0F9 858 aaKnown RBP20.12■□□□□ 0.81
FXN-201ENST00000377270 MADDQ8WXG6 1647 aa20.12■□□□□ 0.81
FXN-201ENST00000377270 RNF17Q9BXT8 1623 aaKnown RBP20.12■□□□□ 0.81
FXN-201ENST00000377270 VWDEQ8N2E2 1590 aa20.12■□□□□ 0.81
FXN-201ENST00000377270 CEP152O94986 1710 aa20.12■□□□□ 0.81
FXN-201ENST00000377270 PDE4AP27815 886 aa20.1■□□□□ 0.81
FXN-201ENST00000377270 BRD2P25440 801 aaKnown RBP20.09■□□□□ 0.81
FXN-201ENST00000377270 CLCN1P35523 988 aa20.07■□□□□ 0.8
FXN-201ENST00000377270 CHMP4AQ9BY43 222 aa20.07■□□□□ 0.8
FXN-201ENST00000377270 BACH2Q9BYV9 841 aa20.07■□□□□ 0.8
FXN-201ENST00000377270 MROH1Q8NDA8 1641 aa20.06■□□□□ 0.8
FXN-201ENST00000377270 KIDINS220Q9ULH0 1771 aa20.06■□□□□ 0.8
FXN-201ENST00000377270 ZNF518AQ6AHZ1 1483 aa20.06■□□□□ 0.8
FXN-201ENST00000377270 CD109Q6YHK3 1445 aa20.06■□□□□ 0.8
FXN-201ENST00000377270 SCAF11Q99590 1463 aaKnown RBP20.05■□□□□ 0.8
FXN-201ENST00000377270 MS4A1P11836 297 aa20.04■□□□□ 0.8
FXN-201ENST00000377270 IQGAP1P46940 1657 aa20.04■□□□□ 0.8
FXN-201ENST00000377270 UGGT1Q9NYU2 1555 aa20.03■□□□□ 0.8
FXN-201ENST00000377270 DDRGK1Q96HY6 314 aa20.02■□□□□ 0.8
FXN-201ENST00000377270 CDCA8Q53HL2 280 aa20.02■□□□□ 0.79
FXN-201ENST00000377270 CFAP70Q5T0N1 1121 aa20.01■□□□□ 0.79
FXN-201ENST00000377270 ZFP91Q96JP5 570 aaPredicted RBP20■□□□□ 0.79
FXN-201ENST00000377270 KNSTRNQ9Y448 316 aa20■□□□□ 0.79
FXN-201ENST00000377270 EFCAB6Q5THR3 1501 aa20■□□□□ 0.79
FXN-201ENST00000377270 ZHX1Q9UKY1 873 aaPredicted RBP20■□□□□ 0.79
FXN-201ENST00000377270 ADGRF5Q8IZF2 1346 aa19.99■□□□□ 0.79
FXN-201ENST00000377270 GGT6Q6P531 493 aa19.99■□□□□ 0.79
FXN-201ENST00000377270 EIF3AQ14152 1382 aaKnown RBP19.98■□□□□ 0.79
FXN-201ENST00000377270 POGZQ7Z3K3 1410 aa19.98■□□□□ 0.79
FXN-201ENST00000377270 CHGAP10645 457 aaKnown RBP19.97■□□□□ 0.79
FXN-201ENST00000377270 NEURL4Q96JN8 1562 aa19.97■□□□□ 0.79
FXN-201ENST00000377270 PPRC1Q5VV67 1664 aaKnown RBP19.97■□□□□ 0.79
FXN-201ENST00000377270 PLCD3Q8N3E9 789 aa19.97■□□□□ 0.79
FXN-201ENST00000377270 KIF1BO60333 1816 aa19.96■□□□□ 0.79
FXN-201ENST00000377270 LMTK2Q8IWU2 1503 aa19.95■□□□□ 0.78
FXN-201ENST00000377270 CFAP74Q9C0B2 1584 aa19.95■□□□□ 0.78
FXN-201ENST00000377270 MLH3Q9UHC1 1453 aa19.95■□□□□ 0.78
FXN-201ENST00000377270 MYOM2P54296 1465 aa19.94■□□□□ 0.78
FXN-201ENST00000377270 MAP3K4Q9Y6R4 1608 aa19.94■□□□□ 0.78
FXN-201ENST00000377270 KIAA1210Q9ULL0 1709 aa19.94■□□□□ 0.78
FXN-201ENST00000377270 FRAT2O75474 233 aaPredicted RBP19.94■□□□□ 0.78
FXN-201ENST00000377270 TPM2P07951 284 aa19.93■□□□□ 0.78
FXN-201ENST00000377270 AMER1Q5JTC6 1135 aaPredicted RBP19.93■□□□□ 0.78
FXN-201ENST00000377270 FTSJ3Q8IY81 847 aaKnown RBP19.93■□□□□ 0.78
FXN-201ENST00000377270 EXOC6Q8TAG9 804 aa19.92■□□□□ 0.78
FXN-201ENST00000377270 RAPGEF3O95398 923 aa19.92■□□□□ 0.78
FXN-201ENST00000377270 RRP1P56182 461 aaKnown RBP19.92■□□□□ 0.78
FXN-201ENST00000377270 PDE3BQ13370 1112 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms